RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 BICRAQ9NZM4 1560 aa3.12□□□□□ -1.91
HMGN1P28-201ENST00000521340 GREB1LQ9C091 1923 aaPredicted RBP3.11□□□□□ -1.91
HMGN1P28-201ENST00000521340 SERINC4A6NH21 518 aa3.11□□□□□ -1.91
HMGN1P28-201ENST00000521340 MSGN1A6NI15 193 aa3.11□□□□□ -1.91
HMGN1P28-201ENST00000521340 NADKO95544 446 aaPredicted RBP3.11□□□□□ -1.91
HMGN1P28-201ENST00000521340 IGKV2-30P06310 120 aa3.11□□□□□ -1.91
HMGN1P28-201ENST00000521340 IGHV4-38-2P0DP08 117 aa3.11□□□□□ -1.91
HMGN1P28-201ENST00000521340 P4HA1P13674 534 aa3.11□□□□□ -1.91
HMGN1P28-201ENST00000521340 PAX1P15863 534 aa3.11□□□□□ -1.91
HMGN1P28-201ENST00000521340 GAP43P17677 238 aa3.11□□□□□ -1.91
HMGN1P28-201ENST00000521340 CTNNB1P35222 781 aa3.11□□□□□ -1.91
HMGN1P28-201ENST00000521340 NPBWR1P48145 328 aa3.11□□□□□ -1.91
HMGN1P28-201ENST00000521340 PDX1P52945 283 aa3.11□□□□□ -1.91
HMGN1P28-201ENST00000521340 OR1D5P58170 312 aa3.11□□□□□ -1.91
HMGN1P28-201ENST00000521340 IL10RBQ08334 325 aa3.11□□□□□ -1.91
HMGN1P28-201ENST00000521340 DMP1Q13316 513 aaPredicted RBP3.11□□□□□ -1.91
HMGN1P28-201ENST00000521340 STXBP2Q15833 593 aa3.11□□□□□ -1.91
HMGN1P28-201ENST00000521340 CCNYL2Q5T2Q4 361 aa3.11□□□□□ -1.91
HMGN1P28-201ENST00000521340 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.11□□□□□ -1.91
HMGN1P28-201ENST00000521340 NFE4Q86UQ8 179 aa3.11□□□□□ -1.91
HMGN1P28-201ENST00000521340 AMIGO1Q86WK6 493 aa3.11□□□□□ -1.91
HMGN1P28-201ENST00000521340 KLHDC1Q8N7A1 406 aa3.11□□□□□ -1.91
HMGN1P28-201ENST00000521340 SLC24A4Q8NFF2 622 aa3.11□□□□□ -1.91
HMGN1P28-201ENST00000521340 KIAA1524Q8TCG1 905 aa3.11□□□□□ -1.91
HMGN1P28-201ENST00000521340 RSPH1Q8WYR4 309 aa3.11□□□□□ -1.91
HMGN1P28-201ENST00000521340 PIK3R3Q92569 461 aa3.11□□□□□ -1.91
HMGN1P28-201ENST00000521340 CCDC47Q96A33 483 aaKnown RBP3.11□□□□□ -1.91
HMGN1P28-201ENST00000521340 TMEM186Q96B77 213 aa3.11□□□□□ -1.91
HMGN1P28-201ENST00000521340 ALG14Q96F25 216 aa3.11□□□□□ -1.91
HMGN1P28-201ENST00000521340 GAL3ST4Q96RP7 486 aa3.11□□□□□ -1.91
HMGN1P28-201ENST00000521340 TMEM204Q9BSN7 226 aa3.11□□□□□ -1.91
HMGN1P28-201ENST00000521340 THAP2Q9H0W7 228 aa3.11□□□□□ -1.91
HMGN1P28-201ENST00000521340 SDCBP2Q9H190 292 aa3.11□□□□□ -1.91
HMGN1P28-201ENST00000521340 C10orf88Q9H8K7 445 aa3.11□□□□□ -1.91
HMGN1P28-201ENST00000521340 TMEM161AQ9NX61 479 aa3.11□□□□□ -1.91
HMGN1P28-201ENST00000521340 PKD2L2Q9NZM6 624 aa3.11□□□□□ -1.91
HMGN1P28-201ENST00000521340 OR6C2Q9NZP2 312 aa3.11□□□□□ -1.91
HMGN1P28-201ENST00000521340 TRPC4Q9UBN4 977 aa3.11□□□□□ -1.91
HMGN1P28-201ENST00000521340 TRIM10Q9UDY6 481 aa3.11□□□□□ -1.91
HMGN1P28-201ENST00000521340 MAD2L2Q9UI95 211 aa3.11□□□□□ -1.91
HMGN1P28-201ENST00000521340 KCNK6Q9Y257 313 aa3.11□□□□□ -1.91
HMGN1P28-201ENST00000521340 FOXA2Q9Y261 457 aaPredicted RBP3.11□□□□□ -1.91
HMGN1P28-201ENST00000521340 RIPK3Q9Y572 518 aa3.11□□□□□ -1.91
HMGN1P28-201ENST00000521340 IL16Q14005 1332 aa3.11□□□□□ -1.91
HMGN1P28-201ENST00000521340 KIF21BO75037 1637 aa3.11□□□□□ -1.91
HMGN1P28-201ENST00000521340 ABCC8Q09428 1581 aa3.1□□□□□ -1.91
HMGN1P28-201ENST00000521340 TRAV18A0A075B6X5 111 aa3.1□□□□□ -1.91
HMGN1P28-201ENST00000521340 ANKRD61A6NGH8 418 aa3.1□□□□□ -1.91
HMGN1P28-201ENST00000521340 MYMKA6NI61 221 aa3.1□□□□□ -1.91
HMGN1P28-201ENST00000521340 H3BMM5 538 aa3.1□□□□□ -1.91
HMGN1P28-201ENST00000521340 GPIP06744 558 aa3.1□□□□□ -1.91
HMGN1P28-201ENST00000521340 ABHD2P08910 425 aa3.1□□□□□ -1.91
HMGN1P28-201ENST00000521340 SP9P0CG40 484 aa3.1□□□□□ -1.91
HMGN1P28-201ENST00000521340 SKILP12757 684 aa3.1□□□□□ -1.91
HMGN1P28-201ENST00000521340 CA6P23280 308 aa3.1□□□□□ -1.91
HMGN1P28-201ENST00000521340 SRD5A2P31213 254 aa3.1□□□□□ -1.91
HMGN1P28-201ENST00000521340 CDKN2AP42771 156 aaKnown RBP3.1□□□□□ -1.91
HMGN1P28-201ENST00000521340 ART1P52961 327 aa3.1□□□□□ -1.91
HMGN1P28-201ENST00000521340 CDH11P55287 796 aa3.1□□□□□ -1.91
HMGN1P28-201ENST00000521340 FKBP1BP68106 108 aa3.1□□□□□ -1.91
HMGN1P28-201ENST00000521340 ARF5P84085 180 aa3.1□□□□□ -1.91
HMGN1P28-201ENST00000521340 ZXDBP98169 803 aa3.1□□□□□ -1.91
HMGN1P28-201ENST00000521340 WASHC5Q12768 1159 aa3.1□□□□□ -1.91
HMGN1P28-201ENST00000521340 GK2Q14410 553 aaPredicted RBP3.1□□□□□ -1.91
HMGN1P28-201ENST00000521340 PHKG1Q16816 387 aa3.1□□□□□ -1.91
HMGN1P28-201ENST00000521340 PDLIM3Q53GG5 364 aaPredicted RBP3.1□□□□□ -1.91
HMGN1P28-201ENST00000521340 WDR38Q5JTN6 314 aa3.1□□□□□ -1.91
HMGN1P28-201ENST00000521340 SLC35D3Q5M8T2 416 aa3.1□□□□□ -1.91
HMGN1P28-201ENST00000521340 PRUNE1Q86TP1 453 aa3.1□□□□□ -1.91
HMGN1P28-201ENST00000521340 PIGZQ86VD9 579 aa3.1□□□□□ -1.91
HMGN1P28-201ENST00000521340 CCDC60Q8IWA6 550 aaPredicted RBP3.1□□□□□ -1.91
HMGN1P28-201ENST00000521340 ZC3H3Q8IXZ2 948 aaKnown RBP3.1□□□□□ -1.91
HMGN1P28-201ENST00000521340 RCOR2Q8IZ40 523 aa3.1□□□□□ -1.91
HMGN1P28-201ENST00000521340 ELMOD2Q8IZ81 293 aa3.1□□□□□ -1.91
HMGN1P28-201ENST00000521340 RYBPQ8N488 228 aaPredicted RBP3.1□□□□□ -1.91
HMGN1P28-201ENST00000521340 LRTM2Q8N967 370 aa3.1□□□□□ -1.91
HMGN1P28-201ENST00000521340 KCNH5Q8NCM2 988 aa3.1□□□□□ -1.91
HMGN1P28-201ENST00000521340 URGCPQ8TCY9 931 aa3.1□□□□□ -1.91
HMGN1P28-201ENST00000521340 NUDCD2Q8WVJ2 157 aa3.1□□□□□ -1.91
HMGN1P28-201ENST00000521340 PGM2Q96G03 612 aa3.1□□□□□ -1.91
HMGN1P28-201ENST00000521340 CDKN2AIPNLQ96HQ2 116 aa3.1□□□□□ -1.91
HMGN1P28-201ENST00000521340 ST6GAL2Q96JF0 529 aa3.1□□□□□ -1.91
HMGN1P28-201ENST00000521340 CDCA3Q99618 268 aaPredicted RBP3.1□□□□□ -1.91
HMGN1P28-201ENST00000521340 C17orf62Q9BQA9 187 aa3.1□□□□□ -1.91
HMGN1P28-201ENST00000521340 ZPBPQ9BS86 351 aa3.1□□□□□ -1.91
HMGN1P28-201ENST00000521340 TRMT61BQ9BVS5 477 aaKnown RBP3.1□□□□□ -1.91
HMGN1P28-201ENST00000521340 PRRG4Q9BZD6 226 aa3.1□□□□□ -1.91
HMGN1P28-201ENST00000521340 SLC39A8Q9C0K1 460 aa3.1□□□□□ -1.91
HMGN1P28-201ENST00000521340 RIMS4Q9H426 269 aaPredicted RBP3.1□□□□□ -1.91
HMGN1P28-201ENST00000521340 PIN4Q9Y237 131 aaKnown RBP3.1□□□□□ -1.91
HMGN1P28-201ENST00000521340 BIVM-ERCC5R4GMW8 1640 aa3.1□□□□□ -1.91
HMGN1P28-201ENST00000521340 MYH14Q7Z406 1995 aaKnown RBP3.1□□□□□ -1.91
HMGN1P28-201ENST00000521340 C2orf92A0A1B0GVN3 265 aa3.09□□□□□ -1.91
HMGN1P28-201ENST00000521340 TMEM129A0AVI4 362 aa3.09□□□□□ -1.91
HMGN1P28-201ENST00000521340 MAGEB16A2A368 324 aa3.09□□□□□ -1.91
HMGN1P28-201ENST00000521340 TLR4O00206 839 aa3.09□□□□□ -1.91
HMGN1P28-201ENST00000521340 MLNRO43193 412 aa3.09□□□□□ -1.91
HMGN1P28-201ENST00000521340 PRPSAP2O60256 369 aa3.09□□□□□ -1.91
HMGN1P28-201ENST00000521340 DFFBO76075 338 aa3.09□□□□□ -1.91
HMGN1P28-201ENST00000521340 ALPPP05187 535 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms