RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 HCN1O60741 890 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 MITFO75030 526 aaPredicted RBP4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 WBP4O75554 376 aaKnown RBP4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 GPX5O75715 221 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 ATP6AP2O75787 350 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 RECQL5O94762 991 aaPredicted RBP4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 SCELO95171 688 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 BPNT1O95861 308 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 PGK1P00558 417 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 H2AFB1P0C5Y9 115 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 H2AFB2P0C5Z0 115 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 ACSM4P0C7M7 580 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 ARP10275 920 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 PDGFRAP16234 1089 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 SYN1P17600 705 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 IL1RNP18510 177 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 CYP2F1P24903 491 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 HLA-FP30511 346 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 HOXA13P31271 388 aaPredicted RBP4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 MAP2K3P46734 347 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 RAB13P51153 203 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 HK3P52790 923 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 DCDC1P59894 354 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 PSPHP78330 225 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 HSF2Q03933 536 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 RELQ04864 619 aaPredicted RBP4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 GPR68Q15743 365 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 ZNF124Q15973 351 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 GRIK4Q16099 956 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 SMN1Q16637 294 aaKnown RBP4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 ZNF800Q2TB10 664 aaPredicted RBP eCLIP4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 WSCD2Q2TBF2 565 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 IQCCQ4KMZ1 466 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 FLYWCH1Q4VC44 716 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 PABPC1L2AQ5JQF8 200 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 PAGE3Q5JUK9 113 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 FAM160B1Q5W0V3 765 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 BICRALQ6AI39 1079 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 SHQ1Q6PI26 577 aaKnown RBP4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 FAM131AQ6UXB0 335 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 GDPGP1Q6ZNW5 385 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 ARHGAP36Q6ZRI8 547 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 BEND4Q6ZU67 534 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 AHSA2Q719I0 299 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 LRRC8DQ7L1W4 858 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 BNIPLQ7Z465 357 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 TMEM179BQ7Z7N9 219 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 ASPGQ86U10 573 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 CYP4Z1Q86W10 505 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 NIM1KQ8IY84 436 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 CHPFQ8IZ52 775 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 ABI1Q8IZP0 508 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 DPP10Q8N608 796 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 ARL6IP6Q8N6S5 226 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 LRRC17Q8N6Y2 441 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 RDM1Q8NG50 284 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 ZNF675Q8TD23 568 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 GPR151Q8TDV0 419 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 THAP3Q8WTV1 239 aaPredicted RBP4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 RXFP2Q8WXD0 754 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 ASB12Q8WXK4 309 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 WBP1Q96G27 269 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 C3orf30Q96M34 536 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 ADPGKQ9BRR6 497 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 APOL5Q9BWW9 433 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 BCL2L14Q9BZR8 327 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 RIBC2Q9H4K1 309 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 RNF167Q9H6Y7 350 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 SYNDIG1Q9H7V2 258 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 UCK1Q9HA47 277 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 NMUR1Q9HB89 426 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 DDX4Q9NQI0 724 aaKnown RBP4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 BIN3Q9NQY0 253 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 CISHQ9NSE2 258 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 MCUBQ9NWR8 336 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 SDHAF2Q9NX18 166 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 KCTD5Q9NXV2 234 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 MARK1Q9P0L2 795 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 CYTH4Q9UIA0 394 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 OGDHLQ9ULD0 1010 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 TMX2Q9Y320 296 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 CMAHPQ9Y471 501 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 GPR45Q9Y5Y3 372 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 STYXL1Q9Y6J8 313 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 NAV1Q8NEY1 1877 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 IQCMA0A1B0GVH7 501 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 SLC22A23A1A5C7 686 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 ASPDHA6ND91 283 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 FABP12A6NFH5 140 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 CLCA1A8K7I4 914 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 A8MT66 165 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 E9PAM4 449 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 E9PQ18 207 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 DNASE2O00115 360 aaPredicted RBP4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 IFRD1O00458 451 aaPredicted RBP4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 PCDH17O14917 1159 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 HNRNPDLO14979 420 aaKnown RBP4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 SYN3O14994 580 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 CD3EAPO15446 510 aaKnown RBP4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 SLC22A3O75751 556 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms