RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 CATSPEREQ5SY80 951 aa12.91□□□□□ -0.34
VPS33B-202ENST00000535906 ANKRD26P1Q6NSI1 321 aa12.91□□□□□ -0.34
VPS33B-202ENST00000535906 SLCO4C1Q6ZQN7 724 aa12.91□□□□□ -0.34
VPS33B-202ENST00000535906 ZNF765Q7L2R6 523 aa12.91□□□□□ -0.34
VPS33B-202ENST00000535906 GET4Q7L5D6 327 aaPredicted RBP12.91□□□□□ -0.34
VPS33B-202ENST00000535906 TMPRSS11BQ86T26 416 aa12.91□□□□□ -0.34
VPS33B-202ENST00000535906 SYTL1Q8IYJ3 562 aa12.91□□□□□ -0.34
VPS33B-202ENST00000535906 CDC26Q8NHZ8 85 aa12.91□□□□□ -0.34
VPS33B-202ENST00000535906 SDCCAG3Q96C92 435 aa12.91□□□□□ -0.34
VPS33B-202ENST00000535906 TUBA1CQ9BQE3 449 aa12.91□□□□□ -0.34
VPS33B-202ENST00000535906 ZCCHC2Q9C0B9 1178 aaKnown RBP12.91□□□□□ -0.34
VPS33B-202ENST00000535906 MTIF3Q9H2K0 278 aaKnown RBP12.91□□□□□ -0.34
VPS33B-202ENST00000535906 BRF2Q9HAW0 419 aa12.91□□□□□ -0.34
VPS33B-202ENST00000535906 TRIM39Q9HCM9 518 aa12.91□□□□□ -0.34
VPS33B-202ENST00000535906 RUVBL1Q9Y265 456 aaKnown RBP12.91□□□□□ -0.34
VPS33B-202ENST00000535906 BTBD3Q9Y2F9 522 aa12.91□□□□□ -0.34
VPS33B-202ENST00000535906 KCNE2Q9Y6J6 123 aa12.91□□□□□ -0.34
VPS33B-202ENST00000535906 KIAA1549LQ6ZVL6 1849 aa12.91□□□□□ -0.34
VPS33B-202ENST00000535906 TBC1D3BA6NDS4 549 aa12.91□□□□□ -0.34
VPS33B-202ENST00000535906 SERPINA1P01009 418 aa12.91□□□□□ -0.34
VPS33B-202ENST00000535906 CST1P01037 141 aa12.91□□□□□ -0.34
VPS33B-202ENST00000535906 COX7A2P14406 83 aa12.91□□□□□ -0.34
VPS33B-202ENST00000535906 PCSK2P16519 638 aa12.91□□□□□ -0.34
VPS33B-202ENST00000535906 NPPBP16860 134 aa12.91□□□□□ -0.34
VPS33B-202ENST00000535906 IL12RB1P42701 662 aa12.91□□□□□ -0.34
VPS33B-202ENST00000535906 YAP1P46937 504 aaKnown RBP12.91□□□□□ -0.34
VPS33B-202ENST00000535906 SRSF11Q05519 484 aaKnown RBP12.91□□□□□ -0.34
VPS33B-202ENST00000535906 LAPTM5Q13571 262 aa12.91□□□□□ -0.34
VPS33B-202ENST00000535906 TSTA3Q13630 321 aaPredicted RBP12.91□□□□□ -0.34
VPS33B-202ENST00000535906 E2F2Q14209 437 aa12.91□□□□□ -0.34
VPS33B-202ENST00000535906 NFE2L1Q14494 772 aa12.91□□□□□ -0.34
VPS33B-202ENST00000535906 DPY19L1Q2PZI1 675 aa12.91□□□□□ -0.34
VPS33B-202ENST00000535906 TANGO2Q6ICL3 276 aa12.91□□□□□ -0.34
VPS33B-202ENST00000535906 CRTC3Q6UUV7 619 aa12.91□□□□□ -0.34
VPS33B-202ENST00000535906 MSANTD1Q6ZTZ1 278 aa12.91□□□□□ -0.34
VPS33B-202ENST00000535906 ERN2Q76MJ5 926 aaKnown RBP12.91□□□□□ -0.34
VPS33B-202ENST00000535906 TRMT11Q7Z4G4 463 aaKnown RBP12.91□□□□□ -0.34
VPS33B-202ENST00000535906 C1orf52Q8N6N3 182 aaKnown RBP12.91□□□□□ -0.34
VPS33B-202ENST00000535906 PLA2G15Q8NCC3 412 aa12.91□□□□□ -0.34
VPS33B-202ENST00000535906 FBXO15Q8NCQ5 510 aaPredicted RBP12.91□□□□□ -0.34
VPS33B-202ENST00000535906 OR10Q1Q8NGQ4 319 aa12.91□□□□□ -0.34
VPS33B-202ENST00000535906 PPP1R16AQ96I34 528 aa12.91□□□□□ -0.34
VPS33B-202ENST00000535906 PANX1Q96RD7 426 aa12.91□□□□□ -0.34
VPS33B-202ENST00000535906 HCN2Q9UL51 889 aa12.91□□□□□ -0.34
VPS33B-202ENST00000535906 FPGTO14772 594 aa12.9□□□□□ -0.34
VPS33B-202ENST00000535906 POP7O75817 140 aaKnown RBP12.9□□□□□ -0.34
VPS33B-202ENST00000535906 CPNE6O95741 557 aa12.9□□□□□ -0.34
VPS33B-202ENST00000535906 LAMP1P11279 417 aa12.9□□□□□ -0.34
VPS33B-202ENST00000535906 HSD3B1P14060 373 aa12.9□□□□□ -0.34
VPS33B-202ENST00000535906 EFNA1P20827 205 aaPredicted RBP12.9□□□□□ -0.34
VPS33B-202ENST00000535906 FCARP24071 287 aa12.9□□□□□ -0.34
VPS33B-202ENST00000535906 HSD3B2P26439 372 aa12.9□□□□□ -0.34
VPS33B-202ENST00000535906 SHMT2P34897 504 aa12.9□□□□□ -0.34
VPS33B-202ENST00000535906 P2RY2P41231 377 aa12.9□□□□□ -0.34
VPS33B-202ENST00000535906 ABHD18Q0P651 414 aa12.9□□□□□ -0.34
VPS33B-202ENST00000535906 EPS8Q12929 822 aa12.9□□□□□ -0.34
VPS33B-202ENST00000535906 STARD3Q14849 445 aa12.9□□□□□ -0.34
VPS33B-202ENST00000535906 DUOXA1Q1HG43 343 aa12.9□□□□□ -0.34
VPS33B-202ENST00000535906 C9orf50Q5SZB4 431 aa12.9□□□□□ -0.34
VPS33B-202ENST00000535906 ZNF773Q6PK81 442 aa12.9□□□□□ -0.34
VPS33B-202ENST00000535906 CLECL1Q8IZS7 167 aa12.9□□□□□ -0.34
VPS33B-202ENST00000535906 SVOPLQ8N434 492 aa12.9□□□□□ -0.34
VPS33B-202ENST00000535906 OR8J2Q8NGG1 315 aa12.9□□□□□ -0.34
VPS33B-202ENST00000535906 NELL1Q92832 810 aa12.9□□□□□ -0.34
VPS33B-202ENST00000535906 REXO5Q96IC2 774 aaKnown RBP12.9□□□□□ -0.34
VPS33B-202ENST00000535906 CNDP2Q96KP4 475 aaKnown RBP12.9□□□□□ -0.34
VPS33B-202ENST00000535906 ING2Q9H160 280 aa12.9□□□□□ -0.34
VPS33B-202ENST00000535906 DYRK4Q9NR20 520 aa12.9□□□□□ -0.34
VPS33B-202ENST00000535906 PRKAB1Q9Y478 270 aa12.9□□□□□ -0.34
VPS33B-202ENST00000535906 H3BMQ9 156 aa12.9□□□□□ -0.34
VPS33B-202ENST00000535906 CLIC1O00299 241 aa12.9□□□□□ -0.34
VPS33B-202ENST00000535906 PRMT3O60678 531 aa12.9□□□□□ -0.34
VPS33B-202ENST00000535906 ATE1O95260 518 aa12.9□□□□□ -0.34
VPS33B-202ENST00000535906 ELK4P28324 431 aa12.9□□□□□ -0.34
VPS33B-202ENST00000535906 OPRD1P41143 372 aa12.9□□□□□ -0.34
VPS33B-202ENST00000535906 TRPC1P48995 793 aa12.9□□□□□ -0.34
VPS33B-202ENST00000535906 DUSP6Q16828 381 aa12.9□□□□□ -0.34
VPS33B-202ENST00000535906 TMEM52BQ4KMG9 183 aa12.9□□□□□ -0.34
VPS33B-202ENST00000535906 TTC23Q5W5X9 447 aa12.9□□□□□ -0.34
VPS33B-202ENST00000535906 CAPN13Q6MZZ7 669 aaPredicted RBP12.9□□□□□ -0.34
VPS33B-202ENST00000535906 CHST15Q7LFX5 561 aaPredicted RBP12.9□□□□□ -0.34
VPS33B-202ENST00000535906 THAP5Q7Z6K1 395 aa12.9□□□□□ -0.34
VPS33B-202ENST00000535906 C11orf96Q7Z7L8 435 aa12.9□□□□□ -0.34
VPS33B-202ENST00000535906 HS3ST5Q8IZT8 346 aa12.9□□□□□ -0.34
VPS33B-202ENST00000535906 GPR156Q8NFN8 814 aa12.9□□□□□ -0.34
VPS33B-202ENST00000535906 FAM81AQ8TBF8 368 aa12.9□□□□□ -0.34
VPS33B-202ENST00000535906 CHTF18Q8WVB6 975 aa12.9□□□□□ -0.34
VPS33B-202ENST00000535906 SUSD6Q92537 303 aa12.9□□□□□ -0.34
VPS33B-202ENST00000535906 COG8Q96MW5 612 aa12.9□□□□□ -0.34
VPS33B-202ENST00000535906 OSBPL10Q9BXB5 764 aa12.9□□□□□ -0.34
VPS33B-202ENST00000535906 TOR3AQ9H497 397 aa12.9□□□□□ -0.34
VPS33B-202ENST00000535906 MAGIXQ9H6Y5 334 aa12.9□□□□□ -0.34
VPS33B-202ENST00000535906 SFXN1Q9H9B4 322 aa12.9□□□□□ -0.34
VPS33B-202ENST00000535906 PRSS16Q9NQE7 514 aa12.9□□□□□ -0.34
VPS33B-202ENST00000535906 USE1Q9NZ43 259 aa12.9□□□□□ -0.34
VPS33B-202ENST00000535906 TMEM98Q9Y2Y6 226 aa12.9□□□□□ -0.34
VPS33B-202ENST00000535906 COL4A3Q01955 1670 aa12.89□□□□□ -0.35
VPS33B-202ENST00000535906 GABRR3A8MPY1 467 aa12.89□□□□□ -0.35
VPS33B-202ENST00000535906 EPHX1P07099 455 aa12.89□□□□□ -0.35
VPS33B-202ENST00000535906 ENGP17813 658 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms