RNA–Protein interactions for RNA: ENST00000518930.1

PCM1-209, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-209ENST00000518930 TCTE1Q5JU00 501 aa23.22■■□□□ 1.31
PCM1-209ENST00000518930 LIPMQ5VYY2 423 aa23.22■■□□□ 1.31
PCM1-209ENST00000518930 KRT78Q8N1N4 520 aa23.22■■□□□ 1.31
PCM1-209ENST00000518930 ZNF483Q8TF39 744 aaPredicted RBP23.22■■□□□ 1.31
PCM1-209ENST00000518930 PTCD3Q96EY7 689 aaKnown RBP23.22■■□□□ 1.31
PCM1-209ENST00000518930 SLC46A1Q96NT5 459 aa23.22■■□□□ 1.31
PCM1-209ENST00000518930 FCRL4Q96PJ5 515 aa23.22■■□□□ 1.31
PCM1-209ENST00000518930 EFCAB11Q9BUY7 163 aa23.22■■□□□ 1.31
PCM1-209ENST00000518930 IPPKQ9H8X2 491 aa23.22■■□□□ 1.31
PCM1-209ENST00000518930 OXSMQ9NWU1 459 aa23.22■■□□□ 1.31
PCM1-209ENST00000518930 PCDHGA3Q9Y5H0 932 aa23.22■■□□□ 1.31
PCM1-209ENST00000518930 TRBC2A0A5B9 178 aa23.21■■□□□ 1.31
PCM1-209ENST00000518930 FEZF1A0PJY2 475 aa23.21■■□□□ 1.31
PCM1-209ENST00000518930 HCRTR1O43613 425 aa23.21■■□□□ 1.31
PCM1-209ENST00000518930 BRINP1O60477 761 aa23.21■■□□□ 1.31
PCM1-209ENST00000518930 SRPX2O60687 465 aaPredicted RBP23.21■■□□□ 1.31
PCM1-209ENST00000518930 EPORP19235 508 aa23.21■■□□□ 1.31
PCM1-209ENST00000518930 VARSP26640 1264 aaKnown RBP23.21■■□□□ 1.31
PCM1-209ENST00000518930 CCNG1P51959 295 aa23.21■■□□□ 1.31
PCM1-209ENST00000518930 VSX2P58304 361 aaPredicted RBP23.21■■□□□ 1.31
PCM1-209ENST00000518930 DNAJB13P59910 316 aa23.21■■□□□ 1.31
PCM1-209ENST00000518930 LAPTM5Q13571 262 aa23.21■■□□□ 1.31
PCM1-209ENST00000518930 LARP7Q4G0J3 582 aaKnown RBP eCLIP23.21■■□□□ 1.31
PCM1-209ENST00000518930 CFAP157Q5JU67 520 aa23.21■■□□□ 1.31
PCM1-209ENST00000518930 FRMPD2BQ6IN97 320 aa23.21■■□□□ 1.31
PCM1-209ENST00000518930 FBXO42Q6P3S6 717 aa23.21■■□□□ 1.31
PCM1-209ENST00000518930 MYLK4Q86YV6 388 aaPredicted RBP23.21■■□□□ 1.31
PCM1-209ENST00000518930 TMEM126BQ8IUX1 230 aa23.21■■□□□ 1.31
PCM1-209ENST00000518930 CCNYL1Q8N7R7 359 aa23.21■■□□□ 1.31
PCM1-209ENST00000518930 OR1L3Q8NH93 324 aa23.21■■□□□ 1.31
PCM1-209ENST00000518930 THAP11Q96EK4 314 aa23.21■■□□□ 1.31
PCM1-209ENST00000518930 NSUN5Q96P11 429 aaKnown RBP23.21■■□□□ 1.31
PCM1-209ENST00000518930 B3GNT4Q9C0J1 378 aa23.21■■□□□ 1.31
PCM1-209ENST00000518930 NOL11Q9H8H0 719 aaKnown RBP23.21■■□□□ 1.31
PCM1-209ENST00000518930 ACTR8Q9H981 624 aa23.21■■□□□ 1.31
PCM1-209ENST00000518930 SEMA4BQ9NPR2 832 aaPredicted RBP23.21■■□□□ 1.31
PCM1-209ENST00000518930 THSD1Q9NS62 852 aa23.21■■□□□ 1.31
PCM1-209ENST00000518930 B3GALT1Q9Y5Z6 326 aa23.21■■□□□ 1.31
PCM1-209ENST00000518930 MDC1Q14676 2089 aaKnown RBP23.2■■□□□ 1.3
PCM1-209ENST00000518930 TMEM120BA0PK00 339 aa23.2■■□□□ 1.3
PCM1-209ENST00000518930 HMGB1P1B2RPK0 211 aaPredicted RBP23.2■■□□□ 1.3
PCM1-209ENST00000518930 OR1F1O43749 312 aa23.2■■□□□ 1.3
PCM1-209ENST00000518930 DXOO77932 396 aaKnown RBP23.2■■□□□ 1.3
PCM1-209ENST00000518930 NAA20P61599 178 aa23.2■■□□□ 1.3
PCM1-209ENST00000518930 DOC2AQ14183 400 aa23.2■■□□□ 1.3
PCM1-209ENST00000518930 TBCCQ15814 346 aa23.2■■□□□ 1.3
PCM1-209ENST00000518930 HIST2H2ACQ16777 129 aaPredicted RBP23.2■■□□□ 1.3
PCM1-209ENST00000518930 UNC50Q53HI1 259 aa23.2■■□□□ 1.3
PCM1-209ENST00000518930 TTMPQ5BVD1 217 aa23.2■■□□□ 1.3
PCM1-209ENST00000518930 HIST2H2AA3Q6FI13 130 aa23.2■■□□□ 1.3
PCM1-209ENST00000518930 C10orf107Q8IVU9 208 aa23.2■■□□□ 1.3
PCM1-209ENST00000518930 ANKRD42Q8N9B4 389 aa23.2■■□□□ 1.3
PCM1-209ENST00000518930 PMEPA1Q969W9 287 aa23.2■■□□□ 1.3
PCM1-209ENST00000518930 WDR34Q96EX3 536 aa23.2■■□□□ 1.3
PCM1-209ENST00000518930 NLNQ9BYT8 704 aa23.2■■□□□ 1.3
PCM1-209ENST00000518930 SLC7A5P2Q9GIP4 190 aa23.2■■□□□ 1.3
PCM1-209ENST00000518930 PITHD1Q9GZP4 211 aaPredicted RBP23.2■■□□□ 1.3
PCM1-209ENST00000518930 GEMIN8Q9NWZ8 242 aaKnown RBP23.2■■□□□ 1.3
PCM1-209ENST00000518930 STK38LQ9Y2H1 464 aa23.2■■□□□ 1.3
PCM1-209ENST00000518930 PCDHGA7Q9Y5G6 932 aa23.2■■□□□ 1.3
PCM1-209ENST00000518930 C9orf172C9J069 976 aa23.19■■□□□ 1.3
PCM1-209ENST00000518930 H0YGG7 62 aa23.19■■□□□ 1.3
PCM1-209ENST00000518930 NVLO15381 856 aaKnown RBP23.19■■□□□ 1.3
PCM1-209ENST00000518930 ZSCAN9O15535 394 aaPredicted RBP23.19■■□□□ 1.3
PCM1-209ENST00000518930 SCRG1O75711 98 aa23.19■■□□□ 1.3
PCM1-209ENST00000518930 OTCP00480 354 aa23.19■■□□□ 1.3
PCM1-209ENST00000518930 EIF2S1P05198 315 aaKnown RBP23.19■■□□□ 1.3
PCM1-209ENST00000518930 BCL6P41182 706 aa23.19■■□□□ 1.3
PCM1-209ENST00000518930 ETV4P43268 484 aa23.19■■□□□ 1.3
PCM1-209ENST00000518930 ARF3P61204 181 aaPredicted RBP23.19■■□□□ 1.3
PCM1-209ENST00000518930 CLCQ05315 142 aa23.19■■□□□ 1.3
PCM1-209ENST00000518930 PCDH1Q08174 1060 aa23.19■■□□□ 1.3
PCM1-209ENST00000518930 RBBP5Q15291 538 aaKnown RBP23.19■■□□□ 1.3
PCM1-209ENST00000518930 TLDC1Q6P9B6 456 aa23.19■■□□□ 1.3
PCM1-209ENST00000518930 RPS27LQ71UM5 84 aaKnown RBP23.19■■□□□ 1.3
PCM1-209ENST00000518930 ZNF655Q8N720 491 aaPredicted RBP23.19■■□□□ 1.3
PCM1-209ENST00000518930 TTC29Q8NA56 475 aaPredicted RBP23.19■■□□□ 1.3
PCM1-209ENST00000518930 MFSD9Q8NBP5 474 aa23.19■■□□□ 1.3
PCM1-209ENST00000518930 UBE2E3Q969T4 207 aa23.19■■□□□ 1.3
PCM1-209ENST00000518930 OR2A5Q96R48 311 aa23.19■■□□□ 1.3
PCM1-209ENST00000518930 SARGQ9BW04 601 aa23.19■■□□□ 1.3
PCM1-209ENST00000518930 ULBP3Q9BZM4 244 aa23.19■■□□□ 1.3
PCM1-209ENST00000518930 DRC3Q9H069 523 aa23.19■■□□□ 1.3
PCM1-209ENST00000518930 SPNS1Q9H2V7 528 aa23.19■■□□□ 1.3
PCM1-209ENST00000518930 PRM3Q9NNZ6 103 aa23.19■■□□□ 1.3
PCM1-209ENST00000518930 ASCL3Q9NQ33 180 aa23.19■■□□□ 1.3
PCM1-209ENST00000518930 NKIRAS1Q9NYS0 192 aa23.19■■□□□ 1.3
PCM1-209ENST00000518930 PCDHGA4Q9Y5G9 962 aa23.19■■□□□ 1.3
PCM1-209ENST00000518930 KCNE1BA0A087WTH5 132 aa23.18■■□□□ 1.3
PCM1-209ENST00000518930 LOC105369274A0A096LPK9 316 aa23.18■■□□□ 1.3
PCM1-209ENST00000518930 LOC102723532A0A0G2JNH3 316 aa23.18■■□□□ 1.3
PCM1-209ENST00000518930 DYNC1I1O14576 645 aa23.18■■□□□ 1.3
PCM1-209ENST00000518930 UGDHO60701 494 aa23.18■■□□□ 1.3
PCM1-209ENST00000518930 TRIM13O60858 407 aa23.18■■□□□ 1.3
PCM1-209ENST00000518930 MLYCDO95822 493 aa23.18■■□□□ 1.3
PCM1-209ENST00000518930 ALDH3A1P30838 453 aa23.18■■□□□ 1.3
PCM1-209ENST00000518930 SLC5A2P31639 672 aa23.18■■□□□ 1.3
PCM1-209ENST00000518930 HNF4AP41235 474 aa23.18■■□□□ 1.3
PCM1-209ENST00000518930 CASP2P42575 452 aa23.18■■□□□ 1.3
PCM1-209ENST00000518930 NAGLUP54802 743 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms