RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 P4HTMQ9NXG6 502 aa11.54□□□□□ -0.56
TRAPPC4-209ENST00000528230 ZNF282Q9UDV7 671 aaPredicted RBP11.54□□□□□ -0.56
TRAPPC4-209ENST00000528230 G3BP2Q9UN86 482 aaKnown RBP11.54□□□□□ -0.56
TRAPPC4-209ENST00000528230 TP53TG5Q9Y2B4 290 aa11.54□□□□□ -0.56
TRAPPC4-209ENST00000528230 MTO1Q9Y2Z2 717 aaKnown RBP11.54□□□□□ -0.56
TRAPPC4-209ENST00000528230 PCSK5Q92824 1860 aa11.54□□□□□ -0.56
TRAPPC4-209ENST00000528230 KALRNO60229 2985 aa11.54□□□□□ -0.56
TRAPPC4-209ENST00000528230 K7EM74 188 aa11.53□□□□□ -0.56
TRAPPC4-209ENST00000528230 ANXA5P08758 320 aa11.53□□□□□ -0.56
TRAPPC4-209ENST00000528230 STX2P32856 288 aa11.53□□□□□ -0.56
TRAPPC4-209ENST00000528230 SPRP35270 261 aaPredicted RBP11.53□□□□□ -0.56
TRAPPC4-209ENST00000528230 SLC26A3P40879 764 aa11.53□□□□□ -0.56
TRAPPC4-209ENST00000528230 CASRP41180 1078 aa11.53□□□□□ -0.56
TRAPPC4-209ENST00000528230 HNMTP50135 292 aa11.53□□□□□ -0.56
TRAPPC4-209ENST00000528230 CCR8P51685 355 aa11.53□□□□□ -0.56
TRAPPC4-209ENST00000528230 PGDP52209 483 aa11.53□□□□□ -0.56
TRAPPC4-209ENST00000528230 SOX8P57073 446 aa11.53□□□□□ -0.56
TRAPPC4-209ENST00000528230 SLC7A5Q01650 507 aa11.53□□□□□ -0.56
TRAPPC4-209ENST00000528230 OCA2Q04671 838 aa11.53□□□□□ -0.56
TRAPPC4-209ENST00000528230 CHAF1BQ13112 559 aa11.53□□□□□ -0.56
TRAPPC4-209ENST00000528230 NAB1Q13506 487 aa11.53□□□□□ -0.56
TRAPPC4-209ENST00000528230 DSG2Q14126 1118 aa11.53□□□□□ -0.56
TRAPPC4-209ENST00000528230 HKDC1Q2TB90 917 aa11.53□□□□□ -0.56
TRAPPC4-209ENST00000528230 GLE1Q53GS7 698 aaKnown RBP11.53□□□□□ -0.56
TRAPPC4-209ENST00000528230 DCAF10Q5QP82 559 aa11.53□□□□□ -0.56
TRAPPC4-209ENST00000528230 GRTP1Q5TC63 336 aa11.53□□□□□ -0.56
TRAPPC4-209ENST00000528230 CEP128Q6ZU80 1094 aa11.53□□□□□ -0.56
TRAPPC4-209ENST00000528230 PPP1R32Q7Z5V6 425 aa11.53□□□□□ -0.56
TRAPPC4-209ENST00000528230 ADAMTSL2Q86TH1 951 aa11.53□□□□□ -0.56
TRAPPC4-209ENST00000528230 CCDC25Q86WR0 208 aa11.53□□□□□ -0.56
TRAPPC4-209ENST00000528230 ANKRD49Q8WVL7 239 aa11.53□□□□□ -0.56
TRAPPC4-209ENST00000528230 ZNF592Q92610 1267 aa11.53□□□□□ -0.56
TRAPPC4-209ENST00000528230 ALKBH8Q96BT7 664 aaKnown RBP11.53□□□□□ -0.56
TRAPPC4-209ENST00000528230 TM4SF19Q96DZ7 209 aa11.53□□□□□ -0.56
TRAPPC4-209ENST00000528230 GPR22Q99680 433 aa11.53□□□□□ -0.56
TRAPPC4-209ENST00000528230 DERL2Q9GZP9 239 aa11.53□□□□□ -0.56
TRAPPC4-209ENST00000528230 TSPYL1Q9H0U9 437 aa11.53□□□□□ -0.56
TRAPPC4-209ENST00000528230 ZDHHC18Q9NUE0 388 aa11.53□□□□□ -0.56
TRAPPC4-209ENST00000528230 CTNNAL1Q9UBT7 734 aa11.53□□□□□ -0.56
TRAPPC4-209ENST00000528230 IKZF3Q9UKT9 509 aa11.53□□□□□ -0.56
TRAPPC4-209ENST00000528230 ZNF451Q9Y4E5 1061 aa11.53□□□□□ -0.56
TRAPPC4-209ENST00000528230 OARD1Q9Y530 152 aa11.53□□□□□ -0.56
TRAPPC4-209ENST00000528230 MAU2Q9Y6X3 613 aa11.53□□□□□ -0.56
TRAPPC4-209ENST00000528230 TLN1Q9Y490 2541 aaKnown RBP11.53□□□□□ -0.56
TRAPPC4-209ENST00000528230 SMG1Q96Q15 3661 aaKnown RBP11.52□□□□□ -0.56
TRAPPC4-209ENST00000528230 AGPSO00116 658 aa11.52□□□□□ -0.57
TRAPPC4-209ENST00000528230 CDC7O00311 574 aa11.52□□□□□ -0.57
TRAPPC4-209ENST00000528230 FOXS1O43638 330 aa11.52□□□□□ -0.57
TRAPPC4-209ENST00000528230 PIAS1O75925 651 aa11.52□□□□□ -0.57
TRAPPC4-209ENST00000528230 GUCA1CO95843 209 aa11.52□□□□□ -0.57
TRAPPC4-209ENST00000528230 ZGLP1P0C6A0 271 aa11.52□□□□□ -0.57
TRAPPC4-209ENST00000528230 STMN1P16949 149 aa11.52□□□□□ -0.57
TRAPPC4-209ENST00000528230 FBLP22087 321 aaKnown RBP11.52□□□□□ -0.57
TRAPPC4-209ENST00000528230 ATP6V0D1P61421 351 aa11.52□□□□□ -0.57
TRAPPC4-209ENST00000528230 ZNF460Q14592 562 aa11.52□□□□□ -0.57
TRAPPC4-209ENST00000528230 USP10Q14694 798 aaKnown RBP11.52□□□□□ -0.57
TRAPPC4-209ENST00000528230 ZKSCAN8Q15776 578 aaPredicted RBP11.52□□□□□ -0.57
TRAPPC4-209ENST00000528230 KBTBD12Q3ZCT8 623 aa11.52□□□□□ -0.57
TRAPPC4-209ENST00000528230 CDKL4Q5MAI5 379 aa11.52□□□□□ -0.57
TRAPPC4-209ENST00000528230 VN1R4Q7Z5H5 301 aa11.52□□□□□ -0.57
TRAPPC4-209ENST00000528230 RELL1Q8IUW5 271 aa11.52□□□□□ -0.57
TRAPPC4-209ENST00000528230 PLD3Q8IV08 490 aa11.52□□□□□ -0.57
TRAPPC4-209ENST00000528230 CTAGE3PQ8IX95 158 aa11.52□□□□□ -0.57
TRAPPC4-209ENST00000528230 TBC1D19Q8N5T2 526 aa11.52□□□□□ -0.57
TRAPPC4-209ENST00000528230 METTL27Q8N6F8 245 aaPredicted RBP11.52□□□□□ -0.57
TRAPPC4-209ENST00000528230 TEX19Q8NA77 164 aa11.52□□□□□ -0.57
TRAPPC4-209ENST00000528230 MFSD9Q8NBP5 474 aa11.52□□□□□ -0.57
TRAPPC4-209ENST00000528230 CLEC1AQ8NC01 280 aa11.52□□□□□ -0.57
TRAPPC4-209ENST00000528230 CAMKVQ8NCB2 501 aa11.52□□□□□ -0.57
TRAPPC4-209ENST00000528230 FDCSPQ8NFU4 85 aa11.52□□□□□ -0.57
TRAPPC4-209ENST00000528230 STT3BQ8TCJ2 826 aa11.52□□□□□ -0.57
TRAPPC4-209ENST00000528230 FBF1Q8TES7 1133 aa11.52□□□□□ -0.57
TRAPPC4-209ENST00000528230 MIEF2Q96C03 454 aa11.52□□□□□ -0.57
TRAPPC4-209ENST00000528230 PYCR2Q96C36 320 aa11.52□□□□□ -0.57
TRAPPC4-209ENST00000528230 OR4K3Q96R72 315 aa11.52□□□□□ -0.57
TRAPPC4-209ENST00000528230 SMAD5Q99717 465 aaKnown RBP11.52□□□□□ -0.57
TRAPPC4-209ENST00000528230 TGIF2Q9GZN2 237 aa11.52□□□□□ -0.57
TRAPPC4-209ENST00000528230 DRC3Q9H069 523 aa11.52□□□□□ -0.57
TRAPPC4-209ENST00000528230 MKKSQ9NPJ1 570 aaPredicted RBP11.52□□□□□ -0.57
TRAPPC4-209ENST00000528230 ATP13A2Q9NQ11 1180 aa11.52□□□□□ -0.57
TRAPPC4-209ENST00000528230 C5AR2Q9P296 337 aa11.52□□□□□ -0.57
TRAPPC4-209ENST00000528230 CTSFQ9UBX1 484 aa11.52□□□□□ -0.57
TRAPPC4-209ENST00000528230 SH2B3Q9UQQ2 575 aa11.52□□□□□ -0.57
TRAPPC4-209ENST00000528230 DOCK10Q96BY6 2186 aa11.52□□□□□ -0.57
TRAPPC4-209ENST00000528230 SCN3AQ9NY46 2000 aa11.52□□□□□ -0.57
TRAPPC4-209ENST00000528230 TRBC2A0A5B9 178 aa11.51□□□□□ -0.57
TRAPPC4-209ENST00000528230 ESYT3A0FGR9 886 aa11.51□□□□□ -0.57
TRAPPC4-209ENST00000528230 CTAGE15A4D2H0 777 aa11.51□□□□□ -0.57
TRAPPC4-209ENST00000528230 NPEPPSL1A6NEC2 478 aa11.51□□□□□ -0.57
TRAPPC4-209ENST00000528230 H0YIG0 161 aa11.51□□□□□ -0.57
TRAPPC4-209ENST00000528230 PCDH17O14917 1159 aa11.51□□□□□ -0.57
TRAPPC4-209ENST00000528230 P2RX6O15547 441 aa11.51□□□□□ -0.57
TRAPPC4-209ENST00000528230 LCMT2O60294 686 aaKnown RBP11.51□□□□□ -0.57
TRAPPC4-209ENST00000528230 PDGFAP04085 211 aa11.51□□□□□ -0.57
TRAPPC4-209ENST00000528230 CTAGE8P0CG41 777 aa11.51□□□□□ -0.57
TRAPPC4-209ENST00000528230 CDH1P12830 882 aa11.51□□□□□ -0.57
TRAPPC4-209ENST00000528230 NR1D1P20393 614 aa11.51□□□□□ -0.57
TRAPPC4-209ENST00000528230 AVPR1BP47901 424 aa11.51□□□□□ -0.57
TRAPPC4-209ENST00000528230 RAB10P61026 200 aa11.51□□□□□ -0.57
TRAPPC4-209ENST00000528230 KLC1Q07866 573 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms