RNA–Protein interactions for RNA: ENST00000510030.2

SCAMP1-203, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 4

Gene SCAMP1, Length 477 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-203ENST00000510030 RHBGQ9H310 441 aa16.09■□□□□ 0.17
SCAMP1-203ENST00000510030 WDR55Q9H6Y2 383 aaPredicted RBP16.09■□□□□ 0.17
SCAMP1-203ENST00000510030 LRIT1Q9P2V4 623 aa16.09■□□□□ 0.17
SCAMP1-203ENST00000510030 BTRCQ9Y297 605 aa16.09■□□□□ 0.17
SCAMP1-203ENST00000510030 FAM186AA6NE01 2351 aa16.09■□□□□ 0.17
SCAMP1-203ENST00000510030 ZNF292O60281 2723 aa16.08■□□□□ 0.16
SCAMP1-203ENST00000510030 A0A0J9YY10 115 aa16.08■□□□□ 0.16
SCAMP1-203ENST00000510030 MED19A0JLT2 244 aaPredicted RBP16.08■□□□□ 0.16
SCAMP1-203ENST00000510030 CCT8L1PA6NM43 557 aa16.08■□□□□ 0.16
SCAMP1-203ENST00000510030 BTN3A3O00478 584 aa16.08■□□□□ 0.16
SCAMP1-203ENST00000510030 TNFSF14O43557 240 aa16.08■□□□□ 0.16
SCAMP1-203ENST00000510030 DUX1O43812 170 aa16.08■□□□□ 0.16
SCAMP1-203ENST00000510030 HNRNPCL1O60812 293 aaKnown RBP16.08■□□□□ 0.16
SCAMP1-203ENST00000510030 LRP3O75074 770 aa16.08■□□□□ 0.16
SCAMP1-203ENST00000510030 PDYNP01213 254 aa16.08■□□□□ 0.16
SCAMP1-203ENST00000510030 JUNP05412 331 aaKnown RBP16.08■□□□□ 0.16
SCAMP1-203ENST00000510030 PROS1P07225 676 aa16.08■□□□□ 0.16
SCAMP1-203ENST00000510030 PCNAP12004 261 aa16.08■□□□□ 0.16
SCAMP1-203ENST00000510030 UGT2B7P16662 529 aa16.08■□□□□ 0.16
SCAMP1-203ENST00000510030 NCF2P19878 526 aaPredicted RBP16.08■□□□□ 0.16
SCAMP1-203ENST00000510030 VARSP26640 1264 aaKnown RBP16.08■□□□□ 0.16
SCAMP1-203ENST00000510030 AHRP35869 848 aa16.08■□□□□ 0.16
SCAMP1-203ENST00000510030 RPS15AP62244 130 aaKnown RBP16.08■□□□□ 0.16
SCAMP1-203ENST00000510030 BNIP3Q12983 259 aa16.08■□□□□ 0.16
SCAMP1-203ENST00000510030 LPAL2Q16609 132 aa16.08■□□□□ 0.16
SCAMP1-203ENST00000510030 SPIN4Q56A73 249 aa16.08■□□□□ 0.16
SCAMP1-203ENST00000510030 PLA2G2CQ5R387 149 aa16.08■□□□□ 0.16
SCAMP1-203ENST00000510030 MTDHQ86UE4 582 aaKnown RBP16.08■□□□□ 0.16
SCAMP1-203ENST00000510030 TRPV3Q8NET8 790 aa16.08■□□□□ 0.16
SCAMP1-203ENST00000510030 ZDHHC12Q96GR4 267 aa16.08■□□□□ 0.16
SCAMP1-203ENST00000510030 AHCYL2Q96HN2 611 aaKnown RBP16.08■□□□□ 0.16
SCAMP1-203ENST00000510030 OR52B2Q96RD2 323 aa16.08■□□□□ 0.16
SCAMP1-203ENST00000510030 DPYSL5Q9BPU6 564 aa16.08■□□□□ 0.16
SCAMP1-203ENST00000510030 DPH7Q9BTV6 452 aa16.08■□□□□ 0.16
SCAMP1-203ENST00000510030 TUBB1Q9H4B7 451 aa16.08■□□□□ 0.16
SCAMP1-203ENST00000510030 AKTIPQ9H8T0 292 aa16.08■□□□□ 0.16
SCAMP1-203ENST00000510030 C1orf109Q9NX04 203 aa16.08■□□□□ 0.16
SCAMP1-203ENST00000510030 AHSPQ9NZD4 102 aa16.08■□□□□ 0.16
SCAMP1-203ENST00000510030 NOP53Q9NZM5 478 aaKnown RBP16.08■□□□□ 0.16
SCAMP1-203ENST00000510030 VPS29Q9UBQ0 182 aa16.08■□□□□ 0.16
SCAMP1-203ENST00000510030 EPHA6Q9UF33 1036 aa16.08■□□□□ 0.16
SCAMP1-203ENST00000510030 POMT2Q9UKY4 750 aa16.08■□□□□ 0.16
SCAMP1-203ENST00000510030 PADI4Q9UM07 663 aa16.08■□□□□ 0.16
SCAMP1-203ENST00000510030 EIF3LQ9Y262 564 aaKnown RBP16.08■□□□□ 0.16
SCAMP1-203ENST00000510030 PRAMEF33A0A0G2JMD5 474 aa16.07■□□□□ 0.16
SCAMP1-203ENST00000510030 E9PBE3 544 aa16.07■□□□□ 0.16
SCAMP1-203ENST00000510030 H7BY64 318 aa16.07■□□□□ 0.16
SCAMP1-203ENST00000510030 FCHO1O14526 889 aa16.07■□□□□ 0.16
SCAMP1-203ENST00000510030 PPM1DO15297 605 aa16.07■□□□□ 0.16
SCAMP1-203ENST00000510030 KLHL41O60662 606 aa16.07■□□□□ 0.16
SCAMP1-203ENST00000510030 MYO1DO94832 1006 aa16.07■□□□□ 0.16
SCAMP1-203ENST00000510030 PRR35P0CG20 571 aa16.07■□□□□ 0.16
SCAMP1-203ENST00000510030 ENGP17813 658 aa16.07■□□□□ 0.16
SCAMP1-203ENST00000510030 POLR2CP19387 275 aaPredicted RBP16.07■□□□□ 0.16
SCAMP1-203ENST00000510030 CD22P20273 847 aa16.07■□□□□ 0.16
SCAMP1-203ENST00000510030 PTX3P26022 381 aaPredicted RBP16.07■□□□□ 0.16
SCAMP1-203ENST00000510030 PSMB5P28074 263 aa16.07■□□□□ 0.16
SCAMP1-203ENST00000510030 MNAT1P51948 309 aa16.07■□□□□ 0.16
SCAMP1-203ENST00000510030 ARFIP1P53367 373 aa16.07■□□□□ 0.16
SCAMP1-203ENST00000510030 CSNK1G2P78368 415 aa16.07■□□□□ 0.16
SCAMP1-203ENST00000510030 EMX2Q04743 252 aa16.07■□□□□ 0.16
SCAMP1-203ENST00000510030 SF3A3Q12874 501 aaKnown RBP eCLIP16.07■□□□□ 0.16
SCAMP1-203ENST00000510030 TUBB3Q13509 450 aa16.07■□□□□ 0.16
SCAMP1-203ENST00000510030 SQLEQ14534 574 aa16.07■□□□□ 0.16
SCAMP1-203ENST00000510030 MAPRE2Q15555 327 aa16.07■□□□□ 0.16
SCAMP1-203ENST00000510030 CLPPQ16740 277 aaPredicted RBP16.07■□□□□ 0.16
SCAMP1-203ENST00000510030 CACHD1Q5VU97 1274 aa16.07■□□□□ 0.16
SCAMP1-203ENST00000510030 CCDC121Q6ZUS5 278 aa16.07■□□□□ 0.16
SCAMP1-203ENST00000510030 CHSY3Q70JA7 882 aa16.07■□□□□ 0.16
SCAMP1-203ENST00000510030 YTHDF3Q7Z739 585 aaKnown RBP16.07■□□□□ 0.16
SCAMP1-203ENST00000510030 CLNKQ7Z7G1 428 aa16.07■□□□□ 0.16
SCAMP1-203ENST00000510030 SLC35F3Q8IY50 421 aa16.07■□□□□ 0.16
SCAMP1-203ENST00000510030 ZNF655Q8N720 491 aaPredicted RBP16.07■□□□□ 0.16
SCAMP1-203ENST00000510030 FNDC5Q8NAU1 212 aa16.07■□□□□ 0.16
SCAMP1-203ENST00000510030 ERP27Q96DN0 273 aa16.07■□□□□ 0.16
SCAMP1-203ENST00000510030 CMTM7Q96FZ5 175 aa16.07■□□□□ 0.16
SCAMP1-203ENST00000510030 PPP1R36Q96LQ0 422 aa16.07■□□□□ 0.16
SCAMP1-203ENST00000510030 PRAP1Q96NZ9 151 aa16.07■□□□□ 0.16
SCAMP1-203ENST00000510030 OR2A14Q96R47 310 aa16.07■□□□□ 0.16
SCAMP1-203ENST00000510030 GTPBP2Q9BX10 602 aaKnown RBP16.07■□□□□ 0.16
SCAMP1-203ENST00000510030 LRTM1Q9HBL6 345 aa16.07■□□□□ 0.16
SCAMP1-203ENST00000510030 SAR1AQ9NR31 198 aa16.07■□□□□ 0.16
SCAMP1-203ENST00000510030 ASIC5Q9NY37 505 aa16.07■□□□□ 0.16
SCAMP1-203ENST00000510030 SPHK1Q9NYA1 384 aa16.07■□□□□ 0.16
SCAMP1-203ENST00000510030 MAPRE3Q9UPY8 281 aa16.07■□□□□ 0.16
SCAMP1-203ENST00000510030 CAPN7Q9Y6W3 813 aa16.07■□□□□ 0.16
SCAMP1-203ENST00000510030 KNL1Q8NG31 2342 aa16.07■□□□□ 0.16
SCAMP1-203ENST00000510030 ATP6AP2A0A1C7CYW4 349 aa16.06■□□□□ 0.16
SCAMP1-203ENST00000510030 LSM1O15116 133 aaKnown RBP16.06■□□□□ 0.16
SCAMP1-203ENST00000510030 PRAMEF4O60810 478 aa16.06■□□□□ 0.16
SCAMP1-203ENST00000510030 CLEC3AO75596 197 aa16.06■□□□□ 0.16
SCAMP1-203ENST00000510030 ATP6AP2O75787 350 aa16.06■□□□□ 0.16
SCAMP1-203ENST00000510030 ATP5HO75947 161 aa16.06■□□□□ 0.16
SCAMP1-203ENST00000510030 SEMA3DO95025 777 aa16.06■□□□□ 0.16
SCAMP1-203ENST00000510030 PEBP1P30086 187 aaKnown RBP16.06■□□□□ 0.16
SCAMP1-203ENST00000510030 GRK6P43250 576 aa16.06■□□□□ 0.16
SCAMP1-203ENST00000510030 MRPL19P49406 292 aaKnown RBP16.06■□□□□ 0.16
SCAMP1-203ENST00000510030 PPM1FP49593 454 aaPredicted RBP16.06■□□□□ 0.16
SCAMP1-203ENST00000510030 HTR6P50406 440 aa16.06■□□□□ 0.16
SCAMP1-203ENST00000510030 SLC14A1Q13336 389 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms