RNA–Protein interactions for RNA: ENST00000526271.2

CPSF1-201, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-201ENST00000526271 GNPTGQ9UJJ9 305 aa13.5□□□□□ -0.25
CPSF1-201ENST00000526271 HCFC1P51610 2035 aa13.49□□□□□ -0.25
CPSF1-201ENST00000526271 ADAM10O14672 748 aa13.49□□□□□ -0.25
CPSF1-201ENST00000526271 SLC19A2O60779 497 aa13.49□□□□□ -0.25
CPSF1-201ENST00000526271 DNAJB6O75190 326 aa13.49□□□□□ -0.25
CPSF1-201ENST00000526271 ZNF189O75820 626 aaPredicted RBP13.49□□□□□ -0.25
CPSF1-201ENST00000526271 RASAL1O95294 804 aa13.49□□□□□ -0.25
CPSF1-201ENST00000526271 SLC16A8O95907 504 aa13.49□□□□□ -0.25
CPSF1-201ENST00000526271 HEXBP07686 556 aa13.49□□□□□ -0.25
CPSF1-201ENST00000526271 CMPK1P30085 196 aa13.49□□□□□ -0.25
CPSF1-201ENST00000526271 STIP1P31948 543 aaKnown RBP13.49□□□□□ -0.25
CPSF1-201ENST00000526271 PTGER4P35408 488 aa13.49□□□□□ -0.25
CPSF1-201ENST00000526271 CLCN7P51798 805 aa13.49□□□□□ -0.25
CPSF1-201ENST00000526271 PRDX1Q06830 199 aaKnown RBP13.49□□□□□ -0.25
CPSF1-201ENST00000526271 TMED2Q15363 201 aa13.49□□□□□ -0.25
CPSF1-201ENST00000526271 RNFT1Q5M7Z0 435 aa13.49□□□□□ -0.25
CPSF1-201ENST00000526271 ZNF468Q5VIY5 522 aaPredicted RBP13.49□□□□□ -0.25
CPSF1-201ENST00000526271 ICE2Q659A1 982 aa13.49□□□□□ -0.25
CPSF1-201ENST00000526271 CYHR1Q6ZMK1 362 aa13.49□□□□□ -0.25
CPSF1-201ENST00000526271 Q6ZPB1 254 aaPredicted RBP13.49□□□□□ -0.25
CPSF1-201ENST00000526271 GDF7Q7Z4P5 450 aa13.49□□□□□ -0.25
CPSF1-201ENST00000526271 ZNF227Q86WZ6 799 aa13.49□□□□□ -0.25
CPSF1-201ENST00000526271 PDSS2Q86YH6 399 aa13.49□□□□□ -0.25
CPSF1-201ENST00000526271 SLC13A5Q86YT5 568 aaPredicted RBP13.49□□□□□ -0.25
CPSF1-201ENST00000526271 BEST3Q8N1M1 668 aa13.49□□□□□ -0.25
CPSF1-201ENST00000526271 PPHLN1Q8NEY8 458 aaKnown RBP13.49□□□□□ -0.25
CPSF1-201ENST00000526271 OR9A4Q8NGU2 314 aa13.49□□□□□ -0.25
CPSF1-201ENST00000526271 TRIM44Q96DX7 344 aaPredicted RBP13.49□□□□□ -0.25
CPSF1-201ENST00000526271 PANX3Q96QZ0 392 aa13.49□□□□□ -0.25
CPSF1-201ENST00000526271 KIFC1Q9BW19 673 aa13.49□□□□□ -0.25
CPSF1-201ENST00000526271 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.49□□□□□ -0.25
CPSF1-201ENST00000526271 MRPS30Q9NP92 439 aaKnown RBP13.49□□□□□ -0.25
CPSF1-201ENST00000526271 MKKSQ9NPJ1 570 aaPredicted RBP13.49□□□□□ -0.25
CPSF1-201ENST00000526271 C14orf105Q9NVL8 296 aa13.49□□□□□ -0.25
CPSF1-201ENST00000526271 PCYOX1Q9UHG3 505 aa13.49□□□□□ -0.25
CPSF1-201ENST00000526271 MKL2Q9ULH7 1088 aa13.49□□□□□ -0.25
CPSF1-201ENST00000526271 MAP1AP78559 2803 aaPredicted RBP13.49□□□□□ -0.25
CPSF1-201ENST00000526271 INTS1Q8N201 2190 aaKnown RBP13.48□□□□□ -0.25
CPSF1-201ENST00000526271 MIF4GDA9UHW6 222 aaKnown RBP13.48□□□□□ -0.25
CPSF1-201ENST00000526271 WFS1O76024 890 aa13.48□□□□□ -0.25
CPSF1-201ENST00000526271 VAPBO95292 243 aa13.48□□□□□ -0.25
CPSF1-201ENST00000526271 MGAT1P26572 445 aa13.48□□□□□ -0.25
CPSF1-201ENST00000526271 ATP5DP30049 168 aa13.48□□□□□ -0.25
CPSF1-201ENST00000526271 CCNFP41002 786 aa13.48□□□□□ -0.25
CPSF1-201ENST00000526271 CETN2P41208 172 aa13.48□□□□□ -0.25
CPSF1-201ENST00000526271 RIPPLY3P57055 190 aa13.48□□□□□ -0.25
CPSF1-201ENST00000526271 ZNF33BQ06732 778 aa13.48□□□□□ -0.25
CPSF1-201ENST00000526271 TUBA3CQ13748 450 aa13.48□□□□□ -0.25
CPSF1-201ENST00000526271 KLHL38Q2WGJ6 581 aa13.48□□□□□ -0.25
CPSF1-201ENST00000526271 AARS2Q5JTZ9 985 aaKnown RBP13.48□□□□□ -0.25
CPSF1-201ENST00000526271 ZNF549Q6P9A3 640 aa13.48□□□□□ -0.25
CPSF1-201ENST00000526271 TUBA3EQ6PEY2 450 aa13.48□□□□□ -0.25
CPSF1-201ENST00000526271 SYCE1Q8N0S2 351 aa13.48□□□□□ -0.25
CPSF1-201ENST00000526271 MPP5Q8N3R9 675 aa13.48□□□□□ -0.25
CPSF1-201ENST00000526271 DNAJB8Q8NHS0 232 aa13.48□□□□□ -0.25
CPSF1-201ENST00000526271 SKA2Q8WVK7 121 aaPredicted RBP13.48□□□□□ -0.25
CPSF1-201ENST00000526271 SMPDL3AQ92484 453 aa13.48□□□□□ -0.25
CPSF1-201ENST00000526271 MOCOSQ96EN8 888 aa13.48□□□□□ -0.25
CPSF1-201ENST00000526271 SCMH1Q96GD3 660 aa13.48□□□□□ -0.25
CPSF1-201ENST00000526271 TTC1Q99614 292 aa13.48□□□□□ -0.25
CPSF1-201ENST00000526271 YIPF2Q9BWQ6 316 aa13.48□□□□□ -0.25
CPSF1-201ENST00000526271 TSSK1BQ9BXA7 367 aa13.48□□□□□ -0.25
CPSF1-201ENST00000526271 DRC3Q9H069 523 aa13.48□□□□□ -0.25
CPSF1-201ENST00000526271 ANKRD10Q9NXR5 420 aa13.48□□□□□ -0.25
CPSF1-201ENST00000526271 STMN3Q9NZ72 180 aa13.48□□□□□ -0.25
CPSF1-201ENST00000526271 ZKSCAN5Q9Y2L8 839 aa13.48□□□□□ -0.25
CPSF1-201ENST00000526271 CRYL1Q9Y2S2 319 aa13.48□□□□□ -0.25
CPSF1-201ENST00000526271 ZNF407Q9C0G0 2248 aa13.48□□□□□ -0.25
CPSF1-201ENST00000526271 DNAJC13O75165 2243 aa13.47□□□□□ -0.25
CPSF1-201ENST00000526271 ASPDHA6ND91 283 aa13.47□□□□□ -0.25
CPSF1-201ENST00000526271 NDUFS3O75489 264 aa13.47□□□□□ -0.25
CPSF1-201ENST00000526271 ERVK-10P10266 1014 aa13.47□□□□□ -0.25
CPSF1-201ENST00000526271 CD96P40200 585 aa13.47□□□□□ -0.25
CPSF1-201ENST00000526271 NR0B1P51843 470 aaKnown RBP13.47□□□□□ -0.25
CPSF1-201ENST00000526271 PNLIPRP1P54315 467 aa13.47□□□□□ -0.25
CPSF1-201ENST00000526271 HSF1Q00613 529 aa13.47□□□□□ -0.25
CPSF1-201ENST00000526271 TIAL1Q01085 375 aaKnown RBP eCLIP13.47□□□□□ -0.25
CPSF1-201ENST00000526271 ZNF766Q5HY98 468 aa13.47□□□□□ -0.25
CPSF1-201ENST00000526271 GARNL3Q5VVW2 1013 aa13.47□□□□□ -0.25
CPSF1-201ENST00000526271 SPINK14Q6IE38 97 aa13.47□□□□□ -0.25
CPSF1-201ENST00000526271 ANKRD37Q7Z713 158 aa13.47□□□□□ -0.25
CPSF1-201ENST00000526271 LRRC6Q86X45 466 aa13.47□□□□□ -0.25
CPSF1-201ENST00000526271 CRLF3Q8IUI8 442 aa13.47□□□□□ -0.25
CPSF1-201ENST00000526271 AGGF1Q8N302 714 aaeCLIP13.47□□□□□ -0.25
CPSF1-201ENST00000526271 UBL4BQ8N7F7 174 aa13.47□□□□□ -0.25
CPSF1-201ENST00000526271 VPS50Q96JG6 964 aa13.47□□□□□ -0.25
CPSF1-201ENST00000526271 GPR137Q96N19 417 aa13.47□□□□□ -0.25
CPSF1-201ENST00000526271 FRMD6Q96NE9 622 aa13.47□□□□□ -0.25
CPSF1-201ENST00000526271 CYTH2Q99418 400 aa13.47□□□□□ -0.25
CPSF1-201ENST00000526271 TUBB6Q9BUF5 446 aa13.47□□□□□ -0.25
CPSF1-201ENST00000526271 EIF2B3Q9NR50 452 aaKnown RBP13.47□□□□□ -0.25
CPSF1-201ENST00000526271 ZNF148Q9UQR1 794 aa13.47□□□□□ -0.25
CPSF1-201ENST00000526271 HRH3Q9Y5N1 445 aa13.47□□□□□ -0.25
CPSF1-201ENST00000526271 AKAP6Q13023 2319 aa13.47□□□□□ -0.25
CPSF1-201ENST00000526271 E7EVH7 732 aa13.46□□□□□ -0.25
CPSF1-201ENST00000526271 F8W8V4 182 aa13.46□□□□□ -0.25
CPSF1-201ENST00000526271 H7BY64 318 aa13.46□□□□□ -0.25
CPSF1-201ENST00000526271 AVILO75366 819 aa13.46□□□□□ -0.25
CPSF1-201ENST00000526271 NEURL1O76050 574 aa13.46□□□□□ -0.25
CPSF1-201ENST00000526271 CRYABP02511 175 aaKnown RBP13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms