RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 IGHEP01854 428 aa8.11□□□□□ -1.11
PDGFC-205ENST00000506880 ENO1P06733 434 aaKnown RBP8.11□□□□□ -1.11
PDGFC-205ENST00000506880 SERPINA6P08185 405 aa8.11□□□□□ -1.11
PDGFC-205ENST00000506880 RPS17P08708 135 aaKnown RBP8.11□□□□□ -1.11
PDGFC-205ENST00000506880 CCNYL3P0C7X3 344 aa8.11□□□□□ -1.11
PDGFC-205ENST00000506880 C1GALT1C1LP0DN25 315 aa8.11□□□□□ -1.11
PDGFC-205ENST00000506880 MYL2P10916 166 aa8.11□□□□□ -1.11
PDGFC-205ENST00000506880 MYF5P13349 255 aa8.11□□□□□ -1.11
PDGFC-205ENST00000506880 ITGAXP20702 1163 aa8.11□□□□□ -1.11
PDGFC-205ENST00000506880 MAGP20916 626 aa8.11□□□□□ -1.11
PDGFC-205ENST00000506880 GRK2P25098 689 aa8.11□□□□□ -1.11
PDGFC-205ENST00000506880 ABCG1P45844 678 aa8.11□□□□□ -1.11
PDGFC-205ENST00000506880 GSTM5P46439 218 aa8.11□□□□□ -1.11
PDGFC-205ENST00000506880 GCGRP47871 477 aa8.11□□□□□ -1.11
PDGFC-205ENST00000506880 STXBP1P61764 594 aaKnown RBP8.11□□□□□ -1.11
PDGFC-205ENST00000506880 REEP5Q00765 189 aa8.11□□□□□ -1.11
PDGFC-205ENST00000506880 RGS1Q08116 209 aa8.11□□□□□ -1.11
PDGFC-205ENST00000506880 DLG1Q12959 904 aa8.11□□□□□ -1.11
PDGFC-205ENST00000506880 GPS2Q13227 327 aa8.11□□□□□ -1.11
PDGFC-205ENST00000506880 BIKQ13323 160 aa8.11□□□□□ -1.11
PDGFC-205ENST00000506880 RCN2Q14257 317 aa8.11□□□□□ -1.11
PDGFC-205ENST00000506880 HERC3Q15034 1050 aa8.11□□□□□ -1.11
PDGFC-205ENST00000506880 PRTGQ2VWP7 1150 aa8.11□□□□□ -1.11
PDGFC-205ENST00000506880 TMEM35AQ53FP2 167 aa8.11□□□□□ -1.11
PDGFC-205ENST00000506880 CEP85LQ5SZL2 805 aa8.11□□□□□ -1.11
PDGFC-205ENST00000506880 LIPMQ5VYY2 423 aa8.11□□□□□ -1.11
PDGFC-205ENST00000506880 KIAA1614Q5VZ46 1190 aa8.11□□□□□ -1.11
PDGFC-205ENST00000506880 ZYG11AQ6WRX3 759 aa8.11□□□□□ -1.11
PDGFC-205ENST00000506880 SLCO4C1Q6ZQN7 724 aa8.11□□□□□ -1.11
PDGFC-205ENST00000506880 DTX1Q86Y01 620 aa8.11□□□□□ -1.11
PDGFC-205ENST00000506880 MCATQ8IVS2 390 aaKnown RBP8.11□□□□□ -1.11
PDGFC-205ENST00000506880 TRIM42Q8IWZ5 723 aa8.11□□□□□ -1.11
PDGFC-205ENST00000506880 TMEM151AQ8N4L1 468 aa8.11□□□□□ -1.11
PDGFC-205ENST00000506880 MFSD9Q8NBP5 474 aa8.11□□□□□ -1.11
PDGFC-205ENST00000506880 NT5CQ8TCD5 201 aa8.11□□□□□ -1.11
PDGFC-205ENST00000506880 EPS8L3Q8TE67 593 aaKnown RBP8.11□□□□□ -1.11
PDGFC-205ENST00000506880 MED8Q96G25 268 aa8.11□□□□□ -1.11
PDGFC-205ENST00000506880 SCYL1Q96KG9 808 aa8.11□□□□□ -1.11
PDGFC-205ENST00000506880 OR2A5Q96R48 311 aa8.11□□□□□ -1.11
PDGFC-205ENST00000506880 ZNF382Q96SR6 550 aa8.11□□□□□ -1.11
PDGFC-205ENST00000506880 SELENOSQ9BQE4 189 aa8.11□□□□□ -1.11
PDGFC-205ENST00000506880 NDC1Q9BTX1 674 aa8.11□□□□□ -1.11
PDGFC-205ENST00000506880 SLC29A3Q9BZD2 475 aa8.11□□□□□ -1.11
PDGFC-205ENST00000506880 XKR8Q9H6D3 395 aa8.11□□□□□ -1.11
PDGFC-205ENST00000506880 ABCF3Q9NUQ8 709 aa8.11□□□□□ -1.11
PDGFC-205ENST00000506880 PCMTD2Q9NV79 361 aa8.11□□□□□ -1.11
PDGFC-205ENST00000506880 XPR1Q9UBH6 696 aa8.11□□□□□ -1.11
PDGFC-205ENST00000506880 TBK1Q9UHD2 729 aa8.11□□□□□ -1.11
PDGFC-205ENST00000506880 ZFP69BQ9UJL9 534 aa8.11□□□□□ -1.11
PDGFC-205ENST00000506880 SLC22A14Q9Y267 594 aa8.11□□□□□ -1.11
PDGFC-205ENST00000506880 PADI2Q9Y2J8 665 aa8.11□□□□□ -1.11
PDGFC-205ENST00000506880 ANGPTL3Q9Y5C1 460 aa8.11□□□□□ -1.11
PDGFC-205ENST00000506880 PCDHGA6Q9Y5G7 932 aa8.11□□□□□ -1.11
PDGFC-205ENST00000506880 PCDHGA4Q9Y5G9 962 aa8.11□□□□□ -1.11
PDGFC-205ENST00000506880 SPEGQ15772 3267 aa8.1□□□□□ -1.11
PDGFC-205ENST00000506880 PRAMEF33A0A0G2JMD5 474 aa8.1□□□□□ -1.11
PDGFC-205ENST00000506880 A0A1B0GX78 115 aa8.1□□□□□ -1.11
PDGFC-205ENST00000506880 TLDC2A0PJX2 215 aa8.1□□□□□ -1.11
PDGFC-205ENST00000506880 E2F3O00716 465 aa8.1□□□□□ -1.11
PDGFC-205ENST00000506880 CDK2AP1O14519 115 aa8.1□□□□□ -1.11
PDGFC-205ENST00000506880 TYROBPO43914 113 aa8.1□□□□□ -1.11
PDGFC-205ENST00000506880 KLHL41O60662 606 aa8.1□□□□□ -1.11
PDGFC-205ENST00000506880 TRIM13O60858 407 aa8.1□□□□□ -1.11
PDGFC-205ENST00000506880 PIAS1O75925 651 aa8.1□□□□□ -1.11
PDGFC-205ENST00000506880 OR2B3O76000 313 aa8.1□□□□□ -1.11
PDGFC-205ENST00000506880 WDR47O94967 919 aa8.1□□□□□ -1.11
PDGFC-205ENST00000506880 SEMA3DO95025 777 aa8.1□□□□□ -1.11
PDGFC-205ENST00000506880 PROCP04070 461 aa8.1□□□□□ -1.11
PDGFC-205ENST00000506880 AGXTP21549 392 aa8.1□□□□□ -1.11
PDGFC-205ENST00000506880 SCTRP47872 440 aa8.1□□□□□ -1.11
PDGFC-205ENST00000506880 HK2P52789 917 aa8.1□□□□□ -1.11
PDGFC-205ENST00000506880 CSNK1G2P78368 415 aa8.1□□□□□ -1.11
PDGFC-205ENST00000506880 MEF2AQ02078 507 aaPredicted RBP8.1□□□□□ -1.11
PDGFC-205ENST00000506880 IRF8Q02556 426 aa8.1□□□□□ -1.11
PDGFC-205ENST00000506880 LCP2Q13094 533 aa8.1□□□□□ -1.11
PDGFC-205ENST00000506880 GTF2H2Q13888 395 aa8.1□□□□□ -1.11
PDGFC-205ENST00000506880 FASTKQ14296 549 aaKnown RBP8.1□□□□□ -1.11
PDGFC-205ENST00000506880 PFKFB4Q16877 469 aa8.1□□□□□ -1.11
PDGFC-205ENST00000506880 CCSMST1Q4G0I0 132 aa8.1□□□□□ -1.11
PDGFC-205ENST00000506880 CCDC157Q569K6 752 aa8.1□□□□□ -1.11
PDGFC-205ENST00000506880 C3orf38Q5JPI3 329 aa8.1□□□□□ -1.11
PDGFC-205ENST00000506880 FCRL6Q6DN72 434 aa8.1□□□□□ -1.11
PDGFC-205ENST00000506880 GRHL2Q6ISB3 625 aa8.1□□□□□ -1.11
PDGFC-205ENST00000506880 GTF2H2CQ6P1K8 395 aa8.1□□□□□ -1.11
PDGFC-205ENST00000506880 TMIGD1Q6UXZ0 262 aa8.1□□□□□ -1.11
PDGFC-205ENST00000506880 CDHR3Q6ZTQ4 885 aa8.1□□□□□ -1.11
PDGFC-205ENST00000506880 ABHD13Q7L211 337 aa8.1□□□□□ -1.11
PDGFC-205ENST00000506880 LAS2Q8IYD9 372 aa8.1□□□□□ -1.11
PDGFC-205ENST00000506880 LRRC34Q8IZ02 419 aa8.1□□□□□ -1.11
PDGFC-205ENST00000506880 NLGN4XQ8N0W4 816 aa8.1□□□□□ -1.11
PDGFC-205ENST00000506880 NLGN4YQ8NFZ3 816 aaPredicted RBP8.1□□□□□ -1.11
PDGFC-205ENST00000506880 UHMK1Q8TAS1 419 aaKnown RBP8.1□□□□□ -1.11
PDGFC-205ENST00000506880 SNRNP27Q8WVK2 155 aaKnown RBP8.1□□□□□ -1.11
PDGFC-205ENST00000506880 NEIL2Q969S2 332 aa8.1□□□□□ -1.11
PDGFC-205ENST00000506880 KIAA1143Q96AT1 154 aaPredicted RBP8.1□□□□□ -1.11
PDGFC-205ENST00000506880 TM4SF19Q96DZ7 209 aa8.1□□□□□ -1.11
PDGFC-205ENST00000506880 MRRFQ96E11 262 aaKnown RBP8.1□□□□□ -1.11
PDGFC-205ENST00000506880 CNDP1Q96KN2 507 aa8.1□□□□□ -1.11
PDGFC-205ENST00000506880 IL17FQ96PD4 163 aa8.1□□□□□ -1.11
PDGFC-205ENST00000506880 OR6C1Q96RD1 312 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms