RNA–Protein interactions for RNA: ENST00000518877.1

PCM1-208, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-208ENST00000518877 DPP3Q9NY33 737 aa1.99□□□□□ -2.09
PCM1-208ENST00000518877 C19orf25Q9UFG5 118 aaPredicted RBP1.99□□□□□ -2.09
PCM1-208ENST00000518877 CHORDC1Q9UHD1 332 aaPredicted RBP1.99□□□□□ -2.09
PCM1-208ENST00000518877 RPS6KA6Q9UK32 745 aa1.99□□□□□ -2.09
PCM1-208ENST00000518877 RPS6KL1Q9Y6S9 549 aa1.99□□□□□ -2.09
PCM1-208ENST00000518877 R4GN57 208 aa1.99□□□□□ -2.09
PCM1-208ENST00000518877 MYH14Q7Z406 1995 aaKnown RBP1.99□□□□□ -2.09
PCM1-208ENST00000518877 ARID2Q68CP9 1835 aa1.98□□□□□ -2.09
PCM1-208ENST00000518877 GON4LQ3T8J9 2241 aa1.98□□□□□ -2.09
PCM1-208ENST00000518877 UMODL1Q5DID0 1318 aa1.98□□□□□ -2.09
PCM1-208ENST00000518877 SRRM4A7MD48 611 aaKnown RBP1.98□□□□□ -2.09
PCM1-208ENST00000518877 NPIPB9F8W1W9 429 aa1.98□□□□□ -2.09
PCM1-208ENST00000518877 HAT1O14929 419 aa1.98□□□□□ -2.09
PCM1-208ENST00000518877 PHF1O43189 567 aaPredicted RBP1.98□□□□□ -2.09
PCM1-208ENST00000518877 SH3BP5O60239 455 aa1.98□□□□□ -2.09
PCM1-208ENST00000518877 ECE2O60344 883 aa1.98□□□□□ -2.09
PCM1-208ENST00000518877 TADA2AO75478 443 aa1.98□□□□□ -2.09
PCM1-208ENST00000518877 ATP1B1P05026 303 aa1.98□□□□□ -2.09
PCM1-208ENST00000518877 SAT1P21673 171 aa1.98□□□□□ -2.09
PCM1-208ENST00000518877 MC5RP33032 325 aa1.98□□□□□ -2.09
PCM1-208ENST00000518877 CSTF2P33240 577 aaKnown RBP eCLIP1.98□□□□□ -2.09
PCM1-208ENST00000518877 PRELPP51888 382 aa1.98□□□□□ -2.09
PCM1-208ENST00000518877 CLDN15P56746 228 aa1.98□□□□□ -2.09
PCM1-208ENST00000518877 IRX4P78413 519 aa1.98□□□□□ -2.09
PCM1-208ENST00000518877 IFI35P80217 286 aaPredicted RBP1.98□□□□□ -2.09
PCM1-208ENST00000518877 HSPB3Q12988 150 aa1.98□□□□□ -2.09
PCM1-208ENST00000518877 CDH18Q13634 790 aa1.98□□□□□ -2.09
PCM1-208ENST00000518877 ITGA7Q13683 1181 aa1.98□□□□□ -2.09
PCM1-208ENST00000518877 TMEM132DQ14C87 1099 aa1.98□□□□□ -2.09
PCM1-208ENST00000518877 TAB1Q15750 504 aa1.98□□□□□ -2.09
PCM1-208ENST00000518877 C15orf59Q2T9L4 293 aaPredicted RBP1.98□□□□□ -2.09
PCM1-208ENST00000518877 MCMDC2Q4G0Z9 681 aa1.98□□□□□ -2.09
PCM1-208ENST00000518877 SLC35D3Q5M8T2 416 aa1.98□□□□□ -2.09
PCM1-208ENST00000518877 FAM182AQ5T1J6 154 aa1.98□□□□□ -2.09
PCM1-208ENST00000518877 SPATA1Q5VX52 437 aa1.98□□□□□ -2.09
PCM1-208ENST00000518877 OR4C11Q6IEV9 310 aa1.98□□□□□ -2.09
PCM1-208ENST00000518877 C11orf63Q6NUN7 778 aa1.98□□□□□ -2.09
PCM1-208ENST00000518877 MZT2BQ6NZ67 158 aa1.98□□□□□ -2.09
PCM1-208ENST00000518877 LGI2Q8N0V4 545 aa1.98□□□□□ -2.09
PCM1-208ENST00000518877 MCUQ8NE86 351 aa1.98□□□□□ -2.09
PCM1-208ENST00000518877 SECISBP2LQ93073 1101 aaKnown RBP1.98□□□□□ -2.09
PCM1-208ENST00000518877 ZNF597Q96LX8 424 aa1.98□□□□□ -2.09
PCM1-208ENST00000518877 MUS81Q96NY9 551 aa1.98□□□□□ -2.09
PCM1-208ENST00000518877 MGME1Q9BQP7 344 aa1.98□□□□□ -2.09
PCM1-208ENST00000518877 CHCHD5Q9BSY4 110 aa1.98□□□□□ -2.09
PCM1-208ENST00000518877 CENPOQ9BU64 300 aa1.98□□□□□ -2.09
PCM1-208ENST00000518877 TRPV4Q9HBA0 871 aa1.98□□□□□ -2.09
PCM1-208ENST00000518877 DNAJC4Q9NNZ3 241 aa1.98□□□□□ -2.09
PCM1-208ENST00000518877 PA2G4Q9UQ80 394 aaKnown RBP1.98□□□□□ -2.09
PCM1-208ENST00000518877 SLC6A5Q9Y345 797 aa1.98□□□□□ -2.09
PCM1-208ENST00000518877 TRPV2Q9Y5S1 764 aa1.98□□□□□ -2.09
PCM1-208ENST00000518877 SNX8Q9Y5X2 465 aa1.98□□□□□ -2.09
PCM1-208ENST00000518877 TDRD6O60522 2096 aaKnown RBP1.98□□□□□ -2.09
PCM1-208ENST00000518877 LOC100509620A0A075B734 347 aa1.97□□□□□ -2.09
PCM1-208ENST00000518877 TRBV4-1A0A0J9YWV2 114 aa1.97□□□□□ -2.09
PCM1-208ENST00000518877 hCG_1809904A0A1W2PP81 198 aa1.97□□□□□ -2.09
PCM1-208ENST00000518877 A0A1W2PPE2 198 aa1.97□□□□□ -2.09
PCM1-208ENST00000518877 A0A1W2PR64 198 aa1.97□□□□□ -2.09
PCM1-208ENST00000518877 MTMR11A4FU01 709 aa1.97□□□□□ -2.09
PCM1-208ENST00000518877 CASTOR2A6NHX0 329 aa1.97□□□□□ -2.09
PCM1-208ENST00000518877 ZNF354AO60765 605 aaPredicted RBP1.97□□□□□ -2.09
PCM1-208ENST00000518877 CELF2O95319 508 aaKnown RBP1.97□□□□□ -2.09
PCM1-208ENST00000518877 CSN3P07498 182 aa1.97□□□□□ -2.09
PCM1-208ENST00000518877 ADRB2P07550 413 aa1.97□□□□□ -2.09
PCM1-208ENST00000518877 LINGO3P0C6S8 592 aa1.97□□□□□ -2.09
PCM1-208ENST00000518877 PRKAR1AP10644 381 aa1.97□□□□□ -2.09
PCM1-208ENST00000518877 MGMTP16455 207 aa1.97□□□□□ -2.09
PCM1-208ENST00000518877 RPL35AP18077 110 aaKnown RBP1.97□□□□□ -2.09
PCM1-208ENST00000518877 LHX1P48742 406 aa1.97□□□□□ -2.09
PCM1-208ENST00000518877 DNA2P51530 1060 aa1.97□□□□□ -2.09
PCM1-208ENST00000518877 VAMP7P51809 220 aa1.97□□□□□ -2.09
PCM1-208ENST00000518877 HNRNPA3P51991 378 aaKnown RBP1.97□□□□□ -2.09
PCM1-208ENST00000518877 UBASH3AP57075 661 aa1.97□□□□□ -2.09
PCM1-208ENST00000518877 POLR2LP62875 67 aaKnown RBP1.97□□□□□ -2.09
PCM1-208ENST00000518877 RASGEF1BQ0VAM2 473 aa1.97□□□□□ -2.09
PCM1-208ENST00000518877 PRKG2Q13237 762 aa1.97□□□□□ -2.09
PCM1-208ENST00000518877 TRA2AQ13595 282 aaKnown RBP eCLIP1.97□□□□□ -2.09
PCM1-208ENST00000518877 BECN1Q14457 450 aa1.97□□□□□ -2.09
PCM1-208ENST00000518877 FAM189A2Q15884 450 aa1.97□□□□□ -2.09
PCM1-208ENST00000518877 LETM2Q2VYF4 491 aa1.97□□□□□ -2.09
PCM1-208ENST00000518877 MS4A18Q3C1V0 323 aa1.97□□□□□ -2.09
PCM1-208ENST00000518877 SPECC1Q5M775 1068 aa1.97□□□□□ -2.09
PCM1-208ENST00000518877 GARNL3Q5VVW2 1013 aa1.97□□□□□ -2.09
PCM1-208ENST00000518877 RSBN1Q5VWQ0 802 aaPredicted RBP1.97□□□□□ -2.09
PCM1-208ENST00000518877 LCLAT1Q6UWP7 414 aa1.97□□□□□ -2.09
PCM1-208ENST00000518877 BAIAP2L2Q6UXY1 529 aa1.97□□□□□ -2.09
PCM1-208ENST00000518877 ENOSF1Q7L5Y1 443 aa1.97□□□□□ -2.09
PCM1-208ENST00000518877 ZER1Q7Z7L7 766 aa1.97□□□□□ -2.09
PCM1-208ENST00000518877 CD177Q8N6Q3 437 aa1.97□□□□□ -2.09
PCM1-208ENST00000518877 LRTM2Q8N967 370 aa1.97□□□□□ -2.09
PCM1-208ENST00000518877 TC2NQ8N9U0 490 aa1.97□□□□□ -2.09
PCM1-208ENST00000518877 TDRD5Q8NAT2 981 aaKnown RBP1.97□□□□□ -2.09
PCM1-208ENST00000518877 SLC4A11Q8NBS3 891 aa1.97□□□□□ -2.09
PCM1-208ENST00000518877 OR4K1Q8NGD4 311 aa1.97□□□□□ -2.09
PCM1-208ENST00000518877 OR5T2Q8NGG2 359 aa1.97□□□□□ -2.09
PCM1-208ENST00000518877 C9orf43Q8TAL5 461 aaPredicted RBP1.97□□□□□ -2.09
PCM1-208ENST00000518877 JAKMIP2Q96AA8 810 aa1.97□□□□□ -2.09
PCM1-208ENST00000518877 OTUB1Q96FW1 271 aaPredicted RBP1.97□□□□□ -2.09
PCM1-208ENST00000518877 LPAR4Q99677 370 aa1.97□□□□□ -2.09
PCM1-208ENST00000518877 CPNE1Q99829 537 aa1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms