RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 EGLN2Q96KS0 407 aa13.51□□□□□ -0.25
CLK3-204ENST00000483723 TSSK3Q96PN8 268 aa13.51□□□□□ -0.25
CLK3-204ENST00000483723 AIF1LQ9BQI0 150 aa13.51□□□□□ -0.25
CLK3-204ENST00000483723 PCED1AQ9H1Q7 454 aa13.51□□□□□ -0.25
CLK3-204ENST00000483723 NANOGQ9H9S0 305 aa13.51□□□□□ -0.25
CLK3-204ENST00000483723 IL1RL2Q9HB29 575 aa13.51□□□□□ -0.25
CLK3-204ENST00000483723 FBXL21Q9UKT6 434 aa13.51□□□□□ -0.25
CLK3-204ENST00000483723 MAN2B2Q9Y2E5 1009 aa13.51□□□□□ -0.25
CLK3-204ENST00000483723 C15orf38-AP3S2A0A0A6YYH1 394 aa13.5□□□□□ -0.25
CLK3-204ENST00000483723 SCAMP1O15126 338 aa13.5□□□□□ -0.25
CLK3-204ENST00000483723 KDM1AO60341 852 aa13.5□□□□□ -0.25
CLK3-204ENST00000483723 MYO1DO94832 1006 aa13.5□□□□□ -0.25
CLK3-204ENST00000483723 MSX2P35548 267 aaPredicted RBP13.5□□□□□ -0.25
CLK3-204ENST00000483723 CCR8P51685 355 aa13.5□□□□□ -0.25
CLK3-204ENST00000483723 EEFSECP57772 596 aaKnown RBP13.5□□□□□ -0.25
CLK3-204ENST00000483723 AP2B1P63010 937 aa13.5□□□□□ -0.25
CLK3-204ENST00000483723 REEP5Q00765 189 aa13.5□□□□□ -0.25
CLK3-204ENST00000483723 MEF2AQ02078 507 aaPredicted RBP13.5□□□□□ -0.25
CLK3-204ENST00000483723 MTAPQ13126 283 aa13.5□□□□□ -0.25
CLK3-204ENST00000483723 EIF2B5Q13144 721 aaKnown RBP13.5□□□□□ -0.25
CLK3-204ENST00000483723 FLOT2Q14254 428 aa13.5□□□□□ -0.25
CLK3-204ENST00000483723 CAPRIN1Q14444 709 aaKnown RBP13.5□□□□□ -0.25
CLK3-204ENST00000483723 ICE2Q659A1 982 aa13.5□□□□□ -0.25
CLK3-204ENST00000483723 MSANTD1Q6ZTZ1 278 aa13.5□□□□□ -0.25
CLK3-204ENST00000483723 RD3Q7Z3Z2 195 aa13.5□□□□□ -0.25
CLK3-204ENST00000483723 ARPINQ7Z6K5 226 aa13.5□□□□□ -0.25
CLK3-204ENST00000483723 DHDDSQ86SQ9 333 aa13.5□□□□□ -0.25
CLK3-204ENST00000483723 SPEM1Q8N4L4 309 aa13.5□□□□□ -0.25
CLK3-204ENST00000483723 FAM156AQ8NDB6 213 aa13.5□□□□□ -0.25
CLK3-204ENST00000483723 DNAJB8Q8NHS0 232 aa13.5□□□□□ -0.25
CLK3-204ENST00000483723 CLHC1Q8NHS4 586 aa13.5□□□□□ -0.25
CLK3-204ENST00000483723 SH3KBP1Q96B97 665 aa13.5□□□□□ -0.25
CLK3-204ENST00000483723 ACAT2Q9BWD1 397 aa13.5□□□□□ -0.25
CLK3-204ENST00000483723 CUEDC1Q9NWM3 386 aaPredicted RBP13.5□□□□□ -0.25
CLK3-204ENST00000483723 STOML1Q9UBI4 398 aa13.5□□□□□ -0.25
CLK3-204ENST00000483723 MAPRE3Q9UPY8 281 aa13.5□□□□□ -0.25
CLK3-204ENST00000483723 NEUROG3Q9Y4Z2 214 aa13.5□□□□□ -0.25
CLK3-204ENST00000483723 PCDHB11Q9Y5F2 797 aa13.5□□□□□ -0.25
CLK3-204ENST00000483723 COL6A3P12111 3177 aa13.5□□□□□ -0.25
CLK3-204ENST00000483723 PRAMEF33A0A0G2JMD5 474 aa13.5□□□□□ -0.25
CLK3-204ENST00000483723 SPTY2D1-AS1A0A0U1RR47 76 aa13.5□□□□□ -0.25
CLK3-204ENST00000483723 METTL12A8MUP2 240 aa13.5□□□□□ -0.25
CLK3-204ENST00000483723 RASGRP1O95267 797 aa13.5□□□□□ -0.25
CLK3-204ENST00000483723 TBX6O95947 436 aaPredicted RBP13.5□□□□□ -0.25
CLK3-204ENST00000483723 ANPEPP15144 967 aa13.5□□□□□ -0.25
CLK3-204ENST00000483723 PTX3P26022 381 aaPredicted RBP13.5□□□□□ -0.25
CLK3-204ENST00000483723 PSMB5P28074 263 aa13.5□□□□□ -0.25
CLK3-204ENST00000483723 SERPINB1P30740 379 aa13.5□□□□□ -0.25
CLK3-204ENST00000483723 SLC19A1P41440 591 aa13.5□□□□□ -0.25
CLK3-204ENST00000483723 ACTR1BP42025 376 aa13.5□□□□□ -0.25
CLK3-204ENST00000483723 ACTR1AP61163 376 aa13.5□□□□□ -0.25
CLK3-204ENST00000483723 KRT33BQ14525 404 aa13.5□□□□□ -0.25
CLK3-204ENST00000483723 CCDC6Q16204 474 aa13.5□□□□□ -0.25
CLK3-204ENST00000483723 FXNQ16595 210 aa13.5□□□□□ -0.25
CLK3-204ENST00000483723 RNF111Q6ZNA4 994 aa13.5□□□□□ -0.25
CLK3-204ENST00000483723 ARMCX6Q7L4S7 300 aa13.5□□□□□ -0.25
CLK3-204ENST00000483723 SIX5Q8N196 739 aa13.5□□□□□ -0.25
CLK3-204ENST00000483723 METTL4Q8N3J2 472 aa13.5□□□□□ -0.25
CLK3-204ENST00000483723 CAMKK1Q8N5S9 505 aa13.5□□□□□ -0.25
CLK3-204ENST00000483723 C1orf52Q8N6N3 182 aaKnown RBP13.5□□□□□ -0.25
CLK3-204ENST00000483723 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.5□□□□□ -0.25
CLK3-204ENST00000483723 DNAJB14Q8TBM8 379 aa13.5□□□□□ -0.25
CLK3-204ENST00000483723 SLC26A7Q8TE54 656 aa13.5□□□□□ -0.25
CLK3-204ENST00000483723 ZFPM2Q8WW38 1151 aa13.5□□□□□ -0.25
CLK3-204ENST00000483723 RLN3Q8WXF3 142 aa13.5□□□□□ -0.25
CLK3-204ENST00000483723 ZUFSPQ96AP4 578 aa13.5□□□□□ -0.25
CLK3-204ENST00000483723 CGREF1Q99674 301 aa13.5□□□□□ -0.25
CLK3-204ENST00000483723 XKR8Q9H6D3 395 aa13.5□□□□□ -0.25
CLK3-204ENST00000483723 PRDM6Q9NQX0 595 aa13.5□□□□□ -0.25
CLK3-204ENST00000483723 FANCMQ8IYD8 2048 aa13.49□□□□□ -0.25
CLK3-204ENST00000483723 TRBV5-3A0A0A0MS03 114 aa13.49□□□□□ -0.25
CLK3-204ENST00000483723 H3BNX3 289 aa13.49□□□□□ -0.25
CLK3-204ENST00000483723 KLHL18O94889 574 aa13.49□□□□□ -0.25
CLK3-204ENST00000483723 KCNH1O95259 989 aa13.49□□□□□ -0.25
CLK3-204ENST00000483723 TGFB1P01137 390 aa13.49□□□□□ -0.25
CLK3-204ENST00000483723 F3P13726 295 aa13.49□□□□□ -0.25
CLK3-204ENST00000483723 TIA1P31483 386 aaKnown RBP eCLIP13.49□□□□□ -0.25
CLK3-204ENST00000483723 S100A3P33764 101 aa13.49□□□□□ -0.25
CLK3-204ENST00000483723 ASMTP46597 345 aa13.49□□□□□ -0.25
CLK3-204ENST00000483723 RPS9P46781 194 aaKnown RBP13.49□□□□□ -0.25
CLK3-204ENST00000483723 CSNK1G2P78368 415 aa13.49□□□□□ -0.25
CLK3-204ENST00000483723 PHEXP78562 749 aa13.49□□□□□ -0.25
CLK3-204ENST00000483723 ABATP80404 500 aa13.49□□□□□ -0.25
CLK3-204ENST00000483723 SRSF11Q05519 484 aaKnown RBP13.49□□□□□ -0.25
CLK3-204ENST00000483723 FZD2Q14332 565 aa13.49□□□□□ -0.25
CLK3-204ENST00000483723 MAPKAPK3Q16644 382 aa13.49□□□□□ -0.25
CLK3-204ENST00000483723 DPY19L1Q2PZI1 675 aa13.49□□□□□ -0.25
CLK3-204ENST00000483723 C6orf10Q5SRN2 563 aa13.49□□□□□ -0.25
CLK3-204ENST00000483723 LRIF1Q5T3J3 769 aa13.49□□□□□ -0.25
CLK3-204ENST00000483723 SYT12Q8IV01 421 aa13.49□□□□□ -0.25
CLK3-204ENST00000483723 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.49□□□□□ -0.25
CLK3-204ENST00000483723 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.49□□□□□ -0.25
CLK3-204ENST00000483723 UBALD2Q8IYN6 164 aa13.49□□□□□ -0.25
CLK3-204ENST00000483723 CADM4Q8NFZ8 388 aa13.49□□□□□ -0.25
CLK3-204ENST00000483723 DUS3LQ96G46 650 aaKnown RBP13.49□□□□□ -0.25
CLK3-204ENST00000483723 OR52E6Q96RD3 313 aa13.49□□□□□ -0.25
CLK3-204ENST00000483723 TPSD1Q9BZJ3 242 aa13.49□□□□□ -0.25
CLK3-204ENST00000483723 PCDHAC1Q9H158 963 aa13.49□□□□□ -0.25
CLK3-204ENST00000483723 KCNH6Q9H252 994 aa13.49□□□□□ -0.25
CLK3-204ENST00000483723 SERHLQ9NQF3 203 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms