RNA–Protein interactions for RNA: ENST00000488155.1

NIPAL3-207, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 931 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-207ENST00000488155 MRPS2Q9Y399 296 aaKnown RBP10.75□□□□□ -0.69
NIPAL3-207ENST00000488155 COMMD10Q9Y6G5 202 aa10.75□□□□□ -0.69
NIPAL3-207ENST00000488155 CROCCQ5TZA2 2017 aa10.74□□□□□ -0.69
NIPAL3-207ENST00000488155 FEZF1A0PJY2 475 aa10.74□□□□□ -0.69
NIPAL3-207ENST00000488155 IDSB3KWA1 339 aa10.74□□□□□ -0.69
NIPAL3-207ENST00000488155 FOXS1O43638 330 aa10.74□□□□□ -0.69
NIPAL3-207ENST00000488155 KLHL41O60662 606 aa10.74□□□□□ -0.69
NIPAL3-207ENST00000488155 JRKO75564 520 aa10.74□□□□□ -0.69
NIPAL3-207ENST00000488155 KLHL18O94889 574 aa10.74□□□□□ -0.69
NIPAL3-207ENST00000488155 AHSGP02765 367 aa10.74□□□□□ -0.69
NIPAL3-207ENST00000488155 HEXBP07686 556 aa10.74□□□□□ -0.69
NIPAL3-207ENST00000488155 CELA2AP08217 269 aa10.74□□□□□ -0.69
NIPAL3-207ENST00000488155 GP1BBP13224 206 aa10.74□□□□□ -0.69
NIPAL3-207ENST00000488155 ACPPP15309 386 aa10.74□□□□□ -0.69
NIPAL3-207ENST00000488155 ELK3P41970 407 aa10.74□□□□□ -0.69
NIPAL3-207ENST00000488155 SKIV2L2P42285 1042 aaKnown RBP10.74□□□□□ -0.69
NIPAL3-207ENST00000488155 RGS4P49798 205 aa10.74□□□□□ -0.69
NIPAL3-207ENST00000488155 ABATP80404 500 aa10.74□□□□□ -0.69
NIPAL3-207ENST00000488155 NAE1Q13564 534 aa10.74□□□□□ -0.69
NIPAL3-207ENST00000488155 SPANXN3Q5MJ09 141 aa10.74□□□□□ -0.69
NIPAL3-207ENST00000488155 UGT3A1Q6NUS8 523 aa10.74□□□□□ -0.69
NIPAL3-207ENST00000488155 Q6ZS92 163 aa10.74□□□□□ -0.69
NIPAL3-207ENST00000488155 PCGF5Q86SE9 256 aa10.74□□□□□ -0.69
NIPAL3-207ENST00000488155 ANKMY2Q8IV38 441 aa10.74□□□□□ -0.69
NIPAL3-207ENST00000488155 PALM2Q8IXS6 379 aa10.74□□□□□ -0.69
NIPAL3-207ENST00000488155 AMER3Q8N944 861 aa10.74□□□□□ -0.69
NIPAL3-207ENST00000488155 GPATCH11Q8N954 259 aa10.74□□□□□ -0.69
NIPAL3-207ENST00000488155 ZCCHC10Q8TBK6 192 aa10.74□□□□□ -0.69
NIPAL3-207ENST00000488155 DNAJB14Q8TBM8 379 aa10.74□□□□□ -0.69
NIPAL3-207ENST00000488155 MCOLN3Q8TDD5 553 aa10.74□□□□□ -0.69
NIPAL3-207ENST00000488155 LINGO1Q96FE5 620 aa10.74□□□□□ -0.69
NIPAL3-207ENST00000488155 CERS2Q96G23 380 aa10.74□□□□□ -0.69
NIPAL3-207ENST00000488155 VPS50Q96JG6 964 aa10.74□□□□□ -0.69
NIPAL3-207ENST00000488155 PSMG3-AS1Q96PY0 264 aa10.74□□□□□ -0.69
NIPAL3-207ENST00000488155 TRIM51Q9BSJ1 452 aa10.74□□□□□ -0.69
NIPAL3-207ENST00000488155 TRIM31Q9BZY9 425 aa10.74□□□□□ -0.69
NIPAL3-207ENST00000488155 LHPPQ9H008 270 aa10.74□□□□□ -0.69
NIPAL3-207ENST00000488155 DRC3Q9H069 523 aa10.74□□□□□ -0.69
NIPAL3-207ENST00000488155 CCDC177Q9NQR7 707 aaPredicted RBP10.74□□□□□ -0.69
NIPAL3-207ENST00000488155 TAS2R13Q9NYV9 303 aa10.74□□□□□ -0.69
NIPAL3-207ENST00000488155 NOVA2Q9UNW9 492 aaKnown RBP10.74□□□□□ -0.69
NIPAL3-207ENST00000488155 PDE10AQ9Y233 779 aa10.74□□□□□ -0.69
NIPAL3-207ENST00000488155 COPG1Q9Y678 874 aaKnown RBP10.74□□□□□ -0.69
NIPAL3-207ENST00000488155 IGLV3-12A0A075B6K2 115 aa10.73□□□□□ -0.69
NIPAL3-207ENST00000488155 NSG1A0A0A6YYJ2 146 aa10.73□□□□□ -0.69
NIPAL3-207ENST00000488155 A1L4Q6 167 aa10.73□□□□□ -0.69
NIPAL3-207ENST00000488155 CES2O00748 559 aa10.73□□□□□ -0.69
NIPAL3-207ENST00000488155 HPP00738 406 aa10.73□□□□□ -0.69
NIPAL3-207ENST00000488155 F10P00742 488 aa10.73□□□□□ -0.69
NIPAL3-207ENST00000488155 UQCRHP07919 91 aa10.73□□□□□ -0.69
NIPAL3-207ENST00000488155 COX6A1P12074 109 aa10.73□□□□□ -0.69
NIPAL3-207ENST00000488155 EZRP15311 586 aaKnown RBP10.73□□□□□ -0.69
NIPAL3-207ENST00000488155 TCP1P17987 556 aaKnown RBP10.73□□□□□ -0.69
NIPAL3-207ENST00000488155 IL1RNP18510 177 aa10.73□□□□□ -0.69
NIPAL3-207ENST00000488155 SAT1P21673 171 aa10.73□□□□□ -0.69
NIPAL3-207ENST00000488155 CXCR2P25025 360 aa10.73□□□□□ -0.69
NIPAL3-207ENST00000488155 IVDP26440 423 aa10.73□□□□□ -0.69
NIPAL3-207ENST00000488155 GNG11P61952 73 aa10.73□□□□□ -0.69
NIPAL3-207ENST00000488155 DSG2Q14126 1118 aa10.73□□□□□ -0.69
NIPAL3-207ENST00000488155 PHKG1Q16816 387 aa10.73□□□□□ -0.69
NIPAL3-207ENST00000488155 MFSD4BQ5TF39 518 aa10.73□□□□□ -0.69
NIPAL3-207ENST00000488155 ATG9BQ674R7 924 aa10.73□□□□□ -0.69
NIPAL3-207ENST00000488155 TRMT10BQ6PF06 316 aaKnown RBP10.73□□□□□ -0.69
NIPAL3-207ENST00000488155 AGTRAPQ6RW13 159 aa10.73□□□□□ -0.69
NIPAL3-207ENST00000488155 PRSS41Q7RTY9 318 aa10.73□□□□□ -0.69
NIPAL3-207ENST00000488155 MYO1HQ8N1T3 1032 aa10.73□□□□□ -0.69
NIPAL3-207ENST00000488155 SIRT6Q8N6T7 355 aa10.73□□□□□ -0.69
NIPAL3-207ENST00000488155 CATSPER1Q8NEC5 780 aa10.73□□□□□ -0.69
NIPAL3-207ENST00000488155 OR9A4Q8NGU2 314 aa10.73□□□□□ -0.69
NIPAL3-207ENST00000488155 BRIX1Q8TDN6 353 aaKnown RBP10.73□□□□□ -0.69
NIPAL3-207ENST00000488155 NACC2Q96BF6 587 aa10.73□□□□□ -0.69
NIPAL3-207ENST00000488155 CCDC138Q96M89 665 aa10.73□□□□□ -0.69
NIPAL3-207ENST00000488155 WDR77Q9BQA1 342 aaPredicted RBP10.73□□□□□ -0.69
NIPAL3-207ENST00000488155 EPS8L2Q9H6S3 715 aa10.73□□□□□ -0.69
NIPAL3-207ENST00000488155 PLAC1Q9HBJ0 212 aa10.73□□□□□ -0.69
NIPAL3-207ENST00000488155 TMEM184CQ9NVA4 438 aa10.73□□□□□ -0.69
NIPAL3-207ENST00000488155 PLA2G3Q9NZ20 509 aa10.73□□□□□ -0.69
NIPAL3-207ENST00000488155 PTGFRNQ9P2B2 879 aa10.73□□□□□ -0.69
NIPAL3-207ENST00000488155 MKL2Q9ULH7 1088 aa10.73□□□□□ -0.69
NIPAL3-207ENST00000488155 PCDHGA10Q9Y5H3 936 aa10.73□□□□□ -0.69
NIPAL3-207ENST00000488155 IGHV3-20A0A0C4DH32 117 aa10.72□□□□□ -0.69
NIPAL3-207ENST00000488155 OR2W5A6NFC9 320 aa10.72□□□□□ -0.69
NIPAL3-207ENST00000488155 ANKUB1A6NFN9 424 aa10.72□□□□□ -0.69
NIPAL3-207ENST00000488155 EIF3FO00303 357 aaPredicted RBP10.72□□□□□ -0.69
NIPAL3-207ENST00000488155 TXNDC9O14530 226 aa10.72□□□□□ -0.69
NIPAL3-207ENST00000488155 TTI1O43156 1089 aa10.72□□□□□ -0.69
NIPAL3-207ENST00000488155 PRPF4O43172 522 aaKnown RBP eCLIP10.72□□□□□ -0.69
NIPAL3-207ENST00000488155 LCMT2O60294 686 aaKnown RBP10.72□□□□□ -0.69
NIPAL3-207ENST00000488155 CBX6O95503 412 aa10.72□□□□□ -0.69
NIPAL3-207ENST00000488155 TTC4O95801 387 aa10.72□□□□□ -0.69
NIPAL3-207ENST00000488155 C8GP07360 202 aa10.72□□□□□ -0.69
NIPAL3-207ENST00000488155 HIST1H2AGP0C0S8 130 aaPredicted RBP10.72□□□□□ -0.69
NIPAL3-207ENST00000488155 CDH1P12830 882 aa10.72□□□□□ -0.69
NIPAL3-207ENST00000488155 HIST1H2ADP20671 130 aa10.72□□□□□ -0.69
NIPAL3-207ENST00000488155 VARSP26640 1264 aaKnown RBP10.72□□□□□ -0.69
NIPAL3-207ENST00000488155 SLC26A3P40879 764 aa10.72□□□□□ -0.69
NIPAL3-207ENST00000488155 AVPR1BP47901 424 aa10.72□□□□□ -0.69
NIPAL3-207ENST00000488155 EFNA3P52797 238 aa10.72□□□□□ -0.69
NIPAL3-207ENST00000488155 ITGA8P53708 1063 aa10.72□□□□□ -0.69
NIPAL3-207ENST00000488155 EMP3P54852 163 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms