RNA–Protein interactions for RNA: ENST00000544964.6

ACTN1-206, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 891 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-206ENST00000544964 HIST1H2ADP20671 130 aa11.96□□□□□ -0.49
ACTN1-206ENST00000544964 PRDX3P30048 256 aaKnown RBP11.96□□□□□ -0.49
ACTN1-206ENST00000544964 SHMT2P34897 504 aa11.96□□□□□ -0.49
ACTN1-206ENST00000544964 KCNC1P48547 511 aa11.96□□□□□ -0.49
ACTN1-206ENST00000544964 RAB28P51157 221 aa11.96□□□□□ -0.49
ACTN1-206ENST00000544964 ITGA1P56199 1179 aa11.96□□□□□ -0.49
ACTN1-206ENST00000544964 PRKAA1Q13131 559 aa11.96□□□□□ -0.49
ACTN1-206ENST00000544964 FASTKQ14296 549 aaKnown RBP11.96□□□□□ -0.49
ACTN1-206ENST00000544964 FAM83EQ2M2I3 478 aa11.96□□□□□ -0.49
ACTN1-206ENST00000544964 PTCHD3Q3KNS1 767 aa11.96□□□□□ -0.49
ACTN1-206ENST00000544964 TMTC4Q5T4D3 741 aa11.96□□□□□ -0.49
ACTN1-206ENST00000544964 ZNF385CQ66K41 422 aaPredicted RBP11.96□□□□□ -0.49
ACTN1-206ENST00000544964 FRA10AC1Q70Z53 315 aa11.96□□□□□ -0.49
ACTN1-206ENST00000544964 CCDC91Q7Z6B0 441 aa11.96□□□□□ -0.49
ACTN1-206ENST00000544964 ADAMTSL2Q86TH1 951 aa11.96□□□□□ -0.49
ACTN1-206ENST00000544964 ISCA2Q86U28 154 aa11.96□□□□□ -0.49
ACTN1-206ENST00000544964 ATCAYQ86WG3 371 aa11.96□□□□□ -0.49
ACTN1-206ENST00000544964 SYTL1Q8IYJ3 562 aa11.96□□□□□ -0.49
ACTN1-206ENST00000544964 ADGRF3Q8IZF5 1079 aa11.96□□□□□ -0.49
ACTN1-206ENST00000544964 C4orf33Q8N1A6 199 aa11.96□□□□□ -0.49
ACTN1-206ENST00000544964 PPFIBP2Q8ND30 876 aa11.96□□□□□ -0.49
ACTN1-206ENST00000544964 ANKRD7Q92527 254 aa11.96□□□□□ -0.49
ACTN1-206ENST00000544964 KIAA1191Q96A73 305 aa11.96□□□□□ -0.49
ACTN1-206ENST00000544964 CABS1Q96KC9 395 aa11.96□□□□□ -0.49
ACTN1-206ENST00000544964 SCYL1Q96KG9 808 aa11.96□□□□□ -0.49
ACTN1-206ENST00000544964 HIST1H2AHQ96KK5 128 aa11.96□□□□□ -0.49
ACTN1-206ENST00000544964 GPR78Q96P69 363 aa11.96□□□□□ -0.49
ACTN1-206ENST00000544964 TRAPPC9Q96Q05 1148 aa11.96□□□□□ -0.49
ACTN1-206ENST00000544964 HIST1H2AJQ99878 128 aa11.96□□□□□ -0.49
ACTN1-206ENST00000544964 H2AFJQ9BTM1 129 aa11.96□□□□□ -0.49
ACTN1-206ENST00000544964 NLNQ9BYT8 704 aa11.96□□□□□ -0.49
ACTN1-206ENST00000544964 TRIM54Q9BYV2 358 aa11.96□□□□□ -0.49
ACTN1-206ENST00000544964 KLHL25Q9H0H3 589 aa11.96□□□□□ -0.49
ACTN1-206ENST00000544964 FANCEQ9HB96 536 aa11.96□□□□□ -0.49
ACTN1-206ENST00000544964 ACSS2Q9NR19 701 aa11.96□□□□□ -0.49
ACTN1-206ENST00000544964 ARL15Q9NXU5 204 aa11.96□□□□□ -0.49
ACTN1-206ENST00000544964 SPHK1Q9NYA1 384 aa11.96□□□□□ -0.49
ACTN1-206ENST00000544964 TCFL5Q9UL49 500 aa11.96□□□□□ -0.49
ACTN1-206ENST00000544964 SNX7Q9UNH6 387 aa11.96□□□□□ -0.49
ACTN1-206ENST00000544964 NOVA2Q9UNW9 492 aaKnown RBP11.96□□□□□ -0.49
ACTN1-206ENST00000544964 OARD1Q9Y530 152 aa11.96□□□□□ -0.49
ACTN1-206ENST00000544964 BLACEA4D250 179 aa11.95□□□□□ -0.5
ACTN1-206ENST00000544964 PABPN1LA6NDY0 278 aaKnown RBP11.95□□□□□ -0.5
ACTN1-206ENST00000544964 NCF1BA6NI72 391 aaPredicted RBP11.95□□□□□ -0.5
ACTN1-206ENST00000544964 NCF1CA8MVU1 366 aaPredicted RBP11.95□□□□□ -0.5
ACTN1-206ENST00000544964 RGS16O15492 202 aaPredicted RBP11.95□□□□□ -0.5
ACTN1-206ENST00000544964 SLC16A8O95907 504 aa11.95□□□□□ -0.5
ACTN1-206ENST00000544964 CHRM5P08912 532 aaPredicted RBP11.95□□□□□ -0.5
ACTN1-206ENST00000544964 ENO2P09104 434 aaPredicted RBP11.95□□□□□ -0.5
ACTN1-206ENST00000544964 COL6A2P12110 1019 aa11.95□□□□□ -0.5
ACTN1-206ENST00000544964 NCF1P14598 390 aaPredicted RBP11.95□□□□□ -0.5
ACTN1-206ENST00000544964 GNLYP22749 145 aa11.95□□□□□ -0.5
ACTN1-206ENST00000544964 PEBP1P30086 187 aaKnown RBP11.95□□□□□ -0.5
ACTN1-206ENST00000544964 CCL11P51671 97 aa11.95□□□□□ -0.5
ACTN1-206ENST00000544964 PNLIPRP1P54315 467 aa11.95□□□□□ -0.5
ACTN1-206ENST00000544964 TSTA3Q13630 321 aaPredicted RBP11.95□□□□□ -0.5
ACTN1-206ENST00000544964 ACAP2Q15057 778 aa11.95□□□□□ -0.5
ACTN1-206ENST00000544964 NCF4Q15080 339 aa11.95□□□□□ -0.5
ACTN1-206ENST00000544964 PRR30Q53SZ7 412 aaPredicted RBP11.95□□□□□ -0.5
ACTN1-206ENST00000544964 KLC3Q6P597 504 aa11.95□□□□□ -0.5
ACTN1-206ENST00000544964 SUSD1Q6UWL2 747 aa11.95□□□□□ -0.5
ACTN1-206ENST00000544964 CDHR3Q6ZTQ4 885 aa11.95□□□□□ -0.5
ACTN1-206ENST00000544964 SH2D5Q6ZV89 423 aa11.95□□□□□ -0.5
ACTN1-206ENST00000544964 TRABD2AQ86V40 505 aa11.95□□□□□ -0.5
ACTN1-206ENST00000544964 GPSM1Q86YR5 675 aa11.95□□□□□ -0.5
ACTN1-206ENST00000544964 RAB42Q8N4Z0 105 aa11.95□□□□□ -0.5
ACTN1-206ENST00000544964 Q8NA96 180 aa11.95□□□□□ -0.5
ACTN1-206ENST00000544964 LINC01555Q8NAE3 123 aa11.95□□□□□ -0.5
ACTN1-206ENST00000544964 GALNT11Q8NCW6 608 aa11.95□□□□□ -0.5
ACTN1-206ENST00000544964 OR2L8Q8NGY9 312 aa11.95□□□□□ -0.5
ACTN1-206ENST00000544964 FLVCR1-AS1Q8TAF5 88 aa11.95□□□□□ -0.5
ACTN1-206ENST00000544964 CPT1CQ8TCG5 803 aa11.95□□□□□ -0.5
ACTN1-206ENST00000544964 ACMSDQ8TDX5 336 aa11.95□□□□□ -0.5
ACTN1-206ENST00000544964 ZNF480Q8WV37 535 aa11.95□□□□□ -0.5
ACTN1-206ENST00000544964 CLIP3Q96DZ5 547 aa11.95□□□□□ -0.5
ACTN1-206ENST00000544964 CCDC138Q96M89 665 aa11.95□□□□□ -0.5
ACTN1-206ENST00000544964 TSNARE1Q96NA8 513 aa11.95□□□□□ -0.5
ACTN1-206ENST00000544964 EGFL8Q99944 293 aa11.95□□□□□ -0.5
ACTN1-206ENST00000544964 NUDT9Q9BW91 350 aa11.95□□□□□ -0.5
ACTN1-206ENST00000544964 RAB11FIP5Q9BXF6 653 aa11.95□□□□□ -0.5
ACTN1-206ENST00000544964 ATG10Q9H0Y0 220 aa11.95□□□□□ -0.5
ACTN1-206ENST00000544964 ACTR5Q9H9F9 607 aaPredicted RBP11.95□□□□□ -0.5
ACTN1-206ENST00000544964 ABCF3Q9NUQ8 709 aa11.95□□□□□ -0.5
ACTN1-206ENST00000544964 SPATA7Q9P0W8 599 aa11.95□□□□□ -0.5
ACTN1-206ENST00000544964 STOX2Q9P2F5 926 aaPredicted RBP11.95□□□□□ -0.5
ACTN1-206ENST00000544964 RNF112Q9ULX5 631 aa11.95□□□□□ -0.5
ACTN1-206ENST00000544964 DOCK10Q96BY6 2186 aa11.95□□□□□ -0.5
ACTN1-206ENST00000544964 POLEQ07864 2286 aa11.94□□□□□ -0.5
ACTN1-206ENST00000544964 TTLL8A6PVC2 850 aa11.94□□□□□ -0.5
ACTN1-206ENST00000544964 ISM1B1AKI9 464 aa11.94□□□□□ -0.5
ACTN1-206ENST00000544964 UBXN8O00124 270 aa11.94□□□□□ -0.5
ACTN1-206ENST00000544964 HCRTR1O43613 425 aa11.94□□□□□ -0.5
ACTN1-206ENST00000544964 KLK3P07288 261 aaPredicted RBP11.94□□□□□ -0.5
ACTN1-206ENST00000544964 RNF224P0DH78 156 aa11.94□□□□□ -0.5
ACTN1-206ENST00000544964 KRT4P19013 534 aa11.94□□□□□ -0.5
ACTN1-206ENST00000544964 IMPA1P29218 277 aa11.94□□□□□ -0.5
ACTN1-206ENST00000544964 GABRA4P48169 554 aa11.94□□□□□ -0.5
ACTN1-206ENST00000544964 TGFBIQ15582 683 aa11.94□□□□□ -0.5
ACTN1-206ENST00000544964 ZIC1Q15915 447 aa11.94□□□□□ -0.5
ACTN1-206ENST00000544964 CYP2A13Q16696 494 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms