RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 PAQR7Q86WK9 346 aa18.16■□□□□ 0.5
TNFRSF1A-213ENST00000540022 TRAPPC9Q96Q05 1148 aa18.16■□□□□ 0.5
TNFRSF1A-213ENST00000540022 CDC6Q99741 560 aa18.16■□□□□ 0.5
TNFRSF1A-213ENST00000540022 PLCD4Q9BRC7 762 aa18.16■□□□□ 0.5
TNFRSF1A-213ENST00000540022 ZMYND15Q9H091 742 aa18.16■□□□□ 0.5
TNFRSF1A-213ENST00000540022 SEMA6CQ9H3T2 930 aa18.16■□□□□ 0.5
TNFRSF1A-213ENST00000540022 C1GALT1Q9NS00 363 aa18.16■□□□□ 0.5
TNFRSF1A-213ENST00000540022 ZNF490Q9ULM2 529 aaPredicted RBP18.16■□□□□ 0.5
TNFRSF1A-213ENST00000540022 SNX7Q9UNH6 387 aa18.16■□□□□ 0.5
TNFRSF1A-213ENST00000540022 WASF3Q9UPY6 502 aa18.16■□□□□ 0.5
TNFRSF1A-213ENST00000540022 KLK4Q9Y5K2 254 aa18.16■□□□□ 0.5
TNFRSF1A-213ENST00000540022 DNAJC15Q9Y5T4 150 aa18.16■□□□□ 0.5
TNFRSF1A-213ENST00000540022 MN1Q10571 1320 aaPredicted RBP18.16■□□□□ 0.5
TNFRSF1A-213ENST00000540022 PTPRBP23467 1997 aa18.16■□□□□ 0.5
TNFRSF1A-213ENST00000540022 FEZF1A0PJY2 475 aa18.15■□□□□ 0.5
TNFRSF1A-213ENST00000540022 OR2A25A4D2G3 310 aa18.15■□□□□ 0.5
TNFRSF1A-213ENST00000540022 CRCPO75575 148 aa18.15■□□□□ 0.5
TNFRSF1A-213ENST00000540022 CPNE6O95741 557 aa18.15■□□□□ 0.5
TNFRSF1A-213ENST00000540022 UROSP10746 265 aa18.15■□□□□ 0.5
TNFRSF1A-213ENST00000540022 HMOX2P30519 316 aa18.15■□□□□ 0.5
TNFRSF1A-213ENST00000540022 HTR6P50406 440 aa18.15■□□□□ 0.5
TNFRSF1A-213ENST00000540022 SIM1P81133 766 aaPredicted RBP18.15■□□□□ 0.5
TNFRSF1A-213ENST00000540022 REEP5Q00765 189 aa18.15■□□□□ 0.5
TNFRSF1A-213ENST00000540022 ZIC1Q15915 447 aa18.15■□□□□ 0.5
TNFRSF1A-213ENST00000540022 CGB2Q6NT52 195 aa18.15■□□□□ 0.5
TNFRSF1A-213ENST00000540022 TMEM71Q6P5X7 295 aa18.15■□□□□ 0.5
TNFRSF1A-213ENST00000540022 PLD3Q8IV08 490 aa18.15■□□□□ 0.5
TNFRSF1A-213ENST00000540022 ZUFSPQ96AP4 578 aa18.15■□□□□ 0.5
TNFRSF1A-213ENST00000540022 MAGEB10Q96LZ2 347 aaPredicted RBP18.15■□□□□ 0.5
TNFRSF1A-213ENST00000540022 CNTNAP3BQ96NU0 1288 aa18.15■□□□□ 0.5
TNFRSF1A-213ENST00000540022 CD180Q99467 661 aa18.15■□□□□ 0.5
TNFRSF1A-213ENST00000540022 AIF1LQ9BQI0 150 aa18.15■□□□□ 0.5
TNFRSF1A-213ENST00000540022 CNTNAP3Q9BZ76 1288 aa18.15■□□□□ 0.5
TNFRSF1A-213ENST00000540022 SLC29A3Q9BZD2 475 aa18.15■□□□□ 0.5
TNFRSF1A-213ENST00000540022 SYNDIG1Q9H7V2 258 aa18.15■□□□□ 0.5
TNFRSF1A-213ENST00000540022 ANGPTL2Q9UKU9 493 aa18.15■□□□□ 0.5
TNFRSF1A-213ENST00000540022 EPG5Q9HCE0 2579 aa18.15■□□□□ 0.5
TNFRSF1A-213ENST00000540022 GOLGA4Q13439 2230 aaKnown RBP18.15■□□□□ 0.5
TNFRSF1A-213ENST00000540022 WDFY3Q8IZQ1 3526 aa18.15■□□□□ 0.5
TNFRSF1A-213ENST00000540022 IGHV5-51A0A0C4DH38 117 aa18.14■□□□□ 0.49
TNFRSF1A-213ENST00000540022 TLCD2A6NGC4 264 aa18.14■□□□□ 0.49
TNFRSF1A-213ENST00000540022 SLC9B1P1A6NJY1 282 aa18.14■□□□□ 0.49
TNFRSF1A-213ENST00000540022 H0YIV9 168 aa18.14■□□□□ 0.49
TNFRSF1A-213ENST00000540022 NTN3O00634 580 aaPredicted RBP18.14■□□□□ 0.49
TNFRSF1A-213ENST00000540022 HAT1O14929 419 aa18.14■□□□□ 0.49
TNFRSF1A-213ENST00000540022 FOXC1Q12948 553 aa18.14■□□□□ 0.49
TNFRSF1A-213ENST00000540022 LAPTM5Q13571 262 aa18.14■□□□□ 0.49
TNFRSF1A-213ENST00000540022 CCDC157Q569K6 752 aa18.14■□□□□ 0.49
TNFRSF1A-213ENST00000540022 PAGE2BQ5JRK9 111 aa18.14■□□□□ 0.49
TNFRSF1A-213ENST00000540022 ADNP2Q6IQ32 1131 aa18.14■□□□□ 0.49
TNFRSF1A-213ENST00000540022 MED27Q6P2C8 311 aa18.14■□□□□ 0.49
TNFRSF1A-213ENST00000540022 ZNF574Q6ZN55 896 aaPredicted RBP18.14■□□□□ 0.49
TNFRSF1A-213ENST00000540022 SLCO6A1Q86UG4 719 aa18.14■□□□□ 0.49
TNFRSF1A-213ENST00000540022 ANKMY1Q9P2S6 941 aa18.14■□□□□ 0.49
TNFRSF1A-213ENST00000540022 AKAP13Q12802 2813 aa18.13■□□□□ 0.49
TNFRSF1A-213ENST00000540022 MANBAO00462 879 aa18.13■□□□□ 0.49
TNFRSF1A-213ENST00000540022 LCMT2O60294 686 aaKnown RBP18.13■□□□□ 0.49
TNFRSF1A-213ENST00000540022 JUNP05412 331 aaKnown RBP18.13■□□□□ 0.49
TNFRSF1A-213ENST00000540022 DRD4P21917 467 aa18.13■□□□□ 0.49
TNFRSF1A-213ENST00000540022 CXCR2P25025 360 aa18.13■□□□□ 0.49
TNFRSF1A-213ENST00000540022 HIST2H2ACQ16777 129 aaPredicted RBP18.13■□□□□ 0.49
TNFRSF1A-213ENST00000540022 SNAP47Q5SQN1 464 aa18.13■□□□□ 0.49
TNFRSF1A-213ENST00000540022 CACHD1Q5VU97 1274 aa18.13■□□□□ 0.49
TNFRSF1A-213ENST00000540022 HIST2H2AA3Q6FI13 130 aa18.13■□□□□ 0.49
TNFRSF1A-213ENST00000540022 TMIGD1Q6UXZ0 262 aa18.13■□□□□ 0.49
TNFRSF1A-213ENST00000540022 WDR75Q8IWA0 830 aaKnown RBP18.13■□□□□ 0.49
TNFRSF1A-213ENST00000540022 LAS2Q8IYD9 372 aa18.13■□□□□ 0.49
TNFRSF1A-213ENST00000540022 KRT78Q8N1N4 520 aa18.13■□□□□ 0.49
TNFRSF1A-213ENST00000540022 C19orf47Q8N9M1 422 aaKnown RBP18.13■□□□□ 0.49
TNFRSF1A-213ENST00000540022 ANKRD53Q8N9V6 530 aa18.13■□□□□ 0.49
TNFRSF1A-213ENST00000540022 OR7G3Q8NG95 312 aa18.13■□□□□ 0.49
TNFRSF1A-213ENST00000540022 WDR20Q8TBZ3 569 aa18.13■□□□□ 0.49
TNFRSF1A-213ENST00000540022 TWIST2Q8WVJ9 160 aa18.13■□□□□ 0.49
TNFRSF1A-213ENST00000540022 THOC1Q96FV9 657 aaKnown RBP18.13■□□□□ 0.49
TNFRSF1A-213ENST00000540022 TUBB1Q9H4B7 451 aa18.13■□□□□ 0.49
TNFRSF1A-213ENST00000540022 RABEP2Q9H5N1 569 aa18.13■□□□□ 0.49
TNFRSF1A-213ENST00000540022 SYNPO2LQ9H987 977 aa18.13■□□□□ 0.49
TNFRSF1A-213ENST00000540022 FARSBQ9NSD9 589 aaKnown RBP18.13■□□□□ 0.49
TNFRSF1A-213ENST00000540022 BTRCQ9Y297 605 aa18.13■□□□□ 0.49
TNFRSF1A-213ENST00000540022 PCDHGA11Q9Y5H2 935 aa18.13■□□□□ 0.49
TNFRSF1A-213ENST00000540022 PTGDR2Q9Y5Y4 395 aa18.13■□□□□ 0.49
TNFRSF1A-213ENST00000540022 KNTC1P50748 2209 aa18.13■□□□□ 0.49
TNFRSF1A-213ENST00000540022 TRBC2A0A5B9 178 aa18.13■□□□□ 0.49
TNFRSF1A-213ENST00000540022 ZNF195O14628 629 aa18.13■□□□□ 0.49
TNFRSF1A-213ENST00000540022 HGSO14964 777 aaPredicted RBP18.13■□□□□ 0.49
TNFRSF1A-213ENST00000540022 CTSVO60911 334 aa18.13■□□□□ 0.49
TNFRSF1A-213ENST00000540022 SKAP2O75563 359 aaPredicted RBP18.13■□□□□ 0.49
TNFRSF1A-213ENST00000540022 RASSF9O75901 435 aa18.13■□□□□ 0.49
TNFRSF1A-213ENST00000540022 TGDSO95455 350 aa18.13■□□□□ 0.49
TNFRSF1A-213ENST00000540022 KRT6AP02538 564 aa18.13■□□□□ 0.49
TNFRSF1A-213ENST00000540022 KRT6BP04259 564 aa18.13■□□□□ 0.49
TNFRSF1A-213ENST00000540022 KRT6CP48668 564 aa18.13■□□□□ 0.49
TNFRSF1A-213ENST00000540022 NEK2P51955 445 aa18.13■□□□□ 0.49
TNFRSF1A-213ENST00000540022 NAA25Q14CX7 972 aa18.13■□□□□ 0.49
TNFRSF1A-213ENST00000540022 RBBP5Q15291 538 aaKnown RBP18.13■□□□□ 0.49
TNFRSF1A-213ENST00000540022 PDCD2Q16342 344 aaPredicted RBP18.13■□□□□ 0.49
TNFRSF1A-213ENST00000540022 FRG2Q64ET8 278 aa18.13■□□□□ 0.49
TNFRSF1A-213ENST00000540022 FBXO42Q6P3S6 717 aa18.13■□□□□ 0.49
TNFRSF1A-213ENST00000540022 SCIMPQ6UWF3 145 aa18.13■□□□□ 0.49
TNFRSF1A-213ENST00000540022 MAVSQ7Z434 540 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms