RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 BTBD1Q9H0C5 482 aa20.56■□□□□ 0.88
UBE2D3-216ENST00000503742 TRIT1Q9H3H1 467 aaKnown RBP20.56■□□□□ 0.88
UBE2D3-216ENST00000503742 KAT8Q9H7Z6 458 aaKnown RBP20.56■□□□□ 0.88
UBE2D3-216ENST00000503742 COQ10BQ9H8M1 238 aa20.56■□□□□ 0.88
UBE2D3-216ENST00000503742 SPATA7Q9P0W8 599 aa20.56■□□□□ 0.88
UBE2D3-216ENST00000503742 CD207Q9UJ71 328 aa20.56■□□□□ 0.88
UBE2D3-216ENST00000503742 ANAPC2Q9UJX6 822 aa20.56■□□□□ 0.88
UBE2D3-216ENST00000503742 RAB26Q9ULW5 256 aa20.56■□□□□ 0.88
UBE2D3-216ENST00000503742 WDR37Q9Y2I8 494 aa20.56■□□□□ 0.88
UBE2D3-216ENST00000503742 TIA1P31483 386 aaKnown RBP eCLIP20.55■□□□□ 0.881e-7■■■■□ 20.9
UBE2D3-216ENST00000503742 CDKN2CP42773 168 aa20.55■□□□□ 0.88
UBE2D3-216ENST00000503742 ASMTP46597 345 aa20.55■□□□□ 0.88
UBE2D3-216ENST00000503742 USP30Q70CQ3 517 aa20.55■□□□□ 0.88
UBE2D3-216ENST00000503742 CALHM3Q86XJ0 350 aa20.55■□□□□ 0.88
UBE2D3-216ENST00000503742 TMEM132CQ8N3T6 1108 aa20.55■□□□□ 0.88
UBE2D3-216ENST00000503742 NRTNQ99748 197 aa20.55■□□□□ 0.88
UBE2D3-216ENST00000503742 APOOQ9BUR5 198 aa20.55■□□□□ 0.88
UBE2D3-216ENST00000503742 VCXQ9H320 206 aa20.55■□□□□ 0.88
UBE2D3-216ENST00000503742 GORASP2Q9H8Y8 452 aa20.55■□□□□ 0.88
UBE2D3-216ENST00000503742 MAGEA13PA6NCF6 341 aa20.55■□□□□ 0.88
UBE2D3-216ENST00000503742 C2CD4DB7Z1M9 353 aa20.55■□□□□ 0.88
UBE2D3-216ENST00000503742 SH3BGRLO75368 114 aa20.55■□□□□ 0.88
UBE2D3-216ENST00000503742 SMNDC1O75940 238 aaKnown RBP eCLIP20.55■□□□□ 0.883e-7■■□□□ 11.4
UBE2D3-216ENST00000503742 ANXA4P09525 319 aaPredicted RBP20.55■□□□□ 0.88
UBE2D3-216ENST00000503742 CDH1P12830 882 aa20.55■□□□□ 0.88
UBE2D3-216ENST00000503742 PIK3CBP42338 1070 aa20.55■□□□□ 0.88
UBE2D3-216ENST00000503742 TRPC1P48995 793 aa20.55■□□□□ 0.88
UBE2D3-216ENST00000503742 GZMMP51124 257 aa20.55■□□□□ 0.88
UBE2D3-216ENST00000503742 PPP2CBP62714 309 aa20.55■□□□□ 0.88
UBE2D3-216ENST00000503742 PPP2CAP67775 309 aa20.55■□□□□ 0.88
UBE2D3-216ENST00000503742 MEF2AQ02078 507 aaPredicted RBP20.55■□□□□ 0.88
UBE2D3-216ENST00000503742 PYCR3Q53H96 274 aa20.55■□□□□ 0.88
UBE2D3-216ENST00000503742 APLFQ8IW19 511 aaPredicted RBP20.55■□□□□ 0.88
UBE2D3-216ENST00000503742 GALNT4Q8N4A0 578 aa20.55■□□□□ 0.88
UBE2D3-216ENST00000503742 C2orf73Q8N5S3 287 aaPredicted RBP20.55■□□□□ 0.88
UBE2D3-216ENST00000503742 TNIP2Q8NFZ5 429 aa20.55■□□□□ 0.88
UBE2D3-216ENST00000503742 STARD8Q92502 1023 aa20.55■□□□□ 0.88
UBE2D3-216ENST00000503742 NELL1Q92832 810 aa20.55■□□□□ 0.88
UBE2D3-216ENST00000503742 UBE2E3Q969T4 207 aa20.55■□□□□ 0.88
UBE2D3-216ENST00000503742 FZD3Q9NPG1 666 aa20.55■□□□□ 0.88
UBE2D3-216ENST00000503742 SCAMP2O15127 329 aaKnown RBP20.54■□□□□ 0.88
UBE2D3-216ENST00000503742 KCNJ13O60928 360 aa20.54■□□□□ 0.88
UBE2D3-216ENST00000503742 FASP25445 335 aa20.54■□□□□ 0.88
UBE2D3-216ENST00000503742 MAT2AP31153 395 aaKnown RBP20.54■□□□□ 0.88
UBE2D3-216ENST00000503742 HSPA13P48723 471 aa20.54■□□□□ 0.88
UBE2D3-216ENST00000503742 POLE2P56282 527 aa20.54■□□□□ 0.88
UBE2D3-216ENST00000503742 IER5LQ5T953 404 aa20.54■□□□□ 0.88
UBE2D3-216ENST00000503742 DUS1LQ6P1R4 473 aaKnown RBP20.54■□□□□ 0.88
UBE2D3-216ENST00000503742 CAMKMTQ7Z624 323 aa20.54■□□□□ 0.88
UBE2D3-216ENST00000503742 ZNF740Q8NDX6 193 aa20.54■□□□□ 0.88
UBE2D3-216ENST00000503742 DNASE1L2Q92874 299 aa20.54■□□□□ 0.88
UBE2D3-216ENST00000503742 SCARF2Q96GP6 870 aaPredicted RBP20.54■□□□□ 0.88
UBE2D3-216ENST00000503742 GBP5Q96PP8 586 aa20.54■□□□□ 0.88
UBE2D3-216ENST00000503742 INSM2Q96T92 566 aaPredicted RBP20.54■□□□□ 0.88
UBE2D3-216ENST00000503742 FAM120CQ9NX05 1096 aaKnown RBP20.54■□□□□ 0.88
UBE2D3-216ENST00000503742 MAPRE3Q9UPY8 281 aa20.54■□□□□ 0.88
UBE2D3-216ENST00000503742 INVSQ9Y283 1065 aa20.54■□□□□ 0.88
UBE2D3-216ENST00000503742 RFXANKO14593 260 aa20.54■□□□□ 0.88
UBE2D3-216ENST00000503742 GSNP06396 782 aa20.54■□□□□ 0.88
UBE2D3-216ENST00000503742 ANXA6P08133 673 aa20.54■□□□□ 0.88
UBE2D3-216ENST00000503742 FCGR1AP12314 374 aa20.54■□□□□ 0.88
UBE2D3-216ENST00000503742 COX7A2P14406 83 aa20.54■□□□□ 0.88
UBE2D3-216ENST00000503742 POU3F3P20264 500 aaPredicted RBP20.54■□□□□ 0.88
UBE2D3-216ENST00000503742 PRKCQQ04759 706 aa20.54■□□□□ 0.88
UBE2D3-216ENST00000503742 MLF2Q15773 248 aaPredicted RBP20.54■□□□□ 0.88
UBE2D3-216ENST00000503742 DUOXA1Q1HG43 343 aa20.54■□□□□ 0.88
UBE2D3-216ENST00000503742 ARMCX6Q7L4S7 300 aa20.54■□□□□ 0.88
UBE2D3-216ENST00000503742 PHACTR4Q8IZ21 702 aa20.54■□□□□ 0.88
UBE2D3-216ENST00000503742 SLC44A3Q8N4M1 653 aa20.54■□□□□ 0.88
UBE2D3-216ENST00000503742 GPR156Q8NFN8 814 aa20.54■□□□□ 0.88
UBE2D3-216ENST00000503742 AURKBQ96GD4 344 aaPredicted RBP20.54■□□□□ 0.88
UBE2D3-216ENST00000503742 MRGPRX1Q96LB2 322 aa20.54■□□□□ 0.88
UBE2D3-216ENST00000503742 ZNF597Q96LX8 424 aa20.54■□□□□ 0.88
UBE2D3-216ENST00000503742 KCNK12Q9HB15 430 aa20.54■□□□□ 0.88
UBE2D3-216ENST00000503742 BTBD3Q9Y2F9 522 aa20.54■□□□□ 0.88
UBE2D3-216ENST00000503742 A0A1W2PPV9 198 aa20.53■□□□□ 0.88
UBE2D3-216ENST00000503742 ELOVL7A1L3X0 281 aa20.53■□□□□ 0.88
UBE2D3-216ENST00000503742 FAM220BPB1ANY3 271 aa20.53■□□□□ 0.88
UBE2D3-216ENST00000503742 LYNP07948 512 aa20.53■□□□□ 0.88
UBE2D3-216ENST00000503742 PIM1P11309 404 aaPredicted RBP20.53■□□□□ 0.88
UBE2D3-216ENST00000503742 TMIGD1Q6UXZ0 262 aa20.53■□□□□ 0.88
UBE2D3-216ENST00000503742 VN1R5Q7Z5H4 357 aa20.53■□□□□ 0.88
UBE2D3-216ENST00000503742 C10orf111Q8N326 155 aa20.53■□□□□ 0.88
UBE2D3-216ENST00000503742 MARVELD2Q8N4S9 558 aa20.53■□□□□ 0.88
UBE2D3-216ENST00000503742 OR52E4Q8NGH9 312 aa20.53■□□□□ 0.88
UBE2D3-216ENST00000503742 PUM2Q8TB72 1066 aaKnown RBP eCLIP20.53■□□□□ 0.88
UBE2D3-216ENST00000503742 SLC29A1Q99808 456 aa20.53■□□□□ 0.88
UBE2D3-216ENST00000503742 PCBD2Q9H0N5 130 aa20.53■□□□□ 0.88
UBE2D3-216ENST00000503742 PELI2Q9HAT8 420 aa20.53■□□□□ 0.88
UBE2D3-216ENST00000503742 TAC3Q9UHF0 121 aa20.53■□□□□ 0.88
UBE2D3-216ENST00000503742 KCNK6Q9Y257 313 aa20.53■□□□□ 0.88
UBE2D3-216ENST00000503742 NCKAP1Q9Y2A7 1128 aa20.53■□□□□ 0.88
UBE2D3-216ENST00000503742 PLEKHM1Q9Y4G2 1056 aa20.53■□□□□ 0.88
UBE2D3-216ENST00000503742 AP4B1Q9Y6B7 739 aa20.53■□□□□ 0.88
UBE2D3-216ENST00000503742 GABRR3A8MPY1 467 aa20.52■□□□□ 0.88
UBE2D3-216ENST00000503742 CACNB4O00305 520 aaPredicted RBP20.52■□□□□ 0.88
UBE2D3-216ENST00000503742 SLC31A1O15431 190 aa20.52■□□□□ 0.88
UBE2D3-216ENST00000503742 LATO43561 262 aa20.52■□□□□ 0.88
UBE2D3-216ENST00000503742 PCDH7O60245 1069 aa20.52■□□□□ 0.88
UBE2D3-216ENST00000503742 HOXC4P09017 264 aaPredicted RBP20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms