RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 MFSD4AQ8N468 514 aa18.73■□□□□ 0.59
CAPN1-226ENST00000533820 ARL14EPQ8N8R7 260 aaPredicted RBP18.73■□□□□ 0.59
CAPN1-226ENST00000533820 UPF1Q92900 1129 aaKnown RBP eCLIP18.73■□□□□ 0.592e-10■■■■□ 24.6
CAPN1-226ENST00000533820 FOXJ1Q92949 421 aa18.73■□□□□ 0.59
CAPN1-226ENST00000533820 ZHX1-C8orf76Q96EF9 292 aa18.73■□□□□ 0.59
CAPN1-226ENST00000533820 DACH2Q96NX9 599 aa18.73■□□□□ 0.59
CAPN1-226ENST00000533820 C6orf62Q9GZU0 229 aaPredicted RBP18.73■□□□□ 0.59
CAPN1-226ENST00000533820 IL1RAPQ9NPH3 570 aa18.73■□□□□ 0.59
CAPN1-226ENST00000533820 ACOT13Q9NPJ3 140 aa18.73■□□□□ 0.59
CAPN1-226ENST00000533820 NAALAD2Q9Y3Q0 740 aa18.73■□□□□ 0.59
CAPN1-226ENST00000533820 PCDHGA12O60330 932 aa18.72■□□□□ 0.59
CAPN1-226ENST00000533820 TSPAN9O75954 239 aa18.72■□□□□ 0.59
CAPN1-226ENST00000533820 MYCP01106 439 aaPredicted RBP18.72■□□□□ 0.59
CAPN1-226ENST00000533820 RPLP2P05387 115 aaKnown RBP18.72■□□□□ 0.59
CAPN1-226ENST00000533820 STK19P49842 368 aaPredicted RBP18.72■□□□□ 0.59
CAPN1-226ENST00000533820 RPP38P78345 283 aaKnown RBP18.72■□□□□ 0.59
CAPN1-226ENST00000533820 FAM26DQ5JW98 314 aa18.72■□□□□ 0.59
CAPN1-226ENST00000533820 ADNP2Q6IQ32 1131 aa18.72■□□□□ 0.59
CAPN1-226ENST00000533820 SERPINA13PQ6UXR4 307 aa18.72■□□□□ 0.59
CAPN1-226ENST00000533820 CHST9Q7L1S5 443 aa18.72■□□□□ 0.59
CAPN1-226ENST00000533820 HOXD1Q9GZZ0 328 aa18.72■□□□□ 0.59
CAPN1-226ENST00000533820 DUSP21Q9H596 190 aa18.72■□□□□ 0.59
CAPN1-226ENST00000533820 SLCO3A1Q9UIG8 710 aa18.72■□□□□ 0.59
CAPN1-226ENST00000533820 CASP8AP2Q9UKL3 1982 aa18.72■□□□□ 0.59
CAPN1-226ENST00000533820 WNT9AO14904 365 aa18.72■□□□□ 0.59
CAPN1-226ENST00000533820 CCNDBP1O95273 360 aa18.72■□□□□ 0.59
CAPN1-226ENST00000533820 DBTP11182 482 aaKnown RBP18.72■□□□□ 0.59
CAPN1-226ENST00000533820 COX7A2P14406 83 aa18.72■□□□□ 0.59
CAPN1-226ENST00000533820 TTLL9Q3SXZ7 439 aa18.72■□□□□ 0.59
CAPN1-226ENST00000533820 PRSS36Q5K4E3 855 aa18.72■□□□□ 0.59
CAPN1-226ENST00000533820 LRIF1Q5T3J3 769 aa18.72■□□□□ 0.59
CAPN1-226ENST00000533820 TXNDC8Q6A555 127 aa18.72■□□□□ 0.59
CAPN1-226ENST00000533820 ELMOD2Q8IZ81 293 aa18.72■□□□□ 0.59
CAPN1-226ENST00000533820 PLD4Q96BZ4 506 aa18.72■□□□□ 0.59
CAPN1-226ENST00000533820 APOL4Q9BPW4 351 aa18.72■□□□□ 0.59
CAPN1-226ENST00000533820 TTLL2Q9BWV7 592 aa18.72■□□□□ 0.59
CAPN1-226ENST00000533820 THUMPD1Q9NXG2 353 aaKnown RBP18.72■□□□□ 0.59
CAPN1-226ENST00000533820 LOC100506127A0A0U1RQW1 187 aa18.72■□□□□ 0.59
CAPN1-226ENST00000533820 YY2O15391 372 aa18.72■□□□□ 0.59
CAPN1-226ENST00000533820 KDELR2P33947 212 aa18.72■□□□□ 0.59
CAPN1-226ENST00000533820 DGKEP52429 567 aa18.72■□□□□ 0.59
CAPN1-226ENST00000533820 FCGRTP55899 365 aa18.72■□□□□ 0.59
CAPN1-226ENST00000533820 MAD2L1BPQ15013 274 aaPredicted RBP18.72■□□□□ 0.59
CAPN1-226ENST00000533820 COLEC12Q5KU26 742 aa18.72■□□□□ 0.59
CAPN1-226ENST00000533820 NOXRED1Q6NXP6 359 aa18.72■□□□□ 0.59
CAPN1-226ENST00000533820 PLPP6Q8IY26 295 aa18.72■□□□□ 0.59
CAPN1-226ENST00000533820 OR6Q1Q8NGQ2 317 aa18.72■□□□□ 0.59
CAPN1-226ENST00000533820 SH3KBP1Q96B97 665 aa18.72■□□□□ 0.59
CAPN1-226ENST00000533820 YIPF6Q96EC8 236 aa18.72■□□□□ 0.59
CAPN1-226ENST00000533820 ZNF300Q96RE9 604 aaPredicted RBP18.72■□□□□ 0.59
CAPN1-226ENST00000533820 RNF167Q9H6Y7 350 aa18.72■□□□□ 0.59
CAPN1-226ENST00000533820 REEP1Q9H902 201 aa18.72■□□□□ 0.59
CAPN1-226ENST00000533820 FKBP14Q9NWM8 211 aa18.72■□□□□ 0.59
CAPN1-226ENST00000533820 KCNK5O95279 499 aa18.71■□□□□ 0.59
CAPN1-226ENST00000533820 ITGAMP11215 1152 aa18.71■□□□□ 0.59
CAPN1-226ENST00000533820 CHIT1Q13231 466 aa18.71■□□□□ 0.59
CAPN1-226ENST00000533820 VMACQ2NL98 169 aa18.71■□□□□ 0.59
CAPN1-226ENST00000533820 KDM4DQ6B0I6 523 aa18.71■□□□□ 0.59
CAPN1-226ENST00000533820 MCFD2Q8NI22 146 aa18.71■□□□□ 0.59
CAPN1-226ENST00000533820 DYNC2LI1Q8TCX1 351 aa18.71■□□□□ 0.59
CAPN1-226ENST00000533820 DNASE1L2Q92874 299 aa18.71■□□□□ 0.59
CAPN1-226ENST00000533820 SNX6Q9UNH7 406 aa18.71■□□□□ 0.59
CAPN1-226ENST00000533820 BTBD3Q9Y2F9 522 aa18.71■□□□□ 0.59
CAPN1-226ENST00000533820 TESMINQ9Y4I5 508 aa18.71■□□□□ 0.59
CAPN1-226ENST00000533820 PABPN1LA6NDY0 278 aaKnown RBP18.71■□□□□ 0.59
CAPN1-226ENST00000533820 EFCAB9A8MZ26 197 aa18.71■□□□□ 0.59
CAPN1-226ENST00000533820 HIST1H2AGP0C0S8 130 aaPredicted RBP18.71■□□□□ 0.59
CAPN1-226ENST00000533820 HIST1H2ADP20671 130 aa18.71■□□□□ 0.59
CAPN1-226ENST00000533820 DNAJA1P31689 397 aaKnown RBP18.71■□□□□ 0.59
CAPN1-226ENST00000533820 SPAM1P38567 509 aa18.71■□□□□ 0.59
CAPN1-226ENST00000533820 SERPINB10P48595 397 aa18.71■□□□□ 0.59
CAPN1-226ENST00000533820 RACK1P63244 317 aaKnown RBP18.71■□□□□ 0.59
CAPN1-226ENST00000533820 ACOX1Q15067 660 aa18.71■□□□□ 0.59
CAPN1-226ENST00000533820 CDONQ4KMG0 1287 aa18.71■□□□□ 0.59
CAPN1-226ENST00000533820 PMEPA1Q969W9 287 aa18.71■□□□□ 0.59
CAPN1-226ENST00000533820 HIST1H2AHQ96KK5 128 aa18.71■□□□□ 0.59
CAPN1-226ENST00000533820 CDK5RAP1Q96SZ6 601 aaKnown RBP18.71■□□□□ 0.59
CAPN1-226ENST00000533820 HIST1H2AJQ99878 128 aa18.71■□□□□ 0.59
CAPN1-226ENST00000533820 H2AFJQ9BTM1 129 aa18.71■□□□□ 0.59
CAPN1-226ENST00000533820 GIMAP4Q9NUV9 329 aa18.71■□□□□ 0.59
CAPN1-226ENST00000533820 H7C4K7 107 aa18.7■□□□□ 0.58
CAPN1-226ENST00000533820 HOXC11O43248 304 aaPredicted RBP18.7■□□□□ 0.58
CAPN1-226ENST00000533820 TBX1O43435 398 aa18.7■□□□□ 0.58
CAPN1-226ENST00000533820 EPN2O95208 641 aa18.7■□□□□ 0.58
CAPN1-226ENST00000533820 LAMP1P11279 417 aa18.7■□□□□ 0.58
CAPN1-226ENST00000533820 RPS3P23396 243 aaKnown RBP eCLIP18.7■□□□□ 0.581e-12■□□□□ 9.8
CAPN1-226ENST00000533820 IDH2P48735 452 aaKnown RBP18.7■□□□□ 0.58
CAPN1-226ENST00000533820 TSTA3Q13630 321 aaPredicted RBP18.7■□□□□ 0.58
CAPN1-226ENST00000533820 ZNF648Q5T619 568 aaPredicted RBP18.7■□□□□ 0.58
CAPN1-226ENST00000533820 AGAP7PQ5VUJ5 663 aa18.7■□□□□ 0.58
CAPN1-226ENST00000533820 LRRC66Q68CR7 880 aa18.7■□□□□ 0.58
CAPN1-226ENST00000533820 GALNT13Q8IUC8 556 aa18.7■□□□□ 0.58
CAPN1-226ENST00000533820 HS6ST3Q8IZP7 471 aa18.7■□□□□ 0.58
CAPN1-226ENST00000533820 PCSK9Q8NBP7 692 aaKnown RBP18.7■□□□□ 0.58
CAPN1-226ENST00000533820 NELL1Q92832 810 aa18.7■□□□□ 0.58
CAPN1-226ENST00000533820 P2RY13Q9BPV8 354 aa18.7■□□□□ 0.58
CAPN1-226ENST00000533820 PSD2Q9BQI7 771 aa18.7■□□□□ 0.58
CAPN1-226ENST00000533820 TRIM39Q9HCM9 518 aa18.7■□□□□ 0.58
CAPN1-226ENST00000533820 TM9SF3Q9HD45 589 aa18.7■□□□□ 0.58
CAPN1-226ENST00000533820 PCP4L1A6NKN8 68 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms