RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 KEAP1Q14145 624 aa6.33□□□□□ -1.4
PTPRO-208ENST00000542557 NEDD8Q15843 81 aa6.33□□□□□ -1.4
PTPRO-208ENST00000542557 CTU2Q2VPK5 515 aaKnown RBP6.33□□□□□ -1.4
PTPRO-208ENST00000542557 ZNF658BQ4V348 819 aaPredicted RBP6.33□□□□□ -1.4
PTPRO-208ENST00000542557 BCL7AQ4VC05 210 aa6.33□□□□□ -1.4
PTPRO-208ENST00000542557 SPIN4Q56A73 249 aa6.33□□□□□ -1.4
PTPRO-208ENST00000542557 GTF2IRD2BQ6EKJ0 949 aa6.33□□□□□ -1.4
PTPRO-208ENST00000542557 OR2T5Q6IEZ7 315 aa6.33□□□□□ -1.4
PTPRO-208ENST00000542557 ERAP2Q6P179 960 aa6.33□□□□□ -1.4
PTPRO-208ENST00000542557 TMEM26Q6ZUK4 368 aa6.33□□□□□ -1.4
PTPRO-208ENST00000542557 CBLL1Q75N03 491 aa6.33□□□□□ -1.4
PTPRO-208ENST00000542557 PIWIL3Q7Z3Z3 882 aaKnown RBP6.33□□□□□ -1.4
PTPRO-208ENST00000542557 RBM23Q86U06 439 aaKnown RBP6.33□□□□□ -1.4
PTPRO-208ENST00000542557 GTF2IRD2Q86UP8 949 aa6.33□□□□□ -1.4
PTPRO-208ENST00000542557 SPARTQ8N0X7 666 aa6.33□□□□□ -1.4
PTPRO-208ENST00000542557 KIAA1958Q8N8K9 716 aa6.33□□□□□ -1.4
PTPRO-208ENST00000542557 RASGEF1AQ8N9B8 481 aa6.33□□□□□ -1.4
PTPRO-208ENST00000542557 SETD9Q8NE22 299 aa6.33□□□□□ -1.4
PTPRO-208ENST00000542557 OR7A2PQ8NGA2 310 aa6.33□□□□□ -1.4
PTPRO-208ENST00000542557 OR2T29Q8NH02 315 aa6.33□□□□□ -1.4
PTPRO-208ENST00000542557 WFIKKN2Q8TEU8 576 aa6.33□□□□□ -1.4
PTPRO-208ENST00000542557 OR4K3Q96R72 315 aa6.33□□□□□ -1.4
PTPRO-208ENST00000542557 EBPLQ9BY08 206 aa6.33□□□□□ -1.4
PTPRO-208ENST00000542557 FANCEQ9HB96 536 aa6.33□□□□□ -1.4
PTPRO-208ENST00000542557 PLGRKTQ9HBL7 147 aa6.33□□□□□ -1.4
PTPRO-208ENST00000542557 SIRT5Q9NXA8 310 aa6.33□□□□□ -1.4
PTPRO-208ENST00000542557 PCDHB11Q9Y5F2 797 aa6.33□□□□□ -1.4
PTPRO-208ENST00000542557 KLHL33A6NCF5 533 aa6.32□□□□□ -1.4
PTPRO-208ENST00000542557 KRT87PA6NCN2 255 aa6.32□□□□□ -1.4
PTPRO-208ENST00000542557 TTC34A8MYJ7 566 aa6.32□□□□□ -1.4
PTPRO-208ENST00000542557 M0QX08 132 aa6.32□□□□□ -1.4
PTPRO-208ENST00000542557 SLC1A7O00341 560 aa6.32□□□□□ -1.4
PTPRO-208ENST00000542557 SLC9A3R1O14745 358 aaPredicted RBP6.32□□□□□ -1.4
PTPRO-208ENST00000542557 NPC1O15118 1278 aa6.32□□□□□ -1.4
PTPRO-208ENST00000542557 B4GAT1O43505 415 aa6.32□□□□□ -1.4
PTPRO-208ENST00000542557 ABCB1P08183 1280 aaPredicted RBP6.32□□□□□ -1.4
PTPRO-208ENST00000542557 SYN1P17600 705 aa6.32□□□□□ -1.4
PTPRO-208ENST00000542557 FPR1P21462 350 aa6.32□□□□□ -1.4
PTPRO-208ENST00000542557 IGFBP5P24593 272 aa6.32□□□□□ -1.4
PTPRO-208ENST00000542557 DNAJA1P31689 397 aaKnown RBP6.32□□□□□ -1.4
PTPRO-208ENST00000542557 KDELR2P33947 212 aa6.32□□□□□ -1.4
PTPRO-208ENST00000542557 HPCAL1P37235 193 aa6.32□□□□□ -1.4
PTPRO-208ENST00000542557 NAE1Q13564 534 aa6.32□□□□□ -1.4
PTPRO-208ENST00000542557 CCDC92Q53HC0 331 aaPredicted RBP6.32□□□□□ -1.4
PTPRO-208ENST00000542557 PRSS36Q5K4E3 855 aa6.32□□□□□ -1.4
PTPRO-208ENST00000542557 ANXA8L1Q5VT79 327 aa6.32□□□□□ -1.4
PTPRO-208ENST00000542557 LAIR2Q6ISS4 152 aa6.32□□□□□ -1.4
PTPRO-208ENST00000542557 ZCCHC8Q6NZY4 707 aaKnown RBP6.32□□□□□ -1.4
PTPRO-208ENST00000542557 GALNT18Q6P9A2 607 aa6.32□□□□□ -1.4
PTPRO-208ENST00000542557 LIPIQ6XZB0 460 aa6.32□□□□□ -1.4
PTPRO-208ENST00000542557 EIF3MQ7L2H7 374 aaKnown RBP6.32□□□□□ -1.4
PTPRO-208ENST00000542557 CHST15Q7LFX5 561 aaPredicted RBP6.32□□□□□ -1.4
PTPRO-208ENST00000542557 NLRP8Q86W28 1048 aa6.32□□□□□ -1.4
PTPRO-208ENST00000542557 PTOV1Q86YD1 416 aa6.32□□□□□ -1.4
PTPRO-208ENST00000542557 ANKRD13BQ86YJ7 626 aa6.32□□□□□ -1.4
PTPRO-208ENST00000542557 SYNPOQ8N3V7 929 aa6.32□□□□□ -1.4
PTPRO-208ENST00000542557 MRPL43Q8N983 215 aaKnown RBP6.32□□□□□ -1.4
PTPRO-208ENST00000542557 PIK3C3Q8NEB9 887 aa6.32□□□□□ -1.4
PTPRO-208ENST00000542557 REPS1Q96D71 796 aa6.32□□□□□ -1.4
PTPRO-208ENST00000542557 WDR34Q96EX3 536 aa6.32□□□□□ -1.4
PTPRO-208ENST00000542557 FOPNLQ96NB1 174 aa6.32□□□□□ -1.4
PTPRO-208ENST00000542557 DUSP26Q9BV47 211 aa6.32□□□□□ -1.4
PTPRO-208ENST00000542557 CHST8Q9H2A9 424 aa6.32□□□□□ -1.4
PTPRO-208ENST00000542557 ADNPQ9H2P0 1102 aa6.32□□□□□ -1.4
PTPRO-208ENST00000542557 TRIT1Q9H3H1 467 aaKnown RBP6.32□□□□□ -1.4
PTPRO-208ENST00000542557 GPN2Q9H9Y4 310 aaPredicted RBP6.32□□□□□ -1.4
PTPRO-208ENST00000542557 SGK2Q9HBY8 427 aa6.32□□□□□ -1.4
PTPRO-208ENST00000542557 VNN3Q9NY84 501 aa6.32□□□□□ -1.4
PTPRO-208ENST00000542557 PCDHGB1Q9Y5G3 927 aa6.32□□□□□ -1.4
PTPRO-208ENST00000542557 C1orf226A1L170 272 aa6.32□□□□□ -1.4
PTPRO-208ENST00000542557 TRIM43BA6NCK2 446 aa6.32□□□□□ -1.4
PTPRO-208ENST00000542557 HIDE1A8MVS5 230 aa6.32□□□□□ -1.4
PTPRO-208ENST00000542557 BCKDKO14874 412 aa6.32□□□□□ -1.4
PTPRO-208ENST00000542557 UGT2B11O75310 529 aa6.32□□□□□ -1.4
PTPRO-208ENST00000542557 SLC16A8O95907 504 aa6.32□□□□□ -1.4
PTPRO-208ENST00000542557 FABP3P05413 133 aa6.32□□□□□ -1.4
PTPRO-208ENST00000542557 HTR1AP08908 422 aa6.32□□□□□ -1.4
PTPRO-208ENST00000542557 HNRNPA1P09651 372 aaKnown RBP eCLIP6.32□□□□□ -1.4
PTPRO-208ENST00000542557 ELFN1P0C7U0 828 aa6.32□□□□□ -1.4
PTPRO-208ENST00000542557 ITIH1P19827 911 aa6.32□□□□□ -1.4
PTPRO-208ENST00000542557 CCNA2P20248 432 aa6.32□□□□□ -1.4
PTPRO-208ENST00000542557 BDKRB1P46663 353 aa6.32□□□□□ -1.4
PTPRO-208ENST00000542557 ARHGDIAP52565 204 aa6.32□□□□□ -1.4
PTPRO-208ENST00000542557 ITGA1P56199 1179 aa6.32□□□□□ -1.4
PTPRO-208ENST00000542557 ERVFC1P60507 584 aa6.32□□□□□ -1.4
PTPRO-208ENST00000542557 CXCR4P61073 352 aa6.32□□□□□ -1.4
PTPRO-208ENST00000542557 RAE1P78406 368 aaKnown RBP6.32□□□□□ -1.4
PTPRO-208ENST00000542557 TMEM115Q12893 351 aaPredicted RBP6.32□□□□□ -1.4
PTPRO-208ENST00000542557 NFATC3Q12968 1075 aa6.32□□□□□ -1.4
PTPRO-208ENST00000542557 MEP1AQ16819 746 aa6.32□□□□□ -1.4
PTPRO-208ENST00000542557 KDM4DQ6B0I6 523 aa6.32□□□□□ -1.4
PTPRO-208ENST00000542557 CAPN13Q6MZZ7 669 aaPredicted RBP6.32□□□□□ -1.4
PTPRO-208ENST00000542557 ZNF765Q7L2R6 523 aa6.32□□□□□ -1.4
PTPRO-208ENST00000542557 PARS2Q7L3T8 475 aaKnown RBP6.32□□□□□ -1.4
PTPRO-208ENST00000542557 RNF175Q8N4F7 328 aa6.32□□□□□ -1.4
PTPRO-208ENST00000542557 B4GALNT2Q8NHY0 566 aa6.32□□□□□ -1.4
PTPRO-208ENST00000542557 CYB5D2Q8WUJ1 264 aa6.32□□□□□ -1.4
PTPRO-208ENST00000542557 CHTF18Q8WVB6 975 aa6.32□□□□□ -1.4
PTPRO-208ENST00000542557 SNX19Q92543 992 aa6.32□□□□□ -1.4
PTPRO-208ENST00000542557 EZH1Q92800 747 aaPredicted RBP6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms