RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 STARD3NLO95772 234 aa2.89□□□□□ -1.95
SMC4-227ENST00000497984 ZBTB25P24278 435 aa2.89□□□□□ -1.95
SMC4-227ENST00000497984 CAPGP40121 348 aa2.89□□□□□ -1.95
SMC4-227ENST00000497984 CLCN4P51793 760 aa2.89□□□□□ -1.95
SMC4-227ENST00000497984 MYL7Q01449 175 aa2.89□□□□□ -1.95
SMC4-227ENST00000497984 CAPRIN1Q14444 709 aaKnown RBP2.89□□□□□ -1.95
SMC4-227ENST00000497984 VWC2Q2TAL6 325 aa2.89□□□□□ -1.95
SMC4-227ENST00000497984 C9orf152Q5JTZ5 239 aa2.89□□□□□ -1.95
SMC4-227ENST00000497984 GPR139Q6DWJ6 353 aa2.89□□□□□ -1.95
SMC4-227ENST00000497984 NOTUMQ6P988 496 aa2.89□□□□□ -1.95
SMC4-227ENST00000497984 DET1Q7L5Y6 550 aa2.89□□□□□ -1.95
SMC4-227ENST00000497984 RYBPQ8N488 228 aaPredicted RBP2.89□□□□□ -1.95
SMC4-227ENST00000497984 POGLUT1Q8NBL1 392 aa2.89□□□□□ -1.95
SMC4-227ENST00000497984 OR4K1Q8NGD4 311 aa2.89□□□□□ -1.95
SMC4-227ENST00000497984 CNRIP1Q96F85 164 aaPredicted RBP2.89□□□□□ -1.95
SMC4-227ENST00000497984 CNOT6LQ96LI5 555 aaKnown RBP2.89□□□□□ -1.95
SMC4-227ENST00000497984 NUDT16L1Q9BRJ7 211 aaKnown RBP2.89□□□□□ -1.95
SMC4-227ENST00000497984 KLHL4Q9C0H6 718 aa2.89□□□□□ -1.95
SMC4-227ENST00000497984 SLITRK2Q9H156 845 aa2.89□□□□□ -1.95
SMC4-227ENST00000497984 PARLQ9H300 379 aa2.89□□□□□ -1.95
SMC4-227ENST00000497984 B3GAT2Q9NPZ5 323 aa2.89□□□□□ -1.95
SMC4-227ENST00000497984 B4GALT7Q9UBV7 327 aa2.89□□□□□ -1.95
SMC4-227ENST00000497984 TMED3Q9Y3Q3 217 aa2.89□□□□□ -1.95
SMC4-227ENST00000497984 STYXL1Q9Y6J8 313 aa2.89□□□□□ -1.95
SMC4-227ENST00000497984 RPS6KL1Q9Y6S9 549 aa2.89□□□□□ -1.95
SMC4-227ENST00000497984 TRBC2A0A5B9 178 aa2.88□□□□□ -1.95
SMC4-227ENST00000497984 ZNF840PA6NDX5 716 aa2.88□□□□□ -1.95
SMC4-227ENST00000497984 CASTOR2A6NHX0 329 aa2.88□□□□□ -1.95
SMC4-227ENST00000497984 CLDN4O14493 209 aa2.88□□□□□ -1.95
SMC4-227ENST00000497984 TFECO14948 347 aaPredicted RBP2.88□□□□□ -1.95
SMC4-227ENST00000497984 SNAP91O60641 907 aa2.88□□□□□ -1.95
SMC4-227ENST00000497984 GALR3O60755 368 aaPredicted RBP2.88□□□□□ -1.95
SMC4-227ENST00000497984 POP4O95707 220 aaKnown RBP2.88□□□□□ -1.95
SMC4-227ENST00000497984 DARSP14868 501 aaKnown RBP2.88□□□□□ -1.95
SMC4-227ENST00000497984 OXTRP30559 389 aa2.88□□□□□ -1.95
SMC4-227ENST00000497984 CSE1LP55060 971 aaKnown RBP2.88□□□□□ -1.95
SMC4-227ENST00000497984 CLDN15P56746 228 aa2.88□□□□□ -1.95
SMC4-227ENST00000497984 FCHO2Q0JRZ9 810 aa2.88□□□□□ -1.95
SMC4-227ENST00000497984 TAB1Q15750 504 aa2.88□□□□□ -1.95
SMC4-227ENST00000497984 C3AR1Q16581 482 aa2.88□□□□□ -1.95
SMC4-227ENST00000497984 CRY2Q49AN0 593 aa2.88□□□□□ -1.95
SMC4-227ENST00000497984 BMP2KLQ5H9B9 411 aa2.88□□□□□ -1.95
SMC4-227ENST00000497984 OR4A47Q6IF82 309 aa2.88□□□□□ -1.95
SMC4-227ENST00000497984 FAM131BQ86XD5 332 aa2.88□□□□□ -1.95
SMC4-227ENST00000497984 PHC2Q8IXK0 858 aa2.88□□□□□ -1.95
SMC4-227ENST00000497984 RASGEF1AQ8N9B8 481 aa2.88□□□□□ -1.95
SMC4-227ENST00000497984 NOA1Q8NC60 698 aaKnown RBP2.88□□□□□ -1.95
SMC4-227ENST00000497984 SLC37A3Q8NCC5 494 aa2.88□□□□□ -1.95
SMC4-227ENST00000497984 OR5T2Q8NGG2 359 aa2.88□□□□□ -1.95
SMC4-227ENST00000497984 OR10Q1Q8NGQ4 319 aa2.88□□□□□ -1.95
SMC4-227ENST00000497984 TEKT4Q8WW24 435 aa2.88□□□□□ -1.95
SMC4-227ENST00000497984 FAM71F1Q96KD3 344 aaPredicted RBP2.88□□□□□ -1.95
SMC4-227ENST00000497984 FAM218AQ96MZ4 157 aa2.88□□□□□ -1.95
SMC4-227ENST00000497984 LINC00167Q96N53 147 aa2.88□□□□□ -1.95
SMC4-227ENST00000497984 MUS81Q96NY9 551 aa2.88□□□□□ -1.95
SMC4-227ENST00000497984 SPAG5Q96R06 1193 aa2.88□□□□□ -1.95
SMC4-227ENST00000497984 FEVQ99581 238 aa2.88□□□□□ -1.95
SMC4-227ENST00000497984 HOXD1Q9GZZ0 328 aa2.88□□□□□ -1.95
SMC4-227ENST00000497984 CNOT10Q9H9A5 744 aaKnown RBP2.88□□□□□ -1.95
SMC4-227ENST00000497984 TNFRSF19Q9NS68 423 aa2.88□□□□□ -1.95
SMC4-227ENST00000497984 NYAP2Q9P242 653 aa2.88□□□□□ -1.95
SMC4-227ENST00000497984 POMT2Q9UKY4 750 aa2.88□□□□□ -1.95
SMC4-227ENST00000497984 CHKBQ9Y259 395 aa2.88□□□□□ -1.95
SMC4-227ENST00000497984 WDR83OSQ9Y284 106 aa2.88□□□□□ -1.95
SMC4-227ENST00000497984 TRPV2Q9Y5S1 764 aa2.88□□□□□ -1.95
SMC4-227ENST00000497984 IGHV4-30-2A0A087WSY4 118 aa2.87□□□□□ -1.95
SMC4-227ENST00000497984 TRBV5-5A0A0J9YX44 114 aa2.87□□□□□ -1.95
SMC4-227ENST00000497984 HPP00738 406 aa2.87□□□□□ -1.95
SMC4-227ENST00000497984 ATP5BP06576 529 aaKnown RBP2.87□□□□□ -1.95
SMC4-227ENST00000497984 CSN3P07498 182 aa2.87□□□□□ -1.95
SMC4-227ENST00000497984 PRKAR1AP10644 381 aa2.87□□□□□ -1.95
SMC4-227ENST00000497984 CD22P20273 847 aa2.87□□□□□ -1.95
SMC4-227ENST00000497984 PDHA2P29803 388 aa2.87□□□□□ -1.95
SMC4-227ENST00000497984 LBX1P52954 281 aa2.87□□□□□ -1.95
SMC4-227ENST00000497984 IRX4P78413 519 aa2.87□□□□□ -1.95
SMC4-227ENST00000497984 IFI35P80217 286 aaPredicted RBP2.87□□□□□ -1.95
SMC4-227ENST00000497984 TRAP1Q12931 704 aaKnown RBP2.87□□□□□ -1.95
SMC4-227ENST00000497984 SGCGQ13326 291 aa2.87□□□□□ -1.95
SMC4-227ENST00000497984 VEZF1Q14119 521 aa2.87□□□□□ -1.95
SMC4-227ENST00000497984 TRIM29Q14134 588 aa2.87□□□□□ -1.95
SMC4-227ENST00000497984 BECN1Q14457 450 aa2.87□□□□□ -1.95
SMC4-227ENST00000497984 ARMC4Q5T2S8 1044 aa2.87□□□□□ -1.95
SMC4-227ENST00000497984 TIPARPQ7Z3E1 657 aaKnown RBP2.87□□□□□ -1.95
SMC4-227ENST00000497984 CENPVQ7Z7K6 275 aaPredicted RBP2.87□□□□□ -1.95
SMC4-227ENST00000497984 IQCHQ86VS3 1027 aa2.87□□□□□ -1.95
SMC4-227ENST00000497984 FAM89BQ8N5H3 189 aa2.87□□□□□ -1.95
SMC4-227ENST00000497984 CFAP57Q96MR6 1250 aa2.87□□□□□ -1.95
SMC4-227ENST00000497984 CPNE1Q99829 537 aa2.87□□□□□ -1.95
SMC4-227ENST00000497984 PRRG4Q9BZD6 226 aa2.87□□□□□ -1.95
SMC4-227ENST00000497984 MTHFD2LQ9H903 347 aaPredicted RBP2.87□□□□□ -1.95
SMC4-227ENST00000497984 GSN-AS1Q9NRJ2 163 aa2.87□□□□□ -1.95
SMC4-227ENST00000497984 ZNF256Q9Y2P7 627 aaPredicted RBP2.87□□□□□ -1.95
SMC4-227ENST00000497984 A0A087WWV3 80 aa2.86□□□□□ -1.95
SMC4-227ENST00000497984 TRAV24A0A0B4J272 114 aa2.86□□□□□ -1.95
SMC4-227ENST00000497984 A0A1W2PPK0 400 aa2.86□□□□□ -1.95
SMC4-227ENST00000497984 G3V2L1 256 aa2.86□□□□□ -1.95
SMC4-227ENST00000497984 PHF1O43189 567 aaPredicted RBP2.86□□□□□ -1.95
SMC4-227ENST00000497984 RPL35AP18077 110 aaKnown RBP2.86□□□□□ -1.95
SMC4-227ENST00000497984 IL11P20809 199 aa2.86□□□□□ -1.95
SMC4-227ENST00000497984 CALD1Q05682 793 aaKnown RBP2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms