RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 SPRY1O43609 319 aaPredicted RBP9.05□□□□□ -0.96
SMARCAL1-213ENST00000496037 MFSD11O43934 449 aa9.05□□□□□ -0.96
SMARCAL1-213ENST00000496037 NME2P1O60361 137 aa9.05□□□□□ -0.96
SMARCAL1-213ENST00000496037 NEURL1O76050 574 aa9.05□□□□□ -0.96
SMARCAL1-213ENST00000496037 SEC24DO94855 1032 aaPredicted RBP9.05□□□□□ -0.96
SMARCAL1-213ENST00000496037 SNUPNO95149 360 aaKnown RBP9.05□□□□□ -0.96
SMARCAL1-213ENST00000496037 GOSR1O95249 250 aa9.05□□□□□ -0.96
SMARCAL1-213ENST00000496037 NME2P22392 152 aa9.05□□□□□ -0.96
SMARCAL1-213ENST00000496037 ACVR2AP27037 513 aa9.05□□□□□ -0.96
SMARCAL1-213ENST00000496037 CD151P48509 253 aa9.05□□□□□ -0.96
SMARCAL1-213ENST00000496037 GALNT2Q10471 571 aa9.05□□□□□ -0.96
SMARCAL1-213ENST00000496037 PKP1Q13835 747 aa9.05□□□□□ -0.96
SMARCAL1-213ENST00000496037 BOP1Q14137 746 aaKnown RBP9.05□□□□□ -0.96
SMARCAL1-213ENST00000496037 KIR2DS3Q14952 304 aa9.05□□□□□ -0.96
SMARCAL1-213ENST00000496037 IFI16Q16666 785 aaKnown RBP9.05□□□□□ -0.96
SMARCAL1-213ENST00000496037 PLAG1Q6DJT9 500 aa9.05□□□□□ -0.96
SMARCAL1-213ENST00000496037 B3GNT6Q6ZMB0 384 aa9.05□□□□□ -0.96
SMARCAL1-213ENST00000496037 LHFPL2Q6ZUX7 228 aa9.05□□□□□ -0.96
SMARCAL1-213ENST00000496037 CYP4V2Q6ZWL3 525 aaPredicted RBP9.05□□□□□ -0.96
SMARCAL1-213ENST00000496037 CRLF3Q8IUI8 442 aa9.05□□□□□ -0.96
SMARCAL1-213ENST00000496037 FMR1NBQ8N0W7 255 aaPredicted RBP9.05□□□□□ -0.96
SMARCAL1-213ENST00000496037 SLC5A8Q8N695 610 aa9.05□□□□□ -0.96
SMARCAL1-213ENST00000496037 FLVCR1-AS1Q8TAF5 88 aa9.05□□□□□ -0.96
SMARCAL1-213ENST00000496037 DTX3LQ8TDB6 740 aa9.05□□□□□ -0.96
SMARCAL1-213ENST00000496037 NAT14Q8WUY8 206 aa9.05□□□□□ -0.96
SMARCAL1-213ENST00000496037 METTL21AQ8WXB1 218 aa9.05□□□□□ -0.96
SMARCAL1-213ENST00000496037 TFGQ92734 400 aaPredicted RBP9.05□□□□□ -0.96
SMARCAL1-213ENST00000496037 PIGTQ969N2 578 aa9.05□□□□□ -0.96
SMARCAL1-213ENST00000496037 DCUN1D1Q96GG9 259 aa9.05□□□□□ -0.96
SMARCAL1-213ENST00000496037 IMMP1LQ96LU5 166 aa9.05□□□□□ -0.96
SMARCAL1-213ENST00000496037 TRIB3Q96RU7 358 aa9.05□□□□□ -0.96
SMARCAL1-213ENST00000496037 PIP5K1AQ99755 562 aa9.05□□□□□ -0.96
SMARCAL1-213ENST00000496037 AMBRA1Q9C0C7 1298 aa9.05□□□□□ -0.96
SMARCAL1-213ENST00000496037 THAP2Q9H0W7 228 aa9.05□□□□□ -0.96
SMARCAL1-213ENST00000496037 COG4Q9H9E3 785 aa9.05□□□□□ -0.96
SMARCAL1-213ENST00000496037 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.05□□□□□ -0.96
SMARCAL1-213ENST00000496037 TRPC4Q9UBN4 977 aa9.05□□□□□ -0.96
SMARCAL1-213ENST00000496037 B4GALT7Q9UBV7 327 aa9.05□□□□□ -0.96
SMARCAL1-213ENST00000496037 Q9UFV3 132 aa9.05□□□□□ -0.96
SMARCAL1-213ENST00000496037 KLHL20Q9Y2M5 609 aa9.05□□□□□ -0.96
SMARCAL1-213ENST00000496037 GPC6Q9Y625 555 aaPredicted RBP9.05□□□□□ -0.96
SMARCAL1-213ENST00000496037 FAM169AQ9Y6X4 670 aa9.05□□□□□ -0.96
SMARCAL1-213ENST00000496037 FITM1A5D6W6 292 aa9.04□□□□□ -0.96
SMARCAL1-213ENST00000496037 TUBAL3A6NHL2 446 aa9.04□□□□□ -0.96
SMARCAL1-213ENST00000496037 FAM47E-STBD1D6RA91 191 aa9.04□□□□□ -0.96
SMARCAL1-213ENST00000496037 CLDN4O14493 209 aa9.04□□□□□ -0.96
SMARCAL1-213ENST00000496037 KCNAB3O43448 404 aa9.04□□□□□ -0.96
SMARCAL1-213ENST00000496037 HS6ST1O60243 411 aa9.04□□□□□ -0.96
SMARCAL1-213ENST00000496037 SUSD5O60279 629 aa9.04□□□□□ -0.96
SMARCAL1-213ENST00000496037 KDM1AO60341 852 aa9.04□□□□□ -0.96
SMARCAL1-213ENST00000496037 DNAJB6O75190 326 aa9.04□□□□□ -0.96
SMARCAL1-213ENST00000496037 PGRP06401 933 aa9.04□□□□□ -0.96
SMARCAL1-213ENST00000496037 C8orf89P0DMQ9 161 aa9.04□□□□□ -0.96
SMARCAL1-213ENST00000496037 RALBP11234 206 aa9.04□□□□□ -0.96
SMARCAL1-213ENST00000496037 EPXP11678 715 aa9.04□□□□□ -0.96
SMARCAL1-213ENST00000496037 CCNCP24863 283 aa9.04□□□□□ -0.96
SMARCAL1-213ENST00000496037 MAP2K3P46734 347 aa9.04□□□□□ -0.96
SMARCAL1-213ENST00000496037 CLCQ05315 142 aa9.04□□□□□ -0.96
SMARCAL1-213ENST00000496037 EMC4Q5J8M3 183 aa9.04□□□□□ -0.96
SMARCAL1-213ENST00000496037 CCDC122Q5T0U0 273 aa9.04□□□□□ -0.96
SMARCAL1-213ENST00000496037 KAZNQ674X7 775 aa9.04□□□□□ -0.96
SMARCAL1-213ENST00000496037 KIAA0930Q6ICG6 404 aaPredicted RBP9.04□□□□□ -0.96
SMARCAL1-213ENST00000496037 DPY19L2P1Q6NXN4 242 aa9.04□□□□□ -0.96
SMARCAL1-213ENST00000496037 PAOXQ6QHF9 649 aa9.04□□□□□ -0.96
SMARCAL1-213ENST00000496037 VHLLQ6RSH7 139 aa9.04□□□□□ -0.96
SMARCAL1-213ENST00000496037 LIX1LQ8IVB5 337 aa9.04□□□□□ -0.96
SMARCAL1-213ENST00000496037 ANP32BQ92688 251 aaKnown RBP9.04□□□□□ -0.96
SMARCAL1-213ENST00000496037 FATE1Q969F0 183 aa9.04□□□□□ -0.96
SMARCAL1-213ENST00000496037 TMEM125Q96AQ2 219 aa9.04□□□□□ -0.96
SMARCAL1-213ENST00000496037 PERPQ96FX8 193 aa9.04□□□□□ -0.96
SMARCAL1-213ENST00000496037 CLUHP3Q96NS8 147 aa9.04□□□□□ -0.96
SMARCAL1-213ENST00000496037 TTYH2Q9BSA4 534 aa9.04□□□□□ -0.96
SMARCAL1-213ENST00000496037 OR52A5Q9H2C5 316 aa9.04□□□□□ -0.96
SMARCAL1-213ENST00000496037 NDST4Q9H3R1 872 aa9.04□□□□□ -0.96
SMARCAL1-213ENST00000496037 PARVAQ9NVD7 372 aa9.04□□□□□ -0.96
SMARCAL1-213ENST00000496037 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.04□□□□□ -0.96
SMARCAL1-213ENST00000496037 TDRKHQ9Y2W6 561 aaKnown RBP9.04□□□□□ -0.96
SMARCAL1-213ENST00000496037 SPO11Q9Y5K1 396 aa9.04□□□□□ -0.96
SMARCAL1-213ENST00000496037 NPIPA2E9PIF3 369 aa9.03□□□□□ -0.96
SMARCAL1-213ENST00000496037 NPIPA3F8WFD2 350 aa9.03□□□□□ -0.96
SMARCAL1-213ENST00000496037 SYT5O00445 386 aa9.03□□□□□ -0.96
SMARCAL1-213ENST00000496037 FFAR3O14843 346 aa9.03□□□□□ -0.96
SMARCAL1-213ENST00000496037 GPR42O15529 346 aa9.03□□□□□ -0.96
SMARCAL1-213ENST00000496037 PDE9AO76083 593 aa9.03□□□□□ -0.96
SMARCAL1-213ENST00000496037 CNOT4O95628 575 aaKnown RBP9.03□□□□□ -0.96
SMARCAL1-213ENST00000496037 GLI4P10075 376 aa9.03□□□□□ -0.96
SMARCAL1-213ENST00000496037 ERVK-10P10266 1014 aa9.03□□□□□ -0.96
SMARCAL1-213ENST00000496037 RFC3P40938 356 aa9.03□□□□□ -0.96
SMARCAL1-213ENST00000496037 GRIA3P42263 894 aa9.03□□□□□ -0.96
SMARCAL1-213ENST00000496037 PRLHRP49683 370 aa9.03□□□□□ -0.96
SMARCAL1-213ENST00000496037 VSX2P58304 361 aaPredicted RBP9.03□□□□□ -0.96
SMARCAL1-213ENST00000496037 TAS2R50P59544 299 aa9.03□□□□□ -0.96
SMARCAL1-213ENST00000496037 TBX2Q13207 712 aaPredicted RBP9.03□□□□□ -0.96
SMARCAL1-213ENST00000496037 POU4F3Q15319 338 aa9.03□□□□□ -0.96
SMARCAL1-213ENST00000496037 MUM1Q2TAK8 710 aa9.03□□□□□ -0.96
SMARCAL1-213ENST00000496037 KRTAP24-1Q3LI83 254 aa9.03□□□□□ -0.96
SMARCAL1-213ENST00000496037 CMPK2Q5EBM0 449 aa9.03□□□□□ -0.96
SMARCAL1-213ENST00000496037 FKBP15Q5T1M5 1219 aa9.03□□□□□ -0.96
SMARCAL1-213ENST00000496037 HEPHL1Q6MZM0 1159 aa9.03□□□□□ -0.96
SMARCAL1-213ENST00000496037 H3F3CQ6NXT2 135 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms