RNA–Protein interactions for RNA: ENST00000516842.1

RNU6-557P-201, Transcript of RNA, U6 small nuclear 557, pseudogene, humanhuman

BASIC

Gene RNU6-557P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-557P-201ENST00000516842 SLC35E2P0CK97 266 aa-0.68□□□□□ -2.52
RNU6-557P-201ENST00000516842 PTGER4P35408 488 aa-0.68□□□□□ -2.52
RNU6-557P-201ENST00000516842 SLC15A1P46059 708 aa-0.68□□□□□ -2.52
RNU6-557P-201ENST00000516842 BRCC3P46736 316 aa-0.68□□□□□ -2.52
RNU6-557P-201ENST00000516842 DNA2P51530 1060 aa-0.68□□□□□ -2.52
RNU6-557P-201ENST00000516842 P2RY4P51582 365 aa-0.68□□□□□ -2.52
RNU6-557P-201ENST00000516842 RIPPLY3P57055 190 aa-0.68□□□□□ -2.52
RNU6-557P-201ENST00000516842 HERVK_113P61574 105 aa-0.68□□□□□ -2.52
RNU6-557P-201ENST00000516842 CDK3Q00526 305 aa-0.68□□□□□ -2.52
RNU6-557P-201ENST00000516842 OVGP1Q12889 678 aa-0.68□□□□□ -2.52
RNU6-557P-201ENST00000516842 EFR3AQ14156 821 aa-0.68□□□□□ -2.52
RNU6-557P-201ENST00000516842 MLF2Q15773 248 aaPredicted RBP-0.68□□□□□ -2.52
RNU6-557P-201ENST00000516842 PCK2Q16822 640 aa-0.68□□□□□ -2.52
RNU6-557P-201ENST00000516842 KNOP1Q1ED39 458 aaKnown RBP-0.68□□□□□ -2.52
RNU6-557P-201ENST00000516842 ZNF630Q2M218 657 aaPredicted RBP-0.68□□□□□ -2.52
RNU6-557P-201ENST00000516842 ABCA11PQ4W5N1 156 aa-0.68□□□□□ -2.52
RNU6-557P-201ENST00000516842 PAN3Q58A45 887 aaKnown RBP-0.68□□□□□ -2.52
RNU6-557P-201ENST00000516842 CXorf66Q5JRM2 361 aaPredicted RBP-0.68□□□□□ -2.52
RNU6-557P-201ENST00000516842 RAET1LQ5VY80 246 aa-0.68□□□□□ -2.52
RNU6-557P-201ENST00000516842 DET1Q7L5Y6 550 aa-0.68□□□□□ -2.52
RNU6-557P-201ENST00000516842 LINC01551Q86U37 167 aa-0.68□□□□□ -2.52
RNU6-557P-201ENST00000516842 APOBEC3FQ8IUX4 373 aaKnown RBP-0.68□□□□□ -2.52
RNU6-557P-201ENST00000516842 SPICE1Q8N0Z3 855 aa-0.68□□□□□ -2.52
RNU6-557P-201ENST00000516842 SLC22A18ASQ8N1D0 253 aa-0.68□□□□□ -2.52
RNU6-557P-201ENST00000516842 DCAF4L2Q8NA75 395 aa-0.68□□□□□ -2.52
RNU6-557P-201ENST00000516842 THAP8Q8NA92 274 aa-0.68□□□□□ -2.52
RNU6-557P-201ENST00000516842 SH3KBP1Q96B97 665 aa-0.68□□□□□ -2.52
RNU6-557P-201ENST00000516842 EID2BQ96D98 161 aa-0.68□□□□□ -2.52
RNU6-557P-201ENST00000516842 LINC00477Q96M19 166 aa-0.68□□□□□ -2.52
RNU6-557P-201ENST00000516842 HARBI1Q96MB7 349 aa-0.68□□□□□ -2.52
RNU6-557P-201ENST00000516842 DRC1Q96MC2 740 aa-0.68□□□□□ -2.52
RNU6-557P-201ENST00000516842 FOPNLQ96NB1 174 aa-0.68□□□□□ -2.52
RNU6-557P-201ENST00000516842 GUCD1Q96NT3 240 aa-0.68□□□□□ -2.52
RNU6-557P-201ENST00000516842 CD180Q99467 661 aa-0.68□□□□□ -2.52
RNU6-557P-201ENST00000516842 STACQ99469 402 aa-0.68□□□□□ -2.52
RNU6-557P-201ENST00000516842 H2AFJQ9BTM1 129 aa-0.68□□□□□ -2.52
RNU6-557P-201ENST00000516842 TNKS1BP1Q9C0C2 1729 aaKnown RBP-0.68□□□□□ -2.52
RNU6-557P-201ENST00000516842 DNAI2Q9GZS0 605 aa-0.68□□□□□ -2.52
RNU6-557P-201ENST00000516842 TNMDQ9H2S6 317 aa-0.68□□□□□ -2.52
RNU6-557P-201ENST00000516842 MAGIXQ9H6Y5 334 aa-0.68□□□□□ -2.52
RNU6-557P-201ENST00000516842 WDR41Q9HAD4 459 aa-0.68□□□□□ -2.52
RNU6-557P-201ENST00000516842 SAMSN1Q9NSI8 373 aaKnown RBP-0.68□□□□□ -2.52
RNU6-557P-201ENST00000516842 C19orf25Q9UFG5 118 aaPredicted RBP-0.68□□□□□ -2.52
RNU6-557P-201ENST00000516842 ZNF221Q9UK13 617 aa-0.68□□□□□ -2.52
RNU6-557P-201ENST00000516842 GJD2Q9UKL4 321 aa-0.68□□□□□ -2.52
RNU6-557P-201ENST00000516842 ZHX1Q9UKY1 873 aaPredicted RBP-0.68□□□□□ -2.52
RNU6-557P-201ENST00000516842 SPATA2Q9UM82 520 aa-0.68□□□□□ -2.52
RNU6-557P-201ENST00000516842 R4GN57 208 aa-0.68□□□□□ -2.52
RNU6-557P-201ENST00000516842 IGLV2-33A0A075B6J2 118 aaPredicted RBP-0.69□□□□□ -2.52
RNU6-557P-201ENST00000516842 A0A1B0GW55 424 aa-0.69□□□□□ -2.52
RNU6-557P-201ENST00000516842 HYKKA2RU49 373 aa-0.69□□□□□ -2.52
RNU6-557P-201ENST00000516842 FAM166BA8MTA8 275 aa-0.69□□□□□ -2.52
RNU6-557P-201ENST00000516842 VSTM5A8MXK1 200 aa-0.69□□□□□ -2.52
RNU6-557P-201ENST00000516842 PMM2O15305 246 aa-0.69□□□□□ -2.52
RNU6-557P-201ENST00000516842 JRKO75564 520 aa-0.69□□□□□ -2.52
RNU6-557P-201ENST00000516842 NKX2-2O95096 273 aa-0.69□□□□□ -2.52
RNU6-557P-201ENST00000516842 RPLP0P05388 317 aaKnown RBP-0.69□□□□□ -2.52
RNU6-557P-201ENST00000516842 SP9P0CG40 484 aa-0.69□□□□□ -2.52
RNU6-557P-201ENST00000516842 DUX4L2P0CJ85 424 aa-0.69□□□□□ -2.52
RNU6-557P-201ENST00000516842 DUX4L3P0CJ86 424 aa-0.69□□□□□ -2.52
RNU6-557P-201ENST00000516842 DUX4L5P0CJ88 424 aa-0.69□□□□□ -2.52
RNU6-557P-201ENST00000516842 DUX4L6P0CJ89 424 aa-0.69□□□□□ -2.52
RNU6-557P-201ENST00000516842 DUX4L7P0CJ90 424 aa-0.69□□□□□ -2.52
RNU6-557P-201ENST00000516842 RNH1P13489 461 aaKnown RBP-0.69□□□□□ -2.52
RNU6-557P-201ENST00000516842 VEGFAP15692 232 aaPredicted RBP-0.69□□□□□ -2.52
RNU6-557P-201ENST00000516842 IGFBP3P17936 291 aaPredicted RBP-0.69□□□□□ -2.52
RNU6-557P-201ENST00000516842 PSMB1P20618 241 aaKnown RBP-0.69□□□□□ -2.52
RNU6-557P-201ENST00000516842 ELAVL4P26378 380 aaKnown RBP-0.69□□□□□ -2.52
RNU6-557P-201ENST00000516842 CDAP32320 146 aa-0.69□□□□□ -2.52
RNU6-557P-201ENST00000516842 ACVR1BP36896 505 aa-0.69□□□□□ -2.52
RNU6-557P-201ENST00000516842 MAGEA9P43362 315 aa-0.69□□□□□ -2.52
RNU6-557P-201ENST00000516842 DIO3P55073 304 aa-0.69□□□□□ -2.52
RNU6-557P-201ENST00000516842 DAZ2Q13117 558 aaKnown RBP-0.69□□□□□ -2.52
RNU6-557P-201ENST00000516842 DCTN2Q13561 401 aaKnown RBP-0.69□□□□□ -2.52
RNU6-557P-201ENST00000516842 CUL4BQ13620 913 aa-0.69□□□□□ -2.52
RNU6-557P-201ENST00000516842 POM121L1PQ3SYA9 428 aa-0.69□□□□□ -2.52
RNU6-557P-201ENST00000516842 LRIF1Q5T3J3 769 aa-0.69□□□□□ -2.52
RNU6-557P-201ENST00000516842 TSPO2Q5TGU0 170 aa-0.69□□□□□ -2.52
RNU6-557P-201ENST00000516842 CXorf57Q6NSI4 855 aaKnown RBP-0.69□□□□□ -2.52
RNU6-557P-201ENST00000516842 DUX4L9Q6RFH8 374 aaPredicted RBP-0.69□□□□□ -2.52
RNU6-557P-201ENST00000516842 CROCCP3Q8IVE0 287 aa-0.69□□□□□ -2.52
RNU6-557P-201ENST00000516842 CFAP206Q8IYR0 622 aa-0.69□□□□□ -2.52
RNU6-557P-201ENST00000516842 ARRDC1Q8N5I2 433 aa-0.69□□□□□ -2.52
RNU6-557P-201ENST00000516842 OR13F1Q8NGS4 319 aa-0.69□□□□□ -2.52
RNU6-557P-201ENST00000516842 OR2L8Q8NGY9 312 aa-0.69□□□□□ -2.52
RNU6-557P-201ENST00000516842 RPLP0P6Q8NHW5 317 aa-0.69□□□□□ -2.52
RNU6-557P-201ENST00000516842 AFG1LQ8WV93 481 aa-0.69□□□□□ -2.52
RNU6-557P-201ENST00000516842 RDH5Q92781 318 aa-0.69□□□□□ -2.52
RNU6-557P-201ENST00000516842 MARC2Q969Z3 335 aa-0.69□□□□□ -2.52
RNU6-557P-201ENST00000516842 JAKMIP2Q96AA8 810 aa-0.69□□□□□ -2.52
RNU6-557P-201ENST00000516842 ELP4Q96EB1 424 aa-0.69□□□□□ -2.52
RNU6-557P-201ENST00000516842 C4orf45Q96LM5 186 aa-0.69□□□□□ -2.52
RNU6-557P-201ENST00000516842 FAM81BQ96LP2 452 aa-0.69□□□□□ -2.52
RNU6-557P-201ENST00000516842 DAZ3Q9NR90 486 aaKnown RBP-0.69□□□□□ -2.52
RNU6-557P-201ENST00000516842 CHST12Q9NRB3 414 aa-0.69□□□□□ -2.52
RNU6-557P-201ENST00000516842 HOMER2Q9NSB8 354 aa-0.69□□□□□ -2.52
RNU6-557P-201ENST00000516842 OSER1Q9NX31 292 aa-0.69□□□□□ -2.52
RNU6-557P-201ENST00000516842 MTMR10Q9NXD2 777 aa-0.69□□□□□ -2.52
RNU6-557P-201ENST00000516842 DUX4Q9UBX2 424 aa-0.69□□□□□ -2.52
RNU6-557P-201ENST00000516842 ZNF337Q9Y3M9 751 aa-0.69□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms