RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 NPEPPSL1A6NEC2 478 aa12.18□□□□□ -0.46
CLCN3-210ENST00000515420 CDC7O00311 574 aa12.18□□□□□ -0.46
CLCN3-210ENST00000515420 CNOT3O75175 753 aaKnown RBP12.18□□□□□ -0.46
CLCN3-210ENST00000515420 GUCA1CO95843 209 aa12.18□□□□□ -0.46
CLCN3-210ENST00000515420 SLC26A3P40879 764 aa12.18□□□□□ -0.46
CLCN3-210ENST00000515420 RAB10P61026 200 aa12.18□□□□□ -0.46
CLCN3-210ENST00000515420 NKG7Q16617 165 aa12.18□□□□□ -0.46
CLCN3-210ENST00000515420 NDUFA9Q16795 377 aa12.18□□□□□ -0.46
CLCN3-210ENST00000515420 ZXDCQ2QGD7 858 aaPredicted RBP12.18□□□□□ -0.46
CLCN3-210ENST00000515420 FRA10AC1Q70Z53 315 aa12.18□□□□□ -0.46
CLCN3-210ENST00000515420 MRGPREQ86SM8 312 aa12.18□□□□□ -0.46
CLCN3-210ENST00000515420 KLHDC8AQ8IYD2 350 aa12.18□□□□□ -0.46
CLCN3-210ENST00000515420 TBC1D19Q8N5T2 526 aa12.18□□□□□ -0.46
CLCN3-210ENST00000515420 OR4K1Q8NGD4 311 aa12.18□□□□□ -0.46
CLCN3-210ENST00000515420 ABHD17AQ96GS6 310 aa12.18□□□□□ -0.46
CLCN3-210ENST00000515420 UBXN10Q96LJ8 280 aa12.18□□□□□ -0.46
CLCN3-210ENST00000515420 CYTH2Q99418 400 aa12.18□□□□□ -0.46
CLCN3-210ENST00000515420 FMO2Q99518 471 aa12.18□□□□□ -0.46
CLCN3-210ENST00000515420 SPSB2Q99619 263 aa12.18□□□□□ -0.46
CLCN3-210ENST00000515420 DRC3Q9H069 523 aa12.18□□□□□ -0.46
CLCN3-210ENST00000515420 ING2Q9H160 280 aa12.18□□□□□ -0.46
CLCN3-210ENST00000515420 ACSS3Q9H6R3 686 aa12.18□□□□□ -0.46
CLCN3-210ENST00000515420 FASNP49327 2511 aaKnown RBP12.18□□□□□ -0.46
CLCN3-210ENST00000515420 BSNQ9UPA5 3926 aa12.18□□□□□ -0.46
CLCN3-210ENST00000515420 VSTM2BA6NLU5 285 aa12.17□□□□□ -0.46
CLCN3-210ENST00000515420 CEACAM4O75871 244 aa12.17□□□□□ -0.46
CLCN3-210ENST00000515420 MED26O95402 600 aa12.17□□□□□ -0.46
CLCN3-210ENST00000515420 UMODP07911 640 aa12.17□□□□□ -0.46
CLCN3-210ENST00000515420 CCDC166P0CW27 439 aa12.17□□□□□ -0.46
CLCN3-210ENST00000515420 CDH1P12830 882 aa12.17□□□□□ -0.46
CLCN3-210ENST00000515420 MMP11P24347 488 aa12.17□□□□□ -0.46
CLCN3-210ENST00000515420 CRABP2P29373 138 aa12.17□□□□□ -0.46
CLCN3-210ENST00000515420 CCR8P51685 355 aa12.17□□□□□ -0.46
CLCN3-210ENST00000515420 NFATC3Q12968 1075 aa12.17□□□□□ -0.46
CLCN3-210ENST00000515420 DSG2Q14126 1118 aa12.17□□□□□ -0.46
CLCN3-210ENST00000515420 SLC9A5Q14940 896 aa12.17□□□□□ -0.46
CLCN3-210ENST00000515420 TGFBIQ15582 683 aa12.17□□□□□ -0.46
CLCN3-210ENST00000515420 TSNQ15631 228 aaKnown RBP12.17□□□□□ -0.46
CLCN3-210ENST00000515420 HKDC1Q2TB90 917 aa12.17□□□□□ -0.46
CLCN3-210ENST00000515420 LACTB2Q53H82 288 aaPredicted RBP12.17□□□□□ -0.46
CLCN3-210ENST00000515420 VN1R4Q7Z5H5 301 aa12.17□□□□□ -0.46
CLCN3-210ENST00000515420 ZNF605Q86T29 641 aa12.17□□□□□ -0.46
CLCN3-210ENST00000515420 TCAIMQ8N3R3 496 aa12.17□□□□□ -0.46
CLCN3-210ENST00000515420 CAMKVQ8NCB2 501 aa12.17□□□□□ -0.46
CLCN3-210ENST00000515420 PYCR2Q96C36 320 aa12.17□□□□□ -0.46
CLCN3-210ENST00000515420 RHBDF1Q96CC6 855 aa12.17□□□□□ -0.46
CLCN3-210ENST00000515420 TM4SF19Q96DZ7 209 aa12.17□□□□□ -0.46
CLCN3-210ENST00000515420 VPS50Q96JG6 964 aa12.17□□□□□ -0.46
CLCN3-210ENST00000515420 FER1L6-AS2Q96M78 137 aa12.17□□□□□ -0.46
CLCN3-210ENST00000515420 OR4K3Q96R72 315 aa12.17□□□□□ -0.46
CLCN3-210ENST00000515420 EGFL8Q99944 293 aa12.17□□□□□ -0.46
CLCN3-210ENST00000515420 SYNPO2LQ9H987 977 aa12.17□□□□□ -0.46
CLCN3-210ENST00000515420 CAB39LQ9H9S4 337 aa12.17□□□□□ -0.46
CLCN3-210ENST00000515420 PELI2Q9HAT8 420 aa12.17□□□□□ -0.46
CLCN3-210ENST00000515420 ACSS2Q9NR19 701 aa12.17□□□□□ -0.46
CLCN3-210ENST00000515420 SEMA3GQ9NS98 782 aa12.17□□□□□ -0.46
CLCN3-210ENST00000515420 C14orf105Q9NVL8 296 aa12.17□□□□□ -0.46
CLCN3-210ENST00000515420 NINJ2Q9NZG7 142 aa12.17□□□□□ -0.46
CLCN3-210ENST00000515420 ZNF282Q9UDV7 671 aaPredicted RBP12.17□□□□□ -0.46
CLCN3-210ENST00000515420 TLK1Q9UKI8 766 aa12.17□□□□□ -0.46
CLCN3-210ENST00000515420 SH2B3Q9UQQ2 575 aa12.17□□□□□ -0.46
CLCN3-210ENST00000515420 MAP4K5Q9Y4K4 846 aa12.17□□□□□ -0.46
CLCN3-210ENST00000515420 PCDHGB7Q9Y5F8 929 aa12.17□□□□□ -0.46
CLCN3-210ENST00000515420 ZNF462Q96JM2 2506 aa12.16□□□□□ -0.46
CLCN3-210ENST00000515420 TRBC2A0A5B9 178 aa12.16□□□□□ -0.46
CLCN3-210ENST00000515420 ARGFXA6NJG6 315 aa12.16□□□□□ -0.46
CLCN3-210ENST00000515420 PCDH17O14917 1159 aa12.16□□□□□ -0.46
CLCN3-210ENST00000515420 P2RX6O15547 441 aa12.16□□□□□ -0.46
CLCN3-210ENST00000515420 PHGDHO43175 533 aaKnown RBP12.16□□□□□ -0.46
CLCN3-210ENST00000515420 KLHL41O60662 606 aa12.16□□□□□ -0.46
CLCN3-210ENST00000515420 IPO13O94829 963 aaKnown RBP12.16□□□□□ -0.46
CLCN3-210ENST00000515420 SLC35G6P0C7Q6 338 aa12.16□□□□□ -0.46
CLCN3-210ENST00000515420 SLC35E2BP0CK96 405 aa12.16□□□□□ -0.46
CLCN3-210ENST00000515420 CD1DP15813 335 aa12.16□□□□□ -0.46
CLCN3-210ENST00000515420 FBLP22087 321 aaKnown RBP12.16□□□□□ -0.46
CLCN3-210ENST00000515420 ECHS1P30084 290 aa12.16□□□□□ -0.46
CLCN3-210ENST00000515420 OR1D4P47884 311 aa12.16□□□□□ -0.46
CLCN3-210ENST00000515420 OCA2Q04671 838 aa12.16□□□□□ -0.46
CLCN3-210ENST00000515420 ATP1A4Q13733 1029 aa12.16□□□□□ -0.46
CLCN3-210ENST00000515420 CSHL1Q14406 222 aa12.16□□□□□ -0.46
CLCN3-210ENST00000515420 SLMAPQ14BN4 828 aa12.16□□□□□ -0.46
CLCN3-210ENST00000515420 FAM69BQ5VUD6 431 aa12.16□□□□□ -0.46
CLCN3-210ENST00000515420 THOC6Q86W42 341 aaKnown RBP12.16□□□□□ -0.46
CLCN3-210ENST00000515420 HPS6Q86YV9 775 aa12.16□□□□□ -0.46
CLCN3-210ENST00000515420 PLD3Q8IV08 490 aa12.16□□□□□ -0.46
CLCN3-210ENST00000515420 MFSD9Q8NBP5 474 aa12.16□□□□□ -0.46
CLCN3-210ENST00000515420 SLC5A11Q8WWX8 675 aa12.16□□□□□ -0.46
CLCN3-210ENST00000515420 KIAA1191Q96A73 305 aa12.16□□□□□ -0.46
CLCN3-210ENST00000515420 COL26A1Q96A83 441 aa12.16□□□□□ -0.46
CLCN3-210ENST00000515420 ALKBH8Q96BT7 664 aaKnown RBP12.16□□□□□ -0.46
CLCN3-210ENST00000515420 CAPS2Q9BXY5 557 aa12.16□□□□□ -0.46
CLCN3-210ENST00000515420 TRIM55Q9BYV6 548 aa12.16□□□□□ -0.46
CLCN3-210ENST00000515420 TGIF2Q9GZN2 237 aa12.16□□□□□ -0.46
CLCN3-210ENST00000515420 CDC42EP4Q9H3Q1 356 aaKnown RBP12.16□□□□□ -0.46
CLCN3-210ENST00000515420 CNOT10Q9H9A5 744 aaKnown RBP12.16□□□□□ -0.46
CLCN3-210ENST00000515420 MLXIPLQ9NP71 852 aa12.16□□□□□ -0.46
CLCN3-210ENST00000515420 CTSFQ9UBX1 484 aa12.16□□□□□ -0.46
CLCN3-210ENST00000515420 ANAPC2Q9UJX6 822 aa12.16□□□□□ -0.46
CLCN3-210ENST00000515420 G3BP2Q9UN86 482 aaKnown RBP12.16□□□□□ -0.46
CLCN3-210ENST00000515420 DYRK1BQ9Y463 629 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms