RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 TAZQ16635 292 aa3.34□□□□□ -1.87
HMGB1P36-201ENST00000487709 ALDH1L2Q3SY69 923 aa3.34□□□□□ -1.87
HMGB1P36-201ENST00000487709 XKR6Q5GH73 641 aa3.34□□□□□ -1.87
HMGB1P36-201ENST00000487709 FIP1L1Q6UN15 594 aaKnown RBP3.34□□□□□ -1.87
HMGB1P36-201ENST00000487709 PRSS55Q6UWB4 352 aaPredicted RBP3.34□□□□□ -1.87
HMGB1P36-201ENST00000487709 CROCCP3Q8IVE0 287 aa3.34□□□□□ -1.87
HMGB1P36-201ENST00000487709 ZNF485Q8NCK3 441 aa3.34□□□□□ -1.87
HMGB1P36-201ENST00000487709 OR2T11Q8NH01 316 aa3.34□□□□□ -1.87
HMGB1P36-201ENST00000487709 OR4C3Q8NH37 302 aa3.34□□□□□ -1.87
HMGB1P36-201ENST00000487709 OR6S1Q8NH40 331 aa3.34□□□□□ -1.87
HMGB1P36-201ENST00000487709 PSMA8Q8TAA3 256 aa3.34□□□□□ -1.87
HMGB1P36-201ENST00000487709 MAPK15Q8TD08 544 aa3.34□□□□□ -1.87
HMGB1P36-201ENST00000487709 ZNRF4Q8WWF5 429 aa3.34□□□□□ -1.87
HMGB1P36-201ENST00000487709 ZNF501Q96CX3 271 aaPredicted RBP3.34□□□□□ -1.87
HMGB1P36-201ENST00000487709 LGALS12Q96DT0 336 aa3.34□□□□□ -1.87
HMGB1P36-201ENST00000487709 SENP5Q96HI0 755 aaPredicted RBP3.34□□□□□ -1.87
HMGB1P36-201ENST00000487709 TRIM51Q9BSJ1 452 aa3.34□□□□□ -1.87
HMGB1P36-201ENST00000487709 DNAI2Q9GZS0 605 aa3.34□□□□□ -1.87
HMGB1P36-201ENST00000487709 WDR13Q9H1Z4 485 aa3.34□□□□□ -1.87
HMGB1P36-201ENST00000487709 RIMS4Q9H426 269 aaPredicted RBP3.34□□□□□ -1.87
HMGB1P36-201ENST00000487709 GMEB2Q9UKD1 530 aa3.34□□□□□ -1.87
HMGB1P36-201ENST00000487709 PA2G4Q9UQ80 394 aaKnown RBP3.34□□□□□ -1.87
HMGB1P36-201ENST00000487709 ZFP37Q9Y6Q3 630 aaPredicted RBP3.34□□□□□ -1.87
HMGB1P36-201ENST00000487709 SNED1Q8TER0 1413 aa3.34□□□□□ -1.88
HMGB1P36-201ENST00000487709 C2orf92A0A1B0GVN3 265 aa3.33□□□□□ -1.88
HMGB1P36-201ENST00000487709 C17orf105B2RV13 164 aa3.33□□□□□ -1.88
HMGB1P36-201ENST00000487709 C2CD4DB7Z1M9 353 aa3.33□□□□□ -1.88
HMGB1P36-201ENST00000487709 NPIPA3F8WFD2 350 aa3.33□□□□□ -1.88
HMGB1P36-201ENST00000487709 SLC33A1O00400 549 aaPredicted RBP3.33□□□□□ -1.88
HMGB1P36-201ENST00000487709 SLC30A4O14863 429 aa3.33□□□□□ -1.88
HMGB1P36-201ENST00000487709 TEX28O15482 410 aa3.33□□□□□ -1.88
HMGB1P36-201ENST00000487709 NXPH2O95156 264 aa3.33□□□□□ -1.88
HMGB1P36-201ENST00000487709 RAF1P04049 648 aa3.33□□□□□ -1.88
HMGB1P36-201ENST00000487709 ATP1B1P05026 303 aa3.33□□□□□ -1.88
HMGB1P36-201ENST00000487709 SERPING1P05155 500 aa3.33□□□□□ -1.88
HMGB1P36-201ENST00000487709 YES1P07947 543 aa3.33□□□□□ -1.88
HMGB1P36-201ENST00000487709 PATE4P0C8F1 98 aa3.33□□□□□ -1.88
HMGB1P36-201ENST00000487709 CFC1BP0CG36 223 aa3.33□□□□□ -1.88
HMGB1P36-201ENST00000487709 CFC1P0CG37 223 aa3.33□□□□□ -1.88
HMGB1P36-201ENST00000487709 TRIM49P0CI25 452 aa3.33□□□□□ -1.88
HMGB1P36-201ENST00000487709 TRIM49CP0CI26 452 aa3.33□□□□□ -1.88
HMGB1P36-201ENST00000487709 RPL35AP18077 110 aaKnown RBP3.33□□□□□ -1.88
HMGB1P36-201ENST00000487709 AADACP22760 399 aa3.33□□□□□ -1.88
HMGB1P36-201ENST00000487709 PAX9P55771 341 aa3.33□□□□□ -1.88
HMGB1P36-201ENST00000487709 CLDN15P56746 228 aa3.33□□□□□ -1.88
HMGB1P36-201ENST00000487709 GSDMDP57764 484 aa3.33□□□□□ -1.88
HMGB1P36-201ENST00000487709 YWHAHQ04917 246 aaPredicted RBP3.33□□□□□ -1.88
HMGB1P36-201ENST00000487709 CETN1Q12798 172 aa3.33□□□□□ -1.88
HMGB1P36-201ENST00000487709 PPA1Q15181 289 aa3.33□□□□□ -1.88
HMGB1P36-201ENST00000487709 ZNF74Q16587 644 aa3.33□□□□□ -1.88
HMGB1P36-201ENST00000487709 FUT11Q495W5 492 aa3.33□□□□□ -1.88
HMGB1P36-201ENST00000487709 MPP7Q5T2T1 576 aa3.33□□□□□ -1.88
HMGB1P36-201ENST00000487709 FAM46CQ5VWP2 391 aa3.33□□□□□ -1.88
HMGB1P36-201ENST00000487709 BSPRYQ5W0U4 402 aa3.33□□□□□ -1.88
HMGB1P36-201ENST00000487709 ARHGAP11AQ6P4F7 1023 aa3.33□□□□□ -1.88
HMGB1P36-201ENST00000487709 TRIM65Q6PJ69 517 aa3.33□□□□□ -1.88
HMGB1P36-201ENST00000487709 TMEM207Q6UWW9 146 aa3.33□□□□□ -1.88
HMGB1P36-201ENST00000487709 TMEM182Q6ZP80 229 aaPredicted RBP3.33□□□□□ -1.88
HMGB1P36-201ENST00000487709 SLC24A5Q71RS6 500 aa3.33□□□□□ -1.88
HMGB1P36-201ENST00000487709 CHMP1BQ7LBR1 199 aa3.33□□□□□ -1.88
HMGB1P36-201ENST00000487709 GPR141Q7Z602 305 aa3.33□□□□□ -1.88
HMGB1P36-201ENST00000487709 IQCA1Q86XH1 822 aa3.33□□□□□ -1.88
HMGB1P36-201ENST00000487709 TUSC5Q8IXB3 177 aa3.33□□□□□ -1.88
HMGB1P36-201ENST00000487709 RCOR2Q8IZ40 523 aa3.33□□□□□ -1.88
HMGB1P36-201ENST00000487709 ANKRD13CQ8N6S4 541 aa3.33□□□□□ -1.88
HMGB1P36-201ENST00000487709 KLHDC1Q8N7A1 406 aa3.33□□□□□ -1.88
HMGB1P36-201ENST00000487709 NHLRC2Q8NBF2 726 aa3.33□□□□□ -1.88
HMGB1P36-201ENST00000487709 OR5T2Q8NGG2 359 aa3.33□□□□□ -1.88
HMGB1P36-201ENST00000487709 CHURC1Q8WUH1 139 aa3.33□□□□□ -1.88
HMGB1P36-201ENST00000487709 CORO2AQ92828 525 aa3.33□□□□□ -1.88
HMGB1P36-201ENST00000487709 RIT1Q92963 219 aa3.33□□□□□ -1.88
HMGB1P36-201ENST00000487709 MR1Q95460 341 aa3.33□□□□□ -1.88
HMGB1P36-201ENST00000487709 TEKT1Q969V4 418 aa3.33□□□□□ -1.88
HMGB1P36-201ENST00000487709 ST6GALNAC6Q969X2 333 aa3.33□□□□□ -1.88
HMGB1P36-201ENST00000487709 GMPPAQ96IJ6 420 aaPredicted RBP3.33□□□□□ -1.88
HMGB1P36-201ENST00000487709 PGLYRP2Q96PD5 576 aa3.33□□□□□ -1.88
HMGB1P36-201ENST00000487709 CDCA3Q99618 268 aaPredicted RBP3.33□□□□□ -1.88
HMGB1P36-201ENST00000487709 ASCL2Q99929 193 aa3.33□□□□□ -1.88
HMGB1P36-201ENST00000487709 UTP14AQ9BVJ6 771 aaKnown RBP3.33□□□□□ -1.88
HMGB1P36-201ENST00000487709 LSG1Q9H089 658 aaKnown RBP3.33□□□□□ -1.88
HMGB1P36-201ENST00000487709 MINDY3Q9H8M7 445 aa3.33□□□□□ -1.88
HMGB1P36-201ENST00000487709 LMAN1LQ9HAT1 526 aa3.33□□□□□ -1.88
HMGB1P36-201ENST00000487709 TUFT1Q9NNX1 390 aa3.33□□□□□ -1.88
HMGB1P36-201ENST00000487709 FBXL5Q9UKA1 691 aa3.33□□□□□ -1.88
HMGB1P36-201ENST00000487709 ELF5Q9UKW6 265 aaPredicted RBP3.33□□□□□ -1.88
HMGB1P36-201ENST00000487709 MYH14Q7Z406 1995 aaKnown RBP3.32□□□□□ -1.88
HMGB1P36-201ENST00000487709 TRAV18A0A075B6X5 111 aa3.32□□□□□ -1.88
HMGB1P36-201ENST00000487709 IGKV3D-20A0A0C4DH25 116 aa3.32□□□□□ -1.88
HMGB1P36-201ENST00000487709 A0A1B0GU03 582 aa3.32□□□□□ -1.88
HMGB1P36-201ENST00000487709 IQCMA0A1B0GVH7 501 aa3.32□□□□□ -1.88
HMGB1P36-201ENST00000487709 MEIOCA2RUB1 952 aa3.32□□□□□ -1.88
HMGB1P36-201ENST00000487709 C5orf52A6NGY3 159 aa3.32□□□□□ -1.88
HMGB1P36-201ENST00000487709 SLC1A7O00341 560 aa3.32□□□□□ -1.88
HMGB1P36-201ENST00000487709 NADKO95544 446 aaPredicted RBP3.32□□□□□ -1.88
HMGB1P36-201ENST00000487709 GPIP06744 558 aa3.32□□□□□ -1.88
HMGB1P36-201ENST00000487709 C8orf89P0DMQ9 161 aa3.32□□□□□ -1.88
HMGB1P36-201ENST00000487709 CEACAM1P13688 526 aa3.32□□□□□ -1.88
HMGB1P36-201ENST00000487709 GLULP15104 373 aa3.32□□□□□ -1.88
HMGB1P36-201ENST00000487709 GNB3P16520 340 aa3.32□□□□□ -1.88
HMGB1P36-201ENST00000487709 MUTP22033 750 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms