RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-222ENST00000545308 TRIML1Q8N9V2 468 aa3.84□□□□□ -1.79
SNHG1-222ENST00000545308 L3MBTL4Q8NA19 623 aa3.84□□□□□ -1.79
SNHG1-222ENST00000545308 THAP8Q8NA92 274 aa3.84□□□□□ -1.79
SNHG1-222ENST00000545308 OR13J1Q8NGT2 312 aa3.84□□□□□ -1.79
SNHG1-222ENST00000545308 ST7LQ8TDW4 575 aa3.84□□□□□ -1.79
SNHG1-222ENST00000545308 FAM216AQ8WUB2 273 aa3.84□□□□□ -1.79
SNHG1-222ENST00000545308 SNRNP40Q96DI7 357 aaKnown RBP3.84□□□□□ -1.79
SNHG1-222ENST00000545308 MTBPQ96DY7 904 aa3.84□□□□□ -1.79
SNHG1-222ENST00000545308 SGF29Q96ES7 293 aa3.84□□□□□ -1.79
SNHG1-222ENST00000545308 TMEM19Q96HH6 336 aa3.84□□□□□ -1.79
SNHG1-222ENST00000545308 OXNAD1Q96HP4 312 aaPredicted RBP3.84□□□□□ -1.79
SNHG1-222ENST00000545308 TEX13AQ9BXU3 409 aaPredicted RBP3.84□□□□□ -1.79
SNHG1-222ENST00000545308 VPS33BQ9H267 617 aa3.84□□□□□ -1.79
SNHG1-222ENST00000545308 ARRDC1-AS1Q9H2J1 176 aa3.84□□□□□ -1.79
SNHG1-222ENST00000545308 SRD5A3Q9H8P0 318 aa3.84□□□□□ -1.79
SNHG1-222ENST00000545308 Q9H8V8 135 aa3.84□□□□□ -1.79
SNHG1-222ENST00000545308 CYP39A1Q9NYL5 469 aa3.84□□□□□ -1.79
SNHG1-222ENST00000545308 SMARCAL1Q9NZC9 954 aa3.84□□□□□ -1.79
SNHG1-222ENST00000545308 ZNF224Q9NZL3 707 aa3.84□□□□□ -1.79
SNHG1-222ENST00000545308 NARFQ9UHQ1 456 aa3.84□□□□□ -1.79
SNHG1-222ENST00000545308 APPL1Q9UKG1 709 aa3.84□□□□□ -1.79
SNHG1-222ENST00000545308 ODF2LQ9ULJ1 636 aa3.84□□□□□ -1.79
SNHG1-222ENST00000545308 USP42Q9H9J4 1324 aaKnown RBP3.84□□□□□ -1.79
SNHG1-222ENST00000545308 DLEC1Q9Y238 1755 aa3.84□□□□□ -1.8
SNHG1-222ENST00000545308 CLEC18AA5D8T8 446 aa3.83□□□□□ -1.8
SNHG1-222ENST00000545308 CASTOR2A6NHX0 329 aa3.83□□□□□ -1.8
SNHG1-222ENST00000545308 SOCS2O14508 198 aa3.83□□□□□ -1.8
SNHG1-222ENST00000545308 PGRMC2O15173 223 aa3.83□□□□□ -1.8
SNHG1-222ENST00000545308 CTDSPLO15194 276 aa3.83□□□□□ -1.8
SNHG1-222ENST00000545308 TTI1O43156 1089 aa3.83□□□□□ -1.8
SNHG1-222ENST00000545308 BUD23O43709 281 aaKnown RBP3.83□□□□□ -1.8
SNHG1-222ENST00000545308 TOMM40O96008 361 aa3.83□□□□□ -1.8
SNHG1-222ENST00000545308 GLUD1P00367 558 aa3.83□□□□□ -1.8
SNHG1-222ENST00000545308 CSF2RAP15509 400 aa3.83□□□□□ -1.8
SNHG1-222ENST00000545308 VCLP18206 1134 aa3.83□□□□□ -1.8
SNHG1-222ENST00000545308 SLC6A6P31641 620 aa3.83□□□□□ -1.8
SNHG1-222ENST00000545308 HSD17B3P37058 310 aa3.83□□□□□ -1.8
SNHG1-222ENST00000545308 CD86P42081 329 aa3.83□□□□□ -1.8
SNHG1-222ENST00000545308 GLUD2P49448 558 aa3.83□□□□□ -1.8
SNHG1-222ENST00000545308 RELQ04864 619 aaPredicted RBP3.83□□□□□ -1.8
SNHG1-222ENST00000545308 EGR4Q05215 589 aa3.83□□□□□ -1.8
SNHG1-222ENST00000545308 ZNF415Q09FC8 603 aa3.83□□□□□ -1.8
SNHG1-222ENST00000545308 TEFQ10587 303 aa3.83□□□□□ -1.8
SNHG1-222ENST00000545308 GTF2H2Q13888 395 aa3.83□□□□□ -1.8
SNHG1-222ENST00000545308 CALCRLQ16602 461 aa3.83□□□□□ -1.8
SNHG1-222ENST00000545308 PTGISQ16647 500 aa3.83□□□□□ -1.8
SNHG1-222ENST00000545308 AARDQ4LEZ3 155 aa3.83□□□□□ -1.8
SNHG1-222ENST00000545308 PHLDA2Q53GA4 152 aa3.83□□□□□ -1.8
SNHG1-222ENST00000545308 ZNF789Q5FWF6 425 aa3.83□□□□□ -1.8
SNHG1-222ENST00000545308 NDUFAF5Q5TEU4 345 aa3.83□□□□□ -1.8
SNHG1-222ENST00000545308 OR7E24Q6IFN5 339 aa3.83□□□□□ -1.8
SNHG1-222ENST00000545308 TRNP1Q6NT89 227 aa3.83□□□□□ -1.8
SNHG1-222ENST00000545308 GTF2H2CQ6P1K8 395 aa3.83□□□□□ -1.8
SNHG1-222ENST00000545308 FAM122CQ6P4D5 195 aa3.83□□□□□ -1.8
SNHG1-222ENST00000545308 PRSS55Q6UWB4 352 aaPredicted RBP3.83□□□□□ -1.8
SNHG1-222ENST00000545308 BTNL8Q6UX41 500 aa3.83□□□□□ -1.8
SNHG1-222ENST00000545308 RABEPKQ7Z6M1 372 aa3.83□□□□□ -1.8
SNHG1-222ENST00000545308 CCDC83Q8IWF9 413 aa3.83□□□□□ -1.8
SNHG1-222ENST00000545308 CFAP206Q8IYR0 622 aa3.83□□□□□ -1.8
SNHG1-222ENST00000545308 CLEC18CQ8NCF0 446 aa3.83□□□□□ -1.8
SNHG1-222ENST00000545308 NPEPL1Q8NDH3 523 aa3.83□□□□□ -1.8
SNHG1-222ENST00000545308 LPCAT1Q8NF37 534 aa3.83□□□□□ -1.8
SNHG1-222ENST00000545308 SPATA3Q8NHX4 192 aa3.83□□□□□ -1.8
SNHG1-222ENST00000545308 PROX1Q92786 737 aa3.83□□□□□ -1.8
SNHG1-222ENST00000545308 KLHL5Q96PQ7 755 aa3.83□□□□□ -1.8
SNHG1-222ENST00000545308 OR1F2PQ96R84 312 aa3.83□□□□□ -1.8
SNHG1-222ENST00000545308 PKP4Q99569 1192 aa3.83□□□□□ -1.8
SNHG1-222ENST00000545308 OSBPL8Q9BZF1 889 aa3.83□□□□□ -1.8
SNHG1-222ENST00000545308 TRIM7Q9C029 511 aa3.83□□□□□ -1.8
SNHG1-222ENST00000545308 LSG1Q9H089 658 aaKnown RBP3.83□□□□□ -1.8
SNHG1-222ENST00000545308 TRPC7Q9HCX4 862 aa3.83□□□□□ -1.8
SNHG1-222ENST00000545308 RAB9BQ9NP90 201 aa3.83□□□□□ -1.8
SNHG1-222ENST00000545308 PNPLA3Q9NST1 481 aa3.83□□□□□ -1.8
SNHG1-222ENST00000545308 OCIAD1Q9NX40 245 aa3.83□□□□□ -1.8
SNHG1-222ENST00000545308 SLCO1C1Q9NYB5 712 aa3.83□□□□□ -1.8
SNHG1-222ENST00000545308 FETUBQ9UGM5 382 aa3.83□□□□□ -1.8
SNHG1-222ENST00000545308 STX8Q9UNK0 236 aa3.83□□□□□ -1.8
SNHG1-222ENST00000545308 WDR83OSQ9Y284 106 aa3.83□□□□□ -1.8
SNHG1-222ENST00000545308 TMED3Q9Y3Q3 217 aa3.83□□□□□ -1.8
SNHG1-222ENST00000545308 HBS1LQ9Y450 684 aaKnown RBP3.83□□□□□ -1.8
SNHG1-222ENST00000545308 LRP12Q9Y561 859 aa3.83□□□□□ -1.8
SNHG1-222ENST00000545308 TONSLQ96HA7 1378 aa3.83□□□□□ -1.8
SNHG1-222ENST00000545308 TOGARAM1Q9Y4F4 1720 aa3.83□□□□□ -1.8
SNHG1-222ENST00000545308 ROCK2O75116 1388 aaKnown RBP3.82□□□□□ -1.8
SNHG1-222ENST00000545308 FLT4P35916 1363 aa3.82□□□□□ -1.8
SNHG1-222ENST00000545308 A0A0G2JNG1 304 aa3.82□□□□□ -1.8
SNHG1-222ENST00000545308 MED19A0JLT2 244 aaPredicted RBP3.82□□□□□ -1.8
SNHG1-222ENST00000545308 C5orf51A6NDU8 294 aa3.82□□□□□ -1.8
SNHG1-222ENST00000545308 MYMKA6NI61 221 aa3.82□□□□□ -1.8
SNHG1-222ENST00000545308 C15orf62A8K5M9 175 aa3.82□□□□□ -1.8
SNHG1-222ENST00000545308 PRR32B1ATL7 298 aa3.82□□□□□ -1.8
SNHG1-222ENST00000545308 FLRT2O43155 660 aa3.82□□□□□ -1.8
SNHG1-222ENST00000545308 BCAS2O75934 225 aaPredicted RBP3.82□□□□□ -1.8
SNHG1-222ENST00000545308 PMS2P2O95744 297 aa3.82□□□□□ -1.8
SNHG1-222ENST00000545308 TFAP2AP05549 437 aa3.82□□□□□ -1.8
SNHG1-222ENST00000545308 H1F0P07305 194 aaKnown RBP3.82□□□□□ -1.8
SNHG1-222ENST00000545308 CKMT2P17540 419 aa3.82□□□□□ -1.8
SNHG1-222ENST00000545308 JAK1P23458 1154 aa3.82□□□□□ -1.8
SNHG1-222ENST00000545308 CCKARP32238 428 aa3.82□□□□□ -1.8
SNHG1-222ENST00000545308 CTNNB1P35222 781 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms