RNA–Protein interactions for RNA: ENST00000545170.5

ATXN3-216, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 6,950 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-216ENST00000545170 ST3GAL4Q11206 333 aa8.4□□□□□ -1.06
ATXN3-216ENST00000545170 SNTB2Q13425 540 aaKnown RBP8.4□□□□□ -1.06
ATXN3-216ENST00000545170 CTXN3Q4LDR2 81 aa8.4□□□□□ -1.06
ATXN3-216ENST00000545170 C6orf141Q5SZD1 244 aa8.4□□□□□ -1.06
ATXN3-216ENST00000545170 ATG9BQ674R7 924 aa8.4□□□□□ -1.06
ATXN3-216ENST00000545170 RETSATQ6NUM9 610 aa8.4□□□□□ -1.06
ATXN3-216ENST00000545170 DNAJB3Q8WWF6 145 aa8.4□□□□□ -1.06
ATXN3-216ENST00000545170 HAS2Q92819 552 aa8.4□□□□□ -1.06
ATXN3-216ENST00000545170 ZNF395Q9H8N7 513 aaPredicted RBP8.4□□□□□ -1.06
ATXN3-216ENST00000545170 ZBTB20Q9HC78 741 aaPredicted RBP8.4□□□□□ -1.06
ATXN3-216ENST00000545170 RANGRFQ9HD47 186 aaPredicted RBP8.4□□□□□ -1.06
ATXN3-216ENST00000545170 TXNL4BQ9NX01 149 aaKnown RBP8.4□□□□□ -1.06
ATXN3-216ENST00000545170 CD8B2A6NJW9 211 aa8.4□□□□□ -1.06
ATXN3-216ENST00000545170 CD8BP10966 210 aa8.4□□□□□ -1.06
ATXN3-216ENST00000545170 CTPS1P17812 591 aa8.4□□□□□ -1.06
ATXN3-216ENST00000545170 LPOP22079 712 aaPredicted RBP8.4□□□□□ -1.06
ATXN3-216ENST00000545170 IGFALSP35858 605 aa8.4□□□□□ -1.06
ATXN3-216ENST00000545170 CXCR3P49682 368 aa8.4□□□□□ -1.06
ATXN3-216ENST00000545170 GABARAPL2P60520 117 aa8.4□□□□□ -1.06
ATXN3-216ENST00000545170 ZNF155Q12901 538 aaPredicted RBP8.4□□□□□ -1.06
ATXN3-216ENST00000545170 ADGRG6Q86SQ4 1221 aa8.4□□□□□ -1.06
ATXN3-216ENST00000545170 OR2AP1Q8NGE2 309 aa8.4□□□□□ -1.06
ATXN3-216ENST00000545170 ZNF419Q96HQ0 510 aaPredicted RBP8.4□□□□□ -1.06
ATXN3-216ENST00000545170 ATG5Q9H1Y0 275 aa8.4□□□□□ -1.06
ATXN3-216ENST00000545170 SDHAF2Q9NX18 166 aa8.4□□□□□ -1.06
ATXN3-216ENST00000545170 ATP10AO60312 1499 aa8.4□□□□□ -1.06
ATXN3-216ENST00000545170 MEIOCA2RUB1 952 aa8.4□□□□□ -1.06
ATXN3-216ENST00000545170 URADA6NGE7 173 aa8.4□□□□□ -1.06
ATXN3-216ENST00000545170 A6NL46 340 aa8.4□□□□□ -1.06
ATXN3-216ENST00000545170 LYRM1O43325 122 aa8.4□□□□□ -1.06
ATXN3-216ENST00000545170 SC5DO75845 299 aa8.4□□□□□ -1.06
ATXN3-216ENST00000545170 UCHL1P09936 223 aa8.4□□□□□ -1.06
ATXN3-216ENST00000545170 CASP3P42574 277 aa8.4□□□□□ -1.06
ATXN3-216ENST00000545170 GSK3BP49841 420 aa8.4□□□□□ -1.06
ATXN3-216ENST00000545170 GRIK4Q16099 956 aa8.4□□□□□ -1.06
ATXN3-216ENST00000545170 LDB1Q86U70 411 aaPredicted RBP8.4□□□□□ -1.06
ATXN3-216ENST00000545170 OR2AJ1Q8NGZ0 328 aa8.4□□□□□ -1.06
ATXN3-216ENST00000545170 DNAJB8Q8NHS0 232 aa8.4□□□□□ -1.06
ATXN3-216ENST00000545170 RELTQ969Z4 430 aa8.4□□□□□ -1.06
ATXN3-216ENST00000545170 ZBED3Q96IU2 234 aaPredicted RBP8.4□□□□□ -1.06
ATXN3-216ENST00000545170 C12orf57Q99622 126 aa8.4□□□□□ -1.06
ATXN3-216ENST00000545170 C2orf49Q9BVC5 232 aaPredicted RBP8.4□□□□□ -1.06
ATXN3-216ENST00000545170 FBXO44Q9H4M3 255 aa8.4□□□□□ -1.06
ATXN3-216ENST00000545170 KCNJ16Q9NPI9 418 aa8.4□□□□□ -1.06
ATXN3-216ENST00000545170 COPS3Q9UNS2 423 aa8.4□□□□□ -1.06
ATXN3-216ENST00000545170 ASTN1O14525 1302 aa8.4□□□□□ -1.06
ATXN3-216ENST00000545170 FMO6PO60774 539 aa8.4□□□□□ -1.06
ATXN3-216ENST00000545170 CAPN15O75808 1086 aa8.4□□□□□ -1.06
ATXN3-216ENST00000545170 CYB5AP00167 134 aa8.4□□□□□ -1.06
ATXN3-216ENST00000545170 FOXM1Q08050 763 aa8.4□□□□□ -1.06
ATXN3-216ENST00000545170 SGCGQ13326 291 aa8.4□□□□□ -1.06
ATXN3-216ENST00000545170 ATP6AP1Q15904 470 aa8.4□□□□□ -1.06
ATXN3-216ENST00000545170 EPGNQ6UW88 154 aa8.4□□□□□ -1.06
ATXN3-216ENST00000545170 UGT2A3Q6UWM9 527 aa8.4□□□□□ -1.06
ATXN3-216ENST00000545170 ZNF572Q7Z3I7 529 aaPredicted RBP8.4□□□□□ -1.06
ATXN3-216ENST00000545170 RAVER1Q8IY67 606 aaKnown RBP8.4□□□□□ -1.06
ATXN3-216ENST00000545170 BRSK1Q8TDC3 778 aa8.4□□□□□ -1.06
ATXN3-216ENST00000545170 GEMIN6Q8WXD5 167 aaKnown RBP8.4□□□□□ -1.06
ATXN3-216ENST00000545170 TAAR8Q969N4 342 aa8.4□□□□□ -1.06
ATXN3-216ENST00000545170 SEMA3CQ99985 751 aa8.4□□□□□ -1.06
ATXN3-216ENST00000545170 TCEAL2Q9H3H9 227 aaPredicted RBP8.4□□□□□ -1.06
ATXN3-216ENST00000545170 IFT22Q9H7X7 185 aa8.4□□□□□ -1.06
ATXN3-216ENST00000545170 SALL4Q9UJQ4 1053 aa8.4□□□□□ -1.06
ATXN3-216ENST00000545170 CNTN6Q9UQ52 1028 aa8.4□□□□□ -1.06
ATXN3-216ENST00000545170 TRAV20A0A0B4J274 112 aa8.4□□□□□ -1.07
ATXN3-216ENST00000545170 ZNF670-ZNF695F2Z2N8 137 aa8.4□□□□□ -1.07
ATXN3-216ENST00000545170 CKMP06732 381 aa8.4□□□□□ -1.07
ATXN3-216ENST00000545170 GNB3P16520 340 aa8.4□□□□□ -1.07
ATXN3-216ENST00000545170 AKR1C4P17516 323 aa8.4□□□□□ -1.07
ATXN3-216ENST00000545170 CTHP32929 405 aa8.4□□□□□ -1.07
ATXN3-216ENST00000545170 SSR2P43308 183 aa8.4□□□□□ -1.07
ATXN3-216ENST00000545170 ZNF33BQ06732 778 aa8.4□□□□□ -1.07
ATXN3-216ENST00000545170 CDNFQ49AH0 187 aa8.4□□□□□ -1.07
ATXN3-216ENST00000545170 ZDHHC24Q6UX98 284 aa8.4□□□□□ -1.07
ATXN3-216ENST00000545170 LRRC55Q6ZSA7 311 aa8.4□□□□□ -1.07
ATXN3-216ENST00000545170 ZNF584Q8IVC4 421 aa8.4□□□□□ -1.07
ATXN3-216ENST00000545170 RBFAQ8N0V3 343 aa8.4□□□□□ -1.07
ATXN3-216ENST00000545170 GLB1L3Q8NCI6 653 aaPredicted RBP8.4□□□□□ -1.07
ATXN3-216ENST00000545170 ZMIZ2Q8NF64 920 aa8.4□□□□□ -1.07
ATXN3-216ENST00000545170 PROKR2Q8NFJ6 384 aa8.4□□□□□ -1.07
ATXN3-216ENST00000545170 SH3YL1Q96HL8 342 aaPredicted RBP8.4□□□□□ -1.07
ATXN3-216ENST00000545170 ULBP1Q9BZM6 244 aa8.4□□□□□ -1.07
ATXN3-216ENST00000545170 OR51I1Q9H343 314 aa8.4□□□□□ -1.07
ATXN3-216ENST00000545170 AKTIPQ9H8T0 292 aa8.4□□□□□ -1.07
ATXN3-216ENST00000545170 SIAEQ9HAT2 523 aa8.4□□□□□ -1.07
ATXN3-216ENST00000545170 FLRT1Q9NZU1 646 aa8.4□□□□□ -1.07
ATXN3-216ENST00000545170 RPP40O75818 363 aaKnown RBP8.4□□□□□ -1.07
ATXN3-216ENST00000545170 ENGP17813 658 aa8.4□□□□□ -1.07
ATXN3-216ENST00000545170 PKLRP30613 574 aa8.4□□□□□ -1.07
ATXN3-216ENST00000545170 HERV-K104P61576 105 aa8.4□□□□□ -1.07
ATXN3-216ENST00000545170 POLR2LP62875 67 aaKnown RBP8.4□□□□□ -1.07
ATXN3-216ENST00000545170 PRR5P85299 388 aa8.4□□□□□ -1.07
ATXN3-216ENST00000545170 HTD2P86397 168 aa8.4□□□□□ -1.07
ATXN3-216ENST00000545170 ESCO2Q56NI9 601 aa8.4□□□□□ -1.07
ATXN3-216ENST00000545170 GDPD1Q8N9F7 314 aa8.4□□□□□ -1.07
ATXN3-216ENST00000545170 ZUFSPQ96AP4 578 aa8.4□□□□□ -1.07
ATXN3-216ENST00000545170 LENG9Q96B70 501 aa8.4□□□□□ -1.07
ATXN3-216ENST00000545170 MYNNQ9NPC7 610 aa8.4□□□□□ -1.07
ATXN3-216ENST00000545170 XPNPEP1Q9NQW7 623 aa8.4□□□□□ -1.07
ATXN3-216ENST00000545170 OSER1Q9NX31 292 aa8.4□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms