RNA–Protein interactions for RNA: ENST00000508282.1

DHFR-204, Transcript of dihydrofolate reductase, humanhuman

TSL 3

Gene DHFR, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-204ENST00000508282 NAA16Q6N069 864 aaPredicted RBP4.12□□□□□ -1.75
DHFR-204ENST00000508282 CREBRFQ8IUR6 639 aa4.12□□□□□ -1.75
DHFR-204ENST00000508282 MAML2Q8IZL2 1156 aaPredicted RBP4.12□□□□□ -1.75
DHFR-204ENST00000508282 RASGEF1AQ8N9B8 481 aa4.12□□□□□ -1.75
DHFR-204ENST00000508282 MIPOL1Q8TD10 442 aa4.12□□□□□ -1.75
DHFR-204ENST00000508282 VMP1Q96GC9 406 aa4.12□□□□□ -1.75
DHFR-204ENST00000508282 SPATA17Q96L03 361 aa4.12□□□□□ -1.75
DHFR-204ENST00000508282 C2orf48Q96LS8 159 aa4.12□□□□□ -1.75
DHFR-204ENST00000508282 FOXN4Q96NZ1 517 aa4.12□□□□□ -1.75
DHFR-204ENST00000508282 AGAP4Q96P64 663 aa4.12□□□□□ -1.75
DHFR-204ENST00000508282 OVOL2Q9BRP0 275 aa4.12□□□□□ -1.75
DHFR-204ENST00000508282 NYXQ9GZU5 481 aa4.12□□□□□ -1.75
DHFR-204ENST00000508282 DNAJC4Q9NNZ3 241 aa4.12□□□□□ -1.75
DHFR-204ENST00000508282 NDE1Q9NXR1 346 aa4.12□□□□□ -1.75
DHFR-204ENST00000508282 ZHX2Q9Y6X8 837 aa4.12□□□□□ -1.75
DHFR-204ENST00000508282 BICDL2A1A5D9 508 aa4.11□□□□□ -1.75
DHFR-204ENST00000508282 CLDN4O14493 209 aa4.11□□□□□ -1.75
DHFR-204ENST00000508282 BAG3O95817 575 aa4.11□□□□□ -1.75
DHFR-204ENST00000508282 HSP90AB1P08238 724 aaKnown RBP4.11□□□□□ -1.75
DHFR-204ENST00000508282 CAPN2P17655 700 aa4.11□□□□□ -1.75
DHFR-204ENST00000508282 OAS2P29728 719 aaKnown RBP4.11□□□□□ -1.75
DHFR-204ENST00000508282 OR3A2P47893 321 aa4.11□□□□□ -1.75
DHFR-204ENST00000508282 KRT83P78385 493 aa4.11□□□□□ -1.75
DHFR-204ENST00000508282 PAX8Q06710 450 aa4.11□□□□□ -1.75
DHFR-204ENST00000508282 RASGEF1BQ0VAM2 473 aa4.11□□□□□ -1.75
DHFR-204ENST00000508282 PRPF4BQ13523 1007 aaKnown RBP4.11□□□□□ -1.75
DHFR-204ENST00000508282 TRIM29Q14134 588 aa4.11□□□□□ -1.75
DHFR-204ENST00000508282 RPUSD3Q6P087 351 aaKnown RBP4.11□□□□□ -1.75
DHFR-204ENST00000508282 NOA1Q8NC60 698 aaKnown RBP4.11□□□□□ -1.75
DHFR-204ENST00000508282 KCNE4Q8WWG9 221 aa4.11□□□□□ -1.75
DHFR-204ENST00000508282 PIK3R3Q92569 461 aa4.11□□□□□ -1.75
DHFR-204ENST00000508282 PROX1Q92786 737 aa4.11□□□□□ -1.75
DHFR-204ENST00000508282 LRRC3BQ96PB8 259 aa4.11□□□□□ -1.75
DHFR-204ENST00000508282 SOSTQ9BQB4 213 aa4.11□□□□□ -1.75
DHFR-204ENST00000508282 HOXD1Q9GZZ0 328 aa4.11□□□□□ -1.75
DHFR-204ENST00000508282 ZWILCHQ9H900 591 aa4.11□□□□□ -1.75
DHFR-204ENST00000508282 AP5Z1O43299 807 aa4.1□□□□□ -1.75
DHFR-204ENST00000508282 SRSF10O75494 262 aaKnown RBP4.1□□□□□ -1.75
DHFR-204ENST00000508282 CEACAM4O75871 244 aa4.1□□□□□ -1.75
DHFR-204ENST00000508282 GSRP00390 522 aa4.1□□□□□ -1.75
DHFR-204ENST00000508282 OR52Z1P0C646 297 aa4.1□□□□□ -1.75
DHFR-204ENST00000508282 PRKAR1AP10644 381 aa4.1□□□□□ -1.75
DHFR-204ENST00000508282 ALDH1B1P30837 517 aa4.1□□□□□ -1.75
DHFR-204ENST00000508282 CAPZA2P47755 286 aa4.1□□□□□ -1.75
DHFR-204ENST00000508282 NOVP48745 357 aa4.1□□□□□ -1.75
DHFR-204ENST00000508282 IRX4P78413 519 aa4.1□□□□□ -1.75
DHFR-204ENST00000508282 ACSM1Q08AH1 577 aa4.1□□□□□ -1.75
DHFR-204ENST00000508282 COX10Q12887 443 aa4.1□□□□□ -1.75
DHFR-204ENST00000508282 TRA2AQ13595 282 aaKnown RBP eCLIP4.1□□□□□ -1.75
DHFR-204ENST00000508282 TMEM266Q2M3C6 531 aa4.1□□□□□ -1.75
DHFR-204ENST00000508282 ARMC4Q5T2S8 1044 aa4.1□□□□□ -1.75
DHFR-204ENST00000508282 NOTUMQ6P988 496 aa4.1□□□□□ -1.75
DHFR-204ENST00000508282 RBPMS2Q6ZRY4 209 aaKnown RBP4.1□□□□□ -1.75
DHFR-204ENST00000508282 SNX32Q86XE0 403 aa4.1□□□□□ -1.75
DHFR-204ENST00000508282 CDC20BQ86Y33 519 aa4.1□□□□□ -1.75
DHFR-204ENST00000508282 ANKRD13CQ8N6S4 541 aa4.1□□□□□ -1.75
DHFR-204ENST00000508282 XXYLT1Q8NBI6 393 aa4.1□□□□□ -1.75
DHFR-204ENST00000508282 CNRIP1Q96F85 164 aaPredicted RBP4.1□□□□□ -1.75
DHFR-204ENST00000508282 ADPGKQ9BRR6 497 aa4.1□□□□□ -1.75
DHFR-204ENST00000508282 TDRD1Q9BXT4 1180 aaKnown RBP4.1□□□□□ -1.75
DHFR-204ENST00000508282 TRIM6Q9C030 488 aaPredicted RBP4.1□□□□□ -1.75
DHFR-204ENST00000508282 CCDC177Q9NQR7 707 aaPredicted RBP4.1□□□□□ -1.75
DHFR-204ENST00000508282 GSN-AS1Q9NRJ2 163 aa4.1□□□□□ -1.75
DHFR-204ENST00000508282 ARGLU1Q9NWB6 273 aaPredicted RBP4.1□□□□□ -1.75
DHFR-204ENST00000508282 TBC1D7Q9P0N9 293 aa4.1□□□□□ -1.75
DHFR-204ENST00000508282 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.1□□□□□ -1.752e-6■■■□□ 15
DHFR-204ENST00000508282 WIPI2Q9Y4P8 454 aa4.1□□□□□ -1.75
DHFR-204ENST00000508282 LOC105371242A0A075B767 164 aa4.09□□□□□ -1.75
DHFR-204ENST00000508282 TRAV24A0A0B4J272 114 aa4.09□□□□□ -1.75
DHFR-204ENST00000508282 TRBV4-1A0A0J9YWV2 114 aa4.09□□□□□ -1.75
DHFR-204ENST00000508282 SNX3O60493 162 aa4.09□□□□□ -1.75
DHFR-204ENST00000508282 TBCAO75347 108 aaKnown RBP4.09□□□□□ -1.75
DHFR-204ENST00000508282 HSPA4LO95757 839 aa4.09□□□□□ -1.75
DHFR-204ENST00000508282 ELAVL4P26378 380 aaKnown RBP4.09□□□□□ -1.75
DHFR-204ENST00000508282 CSRP3P50461 194 aa4.09□□□□□ -1.75
DHFR-204ENST00000508282 UBASH3AP57075 661 aa4.09□□□□□ -1.75
DHFR-204ENST00000508282 RBPJQ06330 500 aa4.09□□□□□ -1.75
DHFR-204ENST00000508282 ZNF774Q6NX45 483 aa4.09□□□□□ -1.75
DHFR-204ENST00000508282 GALNTL5Q7Z4T8 443 aa4.09□□□□□ -1.75
DHFR-204ENST00000508282 FAM89BQ8N5H3 189 aa4.09□□□□□ -1.75
DHFR-204ENST00000508282 ATP8B4Q8TF62 1192 aa4.09□□□□□ -1.75
DHFR-204ENST00000508282 LRRC15Q8TF66 581 aa4.09□□□□□ -1.75
DHFR-204ENST00000508282 ROBO4Q8WZ75 1007 aa4.09□□□□□ -1.75
DHFR-204ENST00000508282 ATXN7L3BQ96GX2 97 aa4.09□□□□□ -1.75
DHFR-204ENST00000508282 OR10A4Q9H209 315 aa4.09□□□□□ -1.75
DHFR-204ENST00000508282 PANK3Q9H999 370 aa4.09□□□□□ -1.75
DHFR-204ENST00000508282 B3GAT2Q9NPZ5 323 aa4.09□□□□□ -1.75
DHFR-204ENST00000508282 TXNDC16Q9P2K2 825 aa4.09□□□□□ -1.75
DHFR-204ENST00000508282 WDR35Q9P2L0 1181 aa4.09□□□□□ -1.75
DHFR-204ENST00000508282 PRDM4Q9UKN5 801 aa4.09□□□□□ -1.75
DHFR-204ENST00000508282 ASB14A6NK59 587 aa4.08□□□□□ -1.76
DHFR-204ENST00000508282 RPS6KA5O75582 802 aa4.08□□□□□ -1.76
DHFR-204ENST00000508282 IGHV3-13P01766 116 aa4.08□□□□□ -1.76
DHFR-204ENST00000508282 ACHEP22303 614 aa4.08□□□□□ -1.76
DHFR-204ENST00000508282 CPT2P23786 658 aa4.08□□□□□ -1.76
DHFR-204ENST00000508282 EEF1B2P24534 225 aaKnown RBP4.08□□□□□ -1.76
DHFR-204ENST00000508282 CALRP27797 417 aaKnown RBP4.08□□□□□ -1.76
DHFR-204ENST00000508282 PDHA2P29803 388 aa4.08□□□□□ -1.76
DHFR-204ENST00000508282 SGCGQ13326 291 aa4.08□□□□□ -1.76
DHFR-204ENST00000508282 OPCMLQ14982 345 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms