RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 ABHD18Q0P651 414 aa10.45□□□□□ -0.74
VPS52-217ENST00000478934 CTF1Q16619 201 aa10.45□□□□□ -0.74
VPS52-217ENST00000478934 LILRA6Q6PI73 481 aa10.45□□□□□ -0.74
VPS52-217ENST00000478934 AGTRAPQ6RW13 159 aa10.45□□□□□ -0.74
VPS52-217ENST00000478934 FKBP9P1Q75LS8 142 aa10.45□□□□□ -0.74
VPS52-217ENST00000478934 B3GNT8Q7Z7M8 397 aa10.45□□□□□ -0.74
VPS52-217ENST00000478934 C2orf73Q8N5S3 287 aaPredicted RBP10.45□□□□□ -0.74
VPS52-217ENST00000478934 C1orf52Q8N6N3 182 aaKnown RBP10.45□□□□□ -0.74
VPS52-217ENST00000478934 WDR20Q8TBZ3 569 aa10.45□□□□□ -0.74
VPS52-217ENST00000478934 ZFP90Q8TF47 636 aa10.45□□□□□ -0.74
VPS52-217ENST00000478934 ING5Q8WYH8 240 aa10.45□□□□□ -0.74
VPS52-217ENST00000478934 TESCQ96BS2 214 aa10.45□□□□□ -0.74
VPS52-217ENST00000478934 HSH2DQ96JZ2 352 aa10.45□□□□□ -0.74
VPS52-217ENST00000478934 ZBP1Q9H171 429 aa10.45□□□□□ -0.74
VPS52-217ENST00000478934 AMBNQ9NP70 447 aa10.45□□□□□ -0.74
VPS52-217ENST00000478934 ZDHHC4Q9NPG8 344 aa10.45□□□□□ -0.74
VPS52-217ENST00000478934 USE1Q9NZ43 259 aa10.45□□□□□ -0.74
VPS52-217ENST00000478934 TBX21Q9UL17 535 aa10.45□□□□□ -0.74
VPS52-217ENST00000478934 PABPN1LA6NDY0 278 aaKnown RBP10.44□□□□□ -0.74
VPS52-217ENST00000478934 TRIM64BA6NI03 449 aa10.44□□□□□ -0.74
VPS52-217ENST00000478934 K7ESM1 405 aa10.44□□□□□ -0.74
VPS52-217ENST00000478934 NDUFS2O75306 463 aa10.44□□□□□ -0.74
VPS52-217ENST00000478934 MOSPD3O75425 235 aa10.44□□□□□ -0.74
VPS52-217ENST00000478934 OPN1SWP03999 348 aa10.44□□□□□ -0.74
VPS52-217ENST00000478934 JUNBP17275 347 aaPredicted RBP10.44□□□□□ -0.74
VPS52-217ENST00000478934 LAG3P18627 525 aa10.44□□□□□ -0.74
VPS52-217ENST00000478934 PSMB9P28065 219 aa10.44□□□□□ -0.74
VPS52-217ENST00000478934 CD6P30203 668 aa10.44□□□□□ -0.74
VPS52-217ENST00000478934 NCS1P62166 190 aa10.44□□□□□ -0.74
VPS52-217ENST00000478934 OCA2Q04671 838 aa10.44□□□□□ -0.74
VPS52-217ENST00000478934 DUOXA1Q1HG43 343 aa10.44□□□□□ -0.74
VPS52-217ENST00000478934 GGTA1PQ4G0N0 100 aa10.44□□□□□ -0.74
VPS52-217ENST00000478934 CATSPEREQ5SY80 951 aa10.44□□□□□ -0.74
VPS52-217ENST00000478934 SLCO6A1Q86UG4 719 aa10.44□□□□□ -0.74
VPS52-217ENST00000478934 TRIM73Q86UV7 250 aa10.44□□□□□ -0.74
VPS52-217ENST00000478934 SVOPLQ8N434 492 aa10.44□□□□□ -0.74
VPS52-217ENST00000478934 FAR1Q8WVX9 515 aa10.44□□□□□ -0.74
VPS52-217ENST00000478934 NELL1Q92832 810 aa10.44□□□□□ -0.74
VPS52-217ENST00000478934 IRF7Q92985 503 aa10.44□□□□□ -0.74
VPS52-217ENST00000478934 GLMNQ92990 594 aa10.44□□□□□ -0.74
VPS52-217ENST00000478934 MUL1Q969V5 352 aa10.44□□□□□ -0.74
VPS52-217ENST00000478934 CPEB1Q9BZB8 566 aaKnown RBP10.44□□□□□ -0.74
VPS52-217ENST00000478934 SGK2Q9HBY8 427 aa10.44□□□□□ -0.74
VPS52-217ENST00000478934 POLE4Q9NR33 117 aa10.44□□□□□ -0.74
VPS52-217ENST00000478934 ASAH2Q9NR71 780 aa10.44□□□□□ -0.74
VPS52-217ENST00000478934 TMEM184CQ9NVA4 438 aa10.44□□□□□ -0.74
VPS52-217ENST00000478934 PDP1Q9P0J1 537 aaPredicted RBP10.44□□□□□ -0.74
VPS52-217ENST00000478934 STOX2Q9P2F5 926 aaPredicted RBP10.44□□□□□ -0.74
VPS52-217ENST00000478934 VPS29Q9UBQ0 182 aa10.44□□□□□ -0.74
VPS52-217ENST00000478934 TMEM247A6NEH6 219 aa10.44□□□□□ -0.74
VPS52-217ENST00000478934 KDELR2P33947 212 aa10.44□□□□□ -0.74
VPS52-217ENST00000478934 VEGFBP49765 207 aa10.44□□□□□ -0.74
VPS52-217ENST00000478934 HNMTP50135 292 aa10.44□□□□□ -0.74
VPS52-217ENST00000478934 MC1RQ01726 317 aa10.44□□□□□ -0.74
VPS52-217ENST00000478934 GAB1Q13480 694 aa10.44□□□□□ -0.74
VPS52-217ENST00000478934 VMACQ2NL98 169 aa10.44□□□□□ -0.74
VPS52-217ENST00000478934 ADPRMQ3LIE5 342 aa10.44□□□□□ -0.74
VPS52-217ENST00000478934 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.44□□□□□ -0.745e-10■□□□□ 8.6
VPS52-217ENST00000478934 OR2T5Q6IEZ7 315 aa10.44□□□□□ -0.74
VPS52-217ENST00000478934 RNF165Q6ZSG1 346 aa10.44□□□□□ -0.74
VPS52-217ENST00000478934 CCDC71Q8IV32 467 aaPredicted RBP10.44□□□□□ -0.74
VPS52-217ENST00000478934 RAVER1Q8IY67 606 aaKnown RBP10.44□□□□□ -0.74
VPS52-217ENST00000478934 OR4K1Q8NGD4 311 aa10.44□□□□□ -0.74
VPS52-217ENST00000478934 OR2T29Q8NH02 315 aa10.44□□□□□ -0.74
VPS52-217ENST00000478934 HHIPQ96QV1 700 aa10.44□□□□□ -0.74
VPS52-217ENST00000478934 PKP4Q99569 1192 aa10.44□□□□□ -0.74
VPS52-217ENST00000478934 TMEM9Q9P0T7 183 aa10.44□□□□□ -0.74
VPS52-217ENST00000478934 GULP1Q9UBP9 304 aa10.44□□□□□ -0.74
VPS52-217ENST00000478934 OGDHLQ9ULD0 1010 aa10.44□□□□□ -0.74
VPS52-217ENST00000478934 ORC6Q9Y5N6 252 aa10.44□□□□□ -0.74
VPS52-217ENST00000478934 ZNF106Q9H2Y7 1883 aaKnown RBP10.43□□□□□ -0.74
VPS52-217ENST00000478934 EVPLLA8MZ36 301 aa10.43□□□□□ -0.74
VPS52-217ENST00000478934 ZSCAN9O15535 394 aaPredicted RBP10.43□□□□□ -0.74
VPS52-217ENST00000478934 RECQL5O94762 991 aaPredicted RBP10.43□□□□□ -0.74
VPS52-217ENST00000478934 HOXA9P31269 272 aa10.43□□□□□ -0.74
VPS52-217ENST00000478934 RXRGP48443 463 aa10.43□□□□□ -0.74
VPS52-217ENST00000478934 MASP1P48740 699 aa10.43□□□□□ -0.74
VPS52-217ENST00000478934 IFITM3Q01628 133 aa10.43□□□□□ -0.74
VPS52-217ENST00000478934 MTAPQ13126 283 aa10.43□□□□□ -0.74
VPS52-217ENST00000478934 DNASE1L3Q13609 305 aa10.43□□□□□ -0.74
VPS52-217ENST00000478934 MAPK11Q15759 364 aa10.43□□□□□ -0.74
VPS52-217ENST00000478934 NPTX1Q15818 432 aa10.43□□□□□ -0.74
VPS52-217ENST00000478934 ZNF385BQ569K4 471 aa10.43□□□□□ -0.74
VPS52-217ENST00000478934 COX20Q5RI15 118 aa10.43□□□□□ -0.74
VPS52-217ENST00000478934 PLEKHS1Q5SXH7 462 aa10.43□□□□□ -0.74
VPS52-217ENST00000478934 PLPP4Q5VZY2 271 aa10.43□□□□□ -0.74
VPS52-217ENST00000478934 ANGPTL8Q6UXH0 198 aa10.43□□□□□ -0.74
VPS52-217ENST00000478934 MMP21Q8N119 569 aa10.43□□□□□ -0.74
VPS52-217ENST00000478934 ASZ1Q8WWH4 475 aa10.43□□□□□ -0.74
VPS52-217ENST00000478934 NEIL2Q969S2 332 aa10.43□□□□□ -0.74
VPS52-217ENST00000478934 ZNF641Q96N77 438 aaPredicted RBP10.43□□□□□ -0.74
VPS52-217ENST00000478934 LRRC3BQ96PB8 259 aa10.43□□□□□ -0.74
VPS52-217ENST00000478934 GPN2Q9H9Y4 310 aaPredicted RBP10.43□□□□□ -0.74
VPS52-217ENST00000478934 IL1RAPQ9NPH3 570 aa10.43□□□□□ -0.74
VPS52-217ENST00000478934 RAPGEFL1Q9UHV5 662 aa10.43□□□□□ -0.74
VPS52-217ENST00000478934 ENPP5Q9UJA9 477 aa10.43□□□□□ -0.74
VPS52-217ENST00000478934 EXO1Q9UQ84 846 aaKnown RBP10.43□□□□□ -0.74
VPS52-217ENST00000478934 ERVW-1Q9UQF0 538 aa10.43□□□□□ -0.74
VPS52-217ENST00000478934 PRKAB1Q9Y478 270 aa10.43□□□□□ -0.74
VPS52-217ENST00000478934 HELZP42694 1942 aaKnown RBP10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms