RNA–Protein interactions for RNA: ENST00000548436.5

PRPF40B-208, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 2,059 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-208ENST00000548436 PTOV1Q86YD1 416 aa17.89■□□□□ 0.45
PRPF40B-208ENST00000548436 TRAPPC5Q8IUR0 188 aa17.89■□□□□ 0.45
PRPF40B-208ENST00000548436 C12orf76Q8N812 135 aaPredicted RBP17.89■□□□□ 0.45
PRPF40B-208ENST00000548436 PNPT1Q8TCS8 783 aaKnown RBP17.89■□□□□ 0.45
PRPF40B-208ENST00000548436 CHTF18Q8WVB6 975 aa17.89■□□□□ 0.45
PRPF40B-208ENST00000548436 METTL2AQ96IZ6 378 aaKnown RBP17.89■□□□□ 0.45
PRPF40B-208ENST00000548436 ING2Q9H160 280 aa17.89■□□□□ 0.45
PRPF40B-208ENST00000548436 PCDHGA8Q9Y5G5 932 aa17.89■□□□□ 0.45
PRPF40B-208ENST00000548436 KCNE2Q9Y6J6 123 aa17.89■□□□□ 0.45
PRPF40B-208ENST00000548436 E2F6O75461 281 aa17.88■□□□□ 0.45
PRPF40B-208ENST00000548436 MYO1DO94832 1006 aa17.88■□□□□ 0.45
PRPF40B-208ENST00000548436 ANXA4P09525 319 aaPredicted RBP17.88■□□□□ 0.45
PRPF40B-208ENST00000548436 MYOGP15173 224 aa17.88■□□□□ 0.45
PRPF40B-208ENST00000548436 MAPK9P45984 424 aa17.88■□□□□ 0.45
PRPF40B-208ENST00000548436 RPS13P62277 151 aaKnown RBP17.88■□□□□ 0.45
PRPF40B-208ENST00000548436 TBPL1P62380 186 aa17.88■□□□□ 0.45
PRPF40B-208ENST00000548436 KCNAB2Q13303 367 aa17.88■□□□□ 0.45
PRPF40B-208ENST00000548436 VMACQ2NL98 169 aa17.88■□□□□ 0.45
PRPF40B-208ENST00000548436 HKDC1Q2TB90 917 aa17.88■□□□□ 0.45
PRPF40B-208ENST00000548436 TTC23Q5W5X9 447 aa17.88■□□□□ 0.45
PRPF40B-208ENST00000548436 ZDHHC21Q8IVQ6 265 aa17.88■□□□□ 0.45
PRPF40B-208ENST00000548436 C8orf59Q8N0T1 100 aaPredicted RBP17.88■□□□□ 0.45
PRPF40B-208ENST00000548436 GPR156Q8NFN8 814 aa17.88■□□□□ 0.45
PRPF40B-208ENST00000548436 NUS1Q96E22 293 aa17.88■□□□□ 0.45
PRPF40B-208ENST00000548436 DPH2Q9BQC3 489 aaPredicted RBP17.88■□□□□ 0.45
PRPF40B-208ENST00000548436 DUSP26Q9BV47 211 aa17.88■□□□□ 0.45
PRPF40B-208ENST00000548436 CXorf21Q9HAI6 301 aa17.88■□□□□ 0.45
PRPF40B-208ENST00000548436 TMEFF2Q9UIK5 374 aaPredicted RBP17.88■□□□□ 0.45
PRPF40B-208ENST00000548436 SAMD4AQ9UPU9 718 aaKnown RBP17.88■□□□□ 0.45
PRPF40B-208ENST00000548436 HEMK1Q9Y5R4 338 aaPredicted RBP17.88■□□□□ 0.45
PRPF40B-208ENST00000548436 DENND4AQ7Z401 1863 aa17.88■□□□□ 0.45
PRPF40B-208ENST00000548436 ALPK3Q96L96 1907 aa17.88■□□□□ 0.45
PRPF40B-208ENST00000548436 HS6ST1O60243 411 aa17.87■□□□□ 0.45
PRPF40B-208ENST00000548436 MMP20O60882 483 aa17.87■□□□□ 0.45
PRPF40B-208ENST00000548436 C6P13671 934 aa17.87■□□□□ 0.45
PRPF40B-208ENST00000548436 NPPBP16860 134 aa17.87■□□□□ 0.45
PRPF40B-208ENST00000548436 HNRNPA1L2Q32P51 320 aaKnown RBP17.87■□□□□ 0.45
PRPF40B-208ENST00000548436 RAET1GQ6H3X3 334 aa17.87■□□□□ 0.45
PRPF40B-208ENST00000548436 ZNF547Q8IVP9 402 aa17.87■□□□□ 0.45
PRPF40B-208ENST00000548436 SYTL1Q8IYJ3 562 aa17.87■□□□□ 0.45
PRPF40B-208ENST00000548436 FBXO15Q8NCQ5 510 aaPredicted RBP17.87■□□□□ 0.45
PRPF40B-208ENST00000548436 POP5Q969H6 163 aaKnown RBP17.87■□□□□ 0.45
PRPF40B-208ENST00000548436 ATXN10Q9UBB4 475 aa17.87■□□□□ 0.45
PRPF40B-208ENST00000548436 ABCG2Q9UNQ0 655 aa17.87■□□□□ 0.45
PRPF40B-208ENST00000548436 IL7RP16871 459 aa17.87■□□□□ 0.45
PRPF40B-208ENST00000548436 GPR1P46091 355 aa17.87■□□□□ 0.45
PRPF40B-208ENST00000548436 EPS8Q12929 822 aa17.87■□□□□ 0.45
PRPF40B-208ENST00000548436 TSTA3Q13630 321 aaPredicted RBP17.87■□□□□ 0.45
PRPF40B-208ENST00000548436 NEDD8Q15843 81 aa17.87■□□□□ 0.45
PRPF40B-208ENST00000548436 CPZQ66K79 652 aa17.87■□□□□ 0.45
PRPF40B-208ENST00000548436 MED27Q6P2C8 311 aa17.87■□□□□ 0.45
PRPF40B-208ENST00000548436 PGBD3Q8N328 593 aa17.87■□□□□ 0.45
PRPF40B-208ENST00000548436 ZNF555Q8NEP9 628 aa17.87■□□□□ 0.45
PRPF40B-208ENST00000548436 TMIEQ8NEW7 156 aa17.87■□□□□ 0.45
PRPF40B-208ENST00000548436 OR8D1Q8WZ84 308 aa17.87■□□□□ 0.45
PRPF40B-208ENST00000548436 SMG7Q92540 1137 aaKnown RBP17.87■□□□□ 0.45
PRPF40B-208ENST00000548436 C12orf43Q96C57 262 aaKnown RBP17.87■□□□□ 0.45
PRPF40B-208ENST00000548436 FAM129BQ96TA1 746 aa17.87■□□□□ 0.45
PRPF40B-208ENST00000548436 OCEL1Q9H607 264 aa17.87■□□□□ 0.45
PRPF40B-208ENST00000548436 PRM3Q9NNZ6 103 aa17.87■□□□□ 0.45
PRPF40B-208ENST00000548436 PCDHB11Q9Y5F2 797 aa17.87■□□□□ 0.45
PRPF40B-208ENST00000548436 C5orf67F2Z3F1 127 aa17.86■□□□□ 0.45
PRPF40B-208ENST00000548436 PAPLNO95428 1278 aa17.86■□□□□ 0.45
PRPF40B-208ENST00000548436 ADRB3P13945 408 aa17.86■□□□□ 0.45
PRPF40B-208ENST00000548436 HOXB6P17509 224 aaKnown RBP17.86■□□□□ 0.45
PRPF40B-208ENST00000548436 EEF1B2P24534 225 aaKnown RBP17.86■□□□□ 0.45
PRPF40B-208ENST00000548436 ASMTP46597 345 aa17.86■□□□□ 0.45
PRPF40B-208ENST00000548436 CPTPQ5TA50 214 aa17.86■□□□□ 0.45
PRPF40B-208ENST00000548436 CAPN13Q6MZZ7 669 aaPredicted RBP17.86■□□□□ 0.45
PRPF40B-208ENST00000548436 ZNF773Q6PK81 442 aa17.86■□□□□ 0.45
PRPF40B-208ENST00000548436 DCP2Q8IU60 420 aaKnown RBP17.86■□□□□ 0.45
PRPF40B-208ENST00000548436 SGCDQ92629 289 aa17.86■□□□□ 0.45
PRPF40B-208ENST00000548436 ERLEC1Q96DZ1 483 aa17.86■□□□□ 0.45
PRPF40B-208ENST00000548436 BARD1Q99728 777 aaKnown RBP17.86■□□□□ 0.45
PRPF40B-208ENST00000548436 TPT1P8Q9HAU6 139 aa17.86■□□□□ 0.45
PRPF40B-208ENST00000548436 IL1RAPQ9NPH3 570 aa17.86■□□□□ 0.45
PRPF40B-208ENST00000548436 EXO1Q9UQ84 846 aaKnown RBP17.86■□□□□ 0.45
PRPF40B-208ENST00000548436 EDDM13A0A1B0GTR0 161 aa17.86■□□□□ 0.45
PRPF40B-208ENST00000548436 IDSP22304 550 aa17.86■□□□□ 0.45
PRPF40B-208ENST00000548436 CRHBPP24387 322 aa17.86■□□□□ 0.45
PRPF40B-208ENST00000548436 TIA1P31483 386 aaKnown RBP eCLIP17.86■□□□□ 0.45
PRPF40B-208ENST00000548436 KDELR2P33947 212 aa17.86■□□□□ 0.45
PRPF40B-208ENST00000548436 ELP6Q0PNE2 266 aa17.86■□□□□ 0.45
PRPF40B-208ENST00000548436 STARD3Q14849 445 aa17.86■□□□□ 0.45
PRPF40B-208ENST00000548436 MEP1AQ16819 746 aa17.86■□□□□ 0.45
PRPF40B-208ENST00000548436 CTU2Q2VPK5 515 aaKnown RBP17.86■□□□□ 0.45
PRPF40B-208ENST00000548436 SPIN4Q56A73 249 aa17.86■□□□□ 0.45
PRPF40B-208ENST00000548436 FAM78AQ5JUQ0 283 aa17.86■□□□□ 0.45
PRPF40B-208ENST00000548436 TMC5Q6UXY8 1006 aa17.86■□□□□ 0.45
PRPF40B-208ENST00000548436 VTCN1Q7Z7D3 282 aa17.86■□□□□ 0.45
PRPF40B-208ENST00000548436 HIPK1Q86Z02 1210 aa17.86■□□□□ 0.45
PRPF40B-208ENST00000548436 ARL10Q8N8L6 244 aa17.86■□□□□ 0.45
PRPF40B-208ENST00000548436 STARD8Q92502 1023 aa17.86■□□□□ 0.45
PRPF40B-208ENST00000548436 ZCCHC2Q9C0B9 1178 aaKnown RBP17.86■□□□□ 0.45
PRPF40B-208ENST00000548436 MCOLN1Q9GZU1 580 aa17.86■□□□□ 0.45
PRPF40B-208ENST00000548436 ADNPQ9H2P0 1102 aa17.86■□□□□ 0.45
PRPF40B-208ENST00000548436 LOC100130705A0A1B0GUX0 176 aa17.85■□□□□ 0.45
PRPF40B-208ENST00000548436 GNG14A0A1W2PPG7 69 aa17.85■□□□□ 0.45
PRPF40B-208ENST00000548436 C1orf226A1L170 272 aa17.85■□□□□ 0.45
PRPF40B-208ENST00000548436 ANTXRLA6NF34 631 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms