RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 ONECUT2O95948 504 aa14.64□□□□□ -0.07
NUP50-219ENST00000497960 HSD17B3P37058 310 aa14.64□□□□□ -0.07
NUP50-219ENST00000497960 ARF3P61204 181 aaPredicted RBP14.64□□□□□ -0.07
NUP50-219ENST00000497960 BMPR2Q13873 1038 aa14.64□□□□□ -0.07
NUP50-219ENST00000497960 USP10Q14694 798 aaKnown RBP14.64□□□□□ -0.07
NUP50-219ENST00000497960 MUM1Q2TAK8 710 aa14.64□□□□□ -0.07
NUP50-219ENST00000497960 ZNF425Q6IV72 752 aa14.64□□□□□ -0.07
NUP50-219ENST00000497960 PRMT9Q6P2P2 845 aa14.64□□□□□ -0.07
NUP50-219ENST00000497960 CCDC77Q9BR77 488 aa14.64□□□□□ -0.07
NUP50-219ENST00000497960 MCMBPQ9BTE3 642 aa14.64□□□□□ -0.07
NUP50-219ENST00000497960 TRIM54Q9BYV2 358 aa14.64□□□□□ -0.07
NUP50-219ENST00000497960 PCBD2Q9H0N5 130 aa14.64□□□□□ -0.07
NUP50-219ENST00000497960 CAB39LQ9H9S4 337 aa14.64□□□□□ -0.07
NUP50-219ENST00000497960 CCDC177Q9NQR7 707 aaPredicted RBP14.64□□□□□ -0.07
NUP50-219ENST00000497960 SLC22A11Q9NSA0 550 aa14.64□□□□□ -0.07
NUP50-219ENST00000497960 STOX2Q9P2F5 926 aaPredicted RBP14.64□□□□□ -0.07
NUP50-219ENST00000497960 NXT1Q9UKK6 140 aaKnown RBP14.64□□□□□ -0.07
NUP50-219ENST00000497960 PDE10AQ9Y233 779 aa14.64□□□□□ -0.07
NUP50-219ENST00000497960 MTO1Q9Y2Z2 717 aaKnown RBP14.64□□□□□ -0.07
NUP50-219ENST00000497960 CCDC88CQ9P219 2028 aa14.63□□□□□ -0.07
NUP50-219ENST00000497960 IGKV1-8A0A0C4DH67 115 aa14.63□□□□□ -0.07
NUP50-219ENST00000497960 TXNDC9O14530 226 aa14.63□□□□□ -0.07
NUP50-219ENST00000497960 CNOT3O75175 753 aaKnown RBP14.63□□□□□ -0.07
NUP50-219ENST00000497960 WISP1O95388 367 aa14.63□□□□□ -0.07
NUP50-219ENST00000497960 EZRP15311 586 aaKnown RBP14.63□□□□□ -0.07
NUP50-219ENST00000497960 ITGAXP20702 1163 aa14.63□□□□□ -0.07
NUP50-219ENST00000497960 HRH2P25021 359 aa14.63□□□□□ -0.07
NUP50-219ENST00000497960 OR1D4P47884 311 aa14.63□□□□□ -0.07
NUP50-219ENST00000497960 SERPINB9P50453 376 aa14.63□□□□□ -0.07
NUP50-219ENST00000497960 EMP3P54852 163 aa14.63□□□□□ -0.07
NUP50-219ENST00000497960 POU4F1Q01851 419 aa14.63□□□□□ -0.07
NUP50-219ENST00000497960 RELAQ04206 551 aa14.63□□□□□ -0.07
NUP50-219ENST00000497960 TLE1Q04724 770 aa14.63□□□□□ -0.07
NUP50-219ENST00000497960 ZNF460Q14592 562 aa14.63□□□□□ -0.07
NUP50-219ENST00000497960 LRRC56Q8IYG6 542 aaPredicted RBP14.63□□□□□ -0.07
NUP50-219ENST00000497960 METTL27Q8N6F8 245 aaPredicted RBP14.63□□□□□ -0.07
NUP50-219ENST00000497960 CSNK1A1LQ8N752 337 aa14.63□□□□□ -0.07
NUP50-219ENST00000497960 MYRIPQ8NFW9 859 aa14.63□□□□□ -0.07
NUP50-219ENST00000497960 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.63□□□□□ -0.07
NUP50-219ENST00000497960 COL26A1Q96A83 441 aa14.63□□□□□ -0.07
NUP50-219ENST00000497960 CABS1Q96KC9 395 aa14.63□□□□□ -0.07
NUP50-219ENST00000497960 SLC26A1Q9H2B4 701 aa14.63□□□□□ -0.07
NUP50-219ENST00000497960 WDR54Q9H977 334 aa14.63□□□□□ -0.07
NUP50-219ENST00000497960 ZNF304Q9HCX3 659 aa14.63□□□□□ -0.07
NUP50-219ENST00000497960 ADAMTS6Q9UKP5 1117 aa14.63□□□□□ -0.07
NUP50-219ENST00000497960 CDC14AQ9UNH5 594 aa14.63□□□□□ -0.07
NUP50-219ENST00000497960 ZNF451Q9Y4E5 1061 aa14.63□□□□□ -0.07
NUP50-219ENST00000497960 MAU2Q9Y6X3 613 aa14.63□□□□□ -0.07
NUP50-219ENST00000497960 CCDC151A5D8V7 595 aa14.62□□□□□ -0.07
NUP50-219ENST00000497960 A6NL46 340 aa14.62□□□□□ -0.07
NUP50-219ENST00000497960 H7BY64 318 aa14.62□□□□□ -0.07
NUP50-219ENST00000497960 CEACAM4O75871 244 aa14.62□□□□□ -0.07
NUP50-219ENST00000497960 KRT38O76015 456 aa14.62□□□□□ -0.07
NUP50-219ENST00000497960 SHBGP04278 402 aa14.62□□□□□ -0.07
NUP50-219ENST00000497960 UMODP07911 640 aa14.62□□□□□ -0.07
NUP50-219ENST00000497960 STMN1P16949 149 aa14.62□□□□□ -0.07
NUP50-219ENST00000497960 ZNF37AP17032 561 aaPredicted RBP14.62□□□□□ -0.07
NUP50-219ENST00000497960 CCND1P24385 295 aa14.62□□□□□ -0.07
NUP50-219ENST00000497960 SERPINB8P50452 374 aa14.62□□□□□ -0.07
NUP50-219ENST00000497960 CSRP3P50461 194 aa14.62□□□□□ -0.07
NUP50-219ENST00000497960 PGGT1BP53609 377 aa14.62□□□□□ -0.07
NUP50-219ENST00000497960 TAS2R39P59534 338 aa14.62□□□□□ -0.07
NUP50-219ENST00000497960 TBPL1P62380 186 aa14.62□□□□□ -0.07
NUP50-219ENST00000497960 KCNC4Q03721 635 aa14.62□□□□□ -0.07
NUP50-219ENST00000497960 OCA2Q04671 838 aa14.62□□□□□ -0.07
NUP50-219ENST00000497960 IFFO1Q0D2I5 559 aa14.62□□□□□ -0.07
NUP50-219ENST00000497960 NKG7Q16617 165 aa14.62□□□□□ -0.07
NUP50-219ENST00000497960 PRTGQ2VWP7 1150 aa14.62□□□□□ -0.07
NUP50-219ENST00000497960 MROH9Q5TGP6 573 aa14.62□□□□□ -0.07
NUP50-219ENST00000497960 PRAMEF13Q5VWM6 474 aa14.62□□□□□ -0.07
NUP50-219ENST00000497960 AGTRAPQ6RW13 159 aa14.62□□□□□ -0.07
NUP50-219ENST00000497960 RAPH1Q70E73 1250 aa14.62□□□□□ -0.07
NUP50-219ENST00000497960 CLEC1AQ8NC01 280 aa14.62□□□□□ -0.07
NUP50-219ENST00000497960 DCAKDQ8WVC6 231 aa14.62□□□□□ -0.07
NUP50-219ENST00000497960 NACC2Q96BF6 587 aa14.62□□□□□ -0.07
NUP50-219ENST00000497960 ALKBH8Q96BT7 664 aaKnown RBP14.62□□□□□ -0.07
NUP50-219ENST00000497960 PRAP1Q96NZ9 151 aa14.62□□□□□ -0.07
NUP50-219ENST00000497960 OR2A5Q96R48 311 aa14.62□□□□□ -0.07
NUP50-219ENST00000497960 ATG10Q9H0Y0 220 aa14.62□□□□□ -0.07
NUP50-219ENST00000497960 EPN3Q9H201 632 aa14.62□□□□□ -0.07
NUP50-219ENST00000497960 POPDC3Q9HBV1 291 aa14.62□□□□□ -0.07
NUP50-219ENST00000497960 GPAMQ9HCL2 828 aa14.62□□□□□ -0.07
NUP50-219ENST00000497960 MLXIPLQ9NP71 852 aa14.62□□□□□ -0.07
NUP50-219ENST00000497960 TMEM184CQ9NVA4 438 aa14.62□□□□□ -0.07
NUP50-219ENST00000497960 P4HTMQ9NXG6 502 aa14.62□□□□□ -0.07
NUP50-219ENST00000497960 GPR83Q9NYM4 423 aa14.62□□□□□ -0.07
NUP50-219ENST00000497960 PSMC3IPQ9P2W1 217 aaPredicted RBP14.62□□□□□ -0.07
NUP50-219ENST00000497960 ZNF180Q9UJW8 692 aa14.62□□□□□ -0.07
NUP50-219ENST00000497960 PCDHGB7Q9Y5F8 929 aa14.62□□□□□ -0.07
NUP50-219ENST00000497960 RP1L1Q8IWN7 2480 aaPredicted RBP14.61□□□□□ -0.07
NUP50-219ENST00000497960 SMIM23A6NLE4 172 aa14.61□□□□□ -0.07
NUP50-219ENST00000497960 HAT1O14929 419 aa14.61□□□□□ -0.07
NUP50-219ENST00000497960 PRPF4O43172 522 aaKnown RBP eCLIP14.61□□□□□ -0.074e-7■■■■□ 23.9
NUP50-219ENST00000497960 PHGDHO43175 533 aaKnown RBP14.61□□□□□ -0.07
NUP50-219ENST00000497960 CTIFO43310 598 aaKnown RBP14.61□□□□□ -0.07
NUP50-219ENST00000497960 KLHL41O60662 606 aa14.61□□□□□ -0.07
NUP50-219ENST00000497960 TSPAN12O95859 305 aa14.61□□□□□ -0.07
NUP50-219ENST00000497960 PDGFAP04085 211 aa14.61□□□□□ -0.07
NUP50-219ENST00000497960 MMP11P24347 488 aa14.61□□□□□ -0.07
NUP50-219ENST00000497960 CNTFP26441 200 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms