RNA–Protein interactions for RNA: ENST00000544967.5

USP28-213, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 1 (best) BASIC

Gene USP28, Length 3,498 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-213ENST00000544967 SCELO95171 688 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 WISP3O95389 354 aaPredicted RBP5.11□□□□□ -1.59
USP28-213ENST00000544967 HAPLN1P10915 354 aaPredicted RBP5.11□□□□□ -1.59
USP28-213ENST00000544967 CKMT1AP12532 417 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 IL7RP16871 459 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 DDX5P17844 614 aaKnown RBP5.11□□□□□ -1.59
USP28-213ENST00000544967 LBPP18428 481 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 HTR7P34969 479 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 SERPINH1P50454 418 aaKnown RBP5.11□□□□□ -1.59
USP28-213ENST00000544967 ATXN3P54252 364 aaPredicted RBP5.11□□□□□ -1.59
USP28-213ENST00000544967 VBP1P61758 197 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 KCNAB2Q13303 367 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 NFE2L1Q14494 772 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 TAB1Q15750 504 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 MAPK11Q15759 364 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 SMAD2Q15796 467 aaKnown RBP5.11□□□□□ -1.59
USP28-213ENST00000544967 UGT3A2Q3SY77 523 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 SEZ6Q53EL9 994 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 KRBOX4Q5JUW0 171 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 COLEC12Q5KU26 742 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 TMEM236Q5W0B7 351 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 KANK2Q63ZY3 851 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 RAB12Q6IQ22 244 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 RNF165Q6ZSG1 346 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 CHST15Q7LFX5 561 aaPredicted RBP5.11□□□□□ -1.59
USP28-213ENST00000544967 BHLHA9Q7RTU4 235 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 GPR149Q86SP6 731 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 CDH24Q86UP0 819 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 PIGZQ86VD9 579 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 HID1Q8IV36 788 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 CEP97Q8IW35 865 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 CADM2Q8N3J6 435 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 CHFRQ96EP1 664 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 TMEM169Q96HH4 297 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 GPR137Q96N19 417 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 FCRL3Q96P31 734 aaPredicted RBP5.11□□□□□ -1.59
USP28-213ENST00000544967 TCF25Q9BQ70 676 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 SLC30A2Q9BRI3 323 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 SNRNP25Q9BV90 132 aaKnown RBP5.11□□□□□ -1.59
USP28-213ENST00000544967 IFT22Q9H7X7 185 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 CRTAC1Q9NQ79 661 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 GKN1Q9NS71 199 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 FAM49BQ9NUQ9 324 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 POLR3BQ9NW08 1133 aaPredicted RBP5.11□□□□□ -1.59
USP28-213ENST00000544967 MOSPD1Q9UJG1 213 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 RUVBL2Q9Y230 463 aaKnown RBP5.11□□□□□ -1.59
USP28-213ENST00000544967 ASB4Q9Y574 426 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 CASTOR2A6NHX0 329 aa5.1□□□□□ -1.59
USP28-213ENST00000544967 TOR1AO14656 332 aa5.1□□□□□ -1.59
USP28-213ENST00000544967 SLC30A4O14863 429 aa5.1□□□□□ -1.59
USP28-213ENST00000544967 BCKDKO14874 412 aa5.1□□□□□ -1.59
USP28-213ENST00000544967 DSCR3O14972 297 aa5.1□□□□□ -1.59
USP28-213ENST00000544967 TGM6O95932 706 aa5.1□□□□□ -1.59
USP28-213ENST00000544967 LGI1O95970 557 aa5.1□□□□□ -1.59
USP28-213ENST00000544967 URODP06132 367 aa5.1□□□□□ -1.59
USP28-213ENST00000544967 S100A6P06703 90 aa5.1□□□□□ -1.59
USP28-213ENST00000544967 ADH1AP07327 375 aa5.1□□□□□ -1.59
USP28-213ENST00000544967 HMBSP08397 361 aa5.1□□□□□ -1.59
USP28-213ENST00000544967 ERVK-10P10266 1014 aa5.1□□□□□ -1.59
USP28-213ENST00000544967 CYP2A6P11509 494 aaPredicted RBP5.1□□□□□ -1.59
USP28-213ENST00000544967 CD36P16671 472 aa5.1□□□□□ -1.59
USP28-213ENST00000544967 ARL1P40616 181 aaPredicted RBP5.1□□□□□ -1.59
USP28-213ENST00000544967 MAGEA2P43356 314 aa5.1□□□□□ -1.59
USP28-213ENST00000544967 NCS1P62166 190 aa5.1□□□□□ -1.59
USP28-213ENST00000544967 ELP6Q0PNE2 266 aa5.1□□□□□ -1.59
USP28-213ENST00000544967 PCSK7Q16549 785 aa5.1□□□□□ -1.59
USP28-213ENST00000544967 MEP1AQ16819 746 aa5.1□□□□□ -1.59
USP28-213ENST00000544967 FAM83EQ2M2I3 478 aa5.1□□□□□ -1.59
USP28-213ENST00000544967 HSD17B12Q53GQ0 312 aa5.1□□□□□ -1.59
USP28-213ENST00000544967 KRTCAP3Q53RY4 240 aa5.1□□□□□ -1.59
USP28-213ENST00000544967 CLLU1Q5K131 121 aa5.1□□□□□ -1.59
USP28-213ENST00000544967 NCBP2-AS2Q69YL0 99 aa5.1□□□□□ -1.59
USP28-213ENST00000544967 CASC4Q6P4E1 433 aa5.1□□□□□ -1.59
USP28-213ENST00000544967 DPY19L3Q6ZPD9 716 aa5.1□□□□□ -1.59
USP28-213ENST00000544967 GPR155Q7Z3F1 870 aa5.1□□□□□ -1.59
USP28-213ENST00000544967 DEFB123Q8N688 67 aa5.1□□□□□ -1.59
USP28-213ENST00000544967 GDPD1Q8N9F7 314 aa5.1□□□□□ -1.59
USP28-213ENST00000544967 ADAM32Q8TC27 787 aa5.1□□□□□ -1.59
USP28-213ENST00000544967 RXFP2Q8WXD0 754 aa5.1□□□□□ -1.59
USP28-213ENST00000544967 SNAPC3Q92966 411 aa5.1□□□□□ -1.59
USP28-213ENST00000544967 COL26A1Q96A83 441 aa5.1□□□□□ -1.59
USP28-213ENST00000544967 ZNF669Q96BR6 464 aaPredicted RBP5.1□□□□□ -1.59
USP28-213ENST00000544967 GSTO2Q9H4Y5 243 aa5.1□□□□□ -1.59
USP28-213ENST00000544967 POPDC3Q9HBV1 291 aa5.1□□□□□ -1.59
USP28-213ENST00000544967 MALT1Q9UDY8 824 aa5.1□□□□□ -1.59
USP28-213ENST00000544967 ATP6V1HQ9UI12 483 aa5.1□□□□□ -1.59
USP28-213ENST00000544967 CYTH4Q9UIA0 394 aa5.1□□□□□ -1.59
USP28-213ENST00000544967 MAGED2Q9UNF1 606 aaPredicted RBP5.1□□□□□ -1.59
USP28-213ENST00000544967 TICRRQ7Z2Z1 1910 aa5.1□□□□□ -1.59
USP28-213ENST00000544967 LAMA3Q16787 3333 aa5.1□□□□□ -1.59
USP28-213ENST00000544967 FAM234BA2RU67 622 aa5.1□□□□□ -1.59
USP28-213ENST00000544967 MTMR11A4FU01 709 aa5.1□□□□□ -1.59
USP28-213ENST00000544967 KRT87PA6NCN2 255 aa5.1□□□□□ -1.59
USP28-213ENST00000544967 EFCAB10A6NFE3 127 aa5.1□□□□□ -1.59
USP28-213ENST00000544967 PRMT5O14744 637 aaPredicted RBP5.1□□□□□ -1.59
USP28-213ENST00000544967 B4GAT1O43505 415 aa5.1□□□□□ -1.59
USP28-213ENST00000544967 TGM5O43548 720 aa5.1□□□□□ -1.59
USP28-213ENST00000544967 AIREO43918 545 aa5.1□□□□□ -1.59
USP28-213ENST00000544967 ACSL4O60488 711 aa5.1□□□□□ -1.59
USP28-213ENST00000544967 MOSPD3O75425 235 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms