RNA–Protein interactions for RNA: ENST00000477937.2

HDAC7-222, Transcript of histone deacetylase 7, human

TSL 5

Gene HDAC7, Length 410 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC7-222	ENST00000477937	HS3ST3B1	Q9Y662	390 aa		13.14	□□□□□ -0.31
HDAC7-222	ENST00000477937	MYO18B	Q8IUG5	2567 aa		13.13	□□□□□ -0.31
HDAC7-222	ENST00000477937	IGLV3-12	A0A075B6K2	115 aa		13.13	□□□□□ -0.31
HDAC7-222	ENST00000477937	KCNE1B	A0A087WTH5	132 aa		13.13	□□□□□ -0.31
HDAC7-222	ENST00000477937	MASP2	O00187	686 aa		13.13	□□□□□ -0.31
HDAC7-222	ENST00000477937	RAD51C	O43502	376 aa		13.13	□□□□□ -0.31
HDAC7-222	ENST00000477937	ENO2	P09104	434 aa	Predicted RBP	13.13	□□□□□ -0.31
HDAC7-222	ENST00000477937	NPPB	P16860	134 aa		13.13	□□□□□ -0.31
HDAC7-222	ENST00000477937	GRK3	P35626	688 aa		13.13	□□□□□ -0.31
HDAC7-222	ENST00000477937	ILF2	Q12905	390 aa	Known RBP	13.13	□□□□□ -0.31
HDAC7-222	ENST00000477937	FAM53B	Q14153	422 aa		13.13	□□□□□ -0.31
HDAC7-222	ENST00000477937	TUBB8	Q3ZCM7	444 aa		13.13	□□□□□ -0.31
HDAC7-222	ENST00000477937	VWA2	Q5GFL6	755 aa		13.13	□□□□□ -0.31
HDAC7-222	ENST00000477937	JMJD6	Q6NYC1	403 aa	Predicted RBP	13.13	□□□□□ -0.31
HDAC7-222	ENST00000477937	KIRREL2	Q6UWL6	708 aa		13.13	□□□□□ -0.31
HDAC7-222	ENST00000477937	SYT10	Q6XYQ8	523 aa		13.13	□□□□□ -0.31
HDAC7-222	ENST00000477937	ATCAY	Q86WG3	371 aa		13.13	□□□□□ -0.31
HDAC7-222	ENST00000477937	PRSS58	Q8IYP2	241 aa		13.13	□□□□□ -0.31
HDAC7-222	ENST00000477937	C17orf53	Q8N3J3	647 aa	Predicted RBP	13.13	□□□□□ -0.31
HDAC7-222	ENST00000477937	NKAP	Q8N5F7	415 aa	Known RBP	13.13	□□□□□ -0.31
HDAC7-222	ENST00000477937	EFCAB3	Q8N7B9	438 aa		13.13	□□□□□ -0.31
HDAC7-222	ENST00000477937	ATL1	Q8WXF7	558 aa		13.13	□□□□□ -0.31
HDAC7-222	ENST00000477937	MIB2	Q96AX9	1013 aa		13.13	□□□□□ -0.31
HDAC7-222	ENST00000477937	THAP11	Q96EK4	314 aa		13.13	□□□□□ -0.31
HDAC7-222	ENST00000477937	HAUS8	Q9BT25	410 aa		13.13	□□□□□ -0.31
HDAC7-222	ENST00000477937	MFRP	Q9BY79	579 aa		13.13	□□□□□ -0.31
HDAC7-222	ENST00000477937	DRC3	Q9H069	523 aa		13.13	□□□□□ -0.31
HDAC7-222	ENST00000477937	ZNF552	Q9H707	407 aa	Predicted RBP	13.13	□□□□□ -0.31
HDAC7-222	ENST00000477937	SLAMF7	Q9NQ25	335 aa		13.13	□□□□□ -0.31
HDAC7-222	ENST00000477937	TRPC4	Q9UBN4	977 aa		13.13	□□□□□ -0.31
HDAC7-222	ENST00000477937	C3orf18	Q9UK00	162 aa		13.13	□□□□□ -0.31
HDAC7-222	ENST00000477937	UTP11	Q9Y3A2	253 aa	Known RBP	13.13	□□□□□ -0.31
HDAC7-222	ENST00000477937	PSAT1	Q9Y617	370 aa		13.13	□□□□□ -0.31
HDAC7-222	ENST00000477937	SCN2A	Q99250	2005 aa		13.12	□□□□□ -0.31
HDAC7-222	ENST00000477937		A0A0A6YYC8	382 aa	Predicted RBP	13.12	□□□□□ -0.31
HDAC7-222	ENST00000477937	FAM95C	A0A1B0GW59	222 aa		13.12	□□□□□ -0.31
HDAC7-222	ENST00000477937	FEZF1	A0PJY2	475 aa		13.12	□□□□□ -0.31
HDAC7-222	ENST00000477937		I3L1I5	382 aa	Predicted RBP	13.12	□□□□□ -0.31
HDAC7-222	ENST00000477937	EIF3H	O15372	352 aa	Known RBP eCLIP	13.12	□□□□□ -0.31
HDAC7-222	ENST00000477937	P2RX6	O15547	441 aa		13.12	□□□□□ -0.31
HDAC7-222	ENST00000477937	FOXS1	O43638	330 aa		13.12	□□□□□ -0.31
HDAC7-222	ENST00000477937	CDH1	P12830	882 aa		13.12	□□□□□ -0.31
HDAC7-222	ENST00000477937	ITGA3	P26006	1051 aa		13.12	□□□□□ -0.31
HDAC7-222	ENST00000477937	SLC26A3	P40879	764 aa		13.12	□□□□□ -0.31
HDAC7-222	ENST00000477937	AVPR1B	P47901	424 aa		13.12	□□□□□ -0.31
HDAC7-222	ENST00000477937	CD97	P48960	835 aa		13.12	□□□□□ -0.31
HDAC7-222	ENST00000477937	CSNK1G2	P78368	415 aa		13.12	□□□□□ -0.31
HDAC7-222	ENST00000477937	C2orf54	Q08AI8	447 aa		13.12	□□□□□ -0.31
HDAC7-222	ENST00000477937	IRAK1BP1	Q5VVH5	260 aa		13.12	□□□□□ -0.31
HDAC7-222	ENST00000477937	SLC6A19	Q695T7	634 aa		13.12	□□□□□ -0.31
HDAC7-222	ENST00000477937	TMEM207	Q6UWW9	146 aa		13.12	□□□□□ -0.31
HDAC7-222	ENST00000477937	CAPN12	Q6ZSI9	719 aa		13.12	□□□□□ -0.31
HDAC7-222	ENST00000477937	ARHGEF39	Q8N4T4	335 aa		13.12	□□□□□ -0.31
HDAC7-222	ENST00000477937	RBMXL3	Q8N7X1	1067 aa	Known RBP	13.12	□□□□□ -0.31
HDAC7-222	ENST00000477937	AMER3	Q8N944	861 aa		13.12	□□□□□ -0.31
HDAC7-222	ENST00000477937	OR11G2	Q8NGC1	345 aa		13.12	□□□□□ -0.31
HDAC7-222	ENST00000477937	CPT1C	Q8TCG5	803 aa		13.12	□□□□□ -0.31
HDAC7-222	ENST00000477937	ANKRD7	Q92527	254 aa		13.12	□□□□□ -0.31
HDAC7-222	ENST00000477937	TM9SF4	Q92544	642 aa		13.12	□□□□□ -0.31
HDAC7-222	ENST00000477937	PYCR2	Q96C36	320 aa		13.12	□□□□□ -0.31
HDAC7-222	ENST00000477937	FBXL8	Q96CD0	374 aa		13.12	□□□□□ -0.31
HDAC7-222	ENST00000477937	VPS39	Q96JC1	886 aa		13.12	□□□□□ -0.31
HDAC7-222	ENST00000477937	FAM129A	Q9BZQ8	928 aa		13.12	□□□□□ -0.31
HDAC7-222	ENST00000477937	TGIF2	Q9GZN2	237 aa		13.12	□□□□□ -0.31
HDAC7-222	ENST00000477937	SAYSD1	Q9NPB0	183 aa		13.12	□□□□□ -0.31
HDAC7-222	ENST00000477937	MKKS	Q9NPJ1	570 aa	Predicted RBP	13.12	□□□□□ -0.31
HDAC7-222	ENST00000477937	C14orf105	Q9NVL8	296 aa		13.12	□□□□□ -0.31
HDAC7-222	ENST00000477937	SH2B3	Q9UQQ2	575 aa		13.12	□□□□□ -0.31
HDAC7-222	ENST00000477937	MAP4K5	Q9Y4K4	846 aa		13.12	□□□□□ -0.31
HDAC7-222	ENST00000477937	IDS	B3KWA1	339 aa		13.11	□□□□□ -0.31
HDAC7-222	ENST00000477937	MAP2K7	O14733	419 aa		13.11	□□□□□ -0.31
HDAC7-222	ENST00000477937	ALOX12B	O75342	701 aa		13.11	□□□□□ -0.31
HDAC7-222	ENST00000477937	VPS4B	O75351	444 aa		13.11	□□□□□ -0.31
HDAC7-222	ENST00000477937	SORBS2	O94875	1100 aa	Known RBP	13.11	□□□□□ -0.31
HDAC7-222	ENST00000477937	GUCA1C	O95843	209 aa		13.11	□□□□□ -0.31
HDAC7-222	ENST00000477937	ACPP	P15309	386 aa		13.11	□□□□□ -0.31
HDAC7-222	ENST00000477937	ZNF37A	P17032	561 aa	Predicted RBP	13.11	□□□□□ -0.31
HDAC7-222	ENST00000477937	CXCR2	P25025	360 aa		13.11	□□□□□ -0.31
HDAC7-222	ENST00000477937	SSTR1	P30872	391 aa		13.11	□□□□□ -0.31
HDAC7-222	ENST00000477937	EMP2	P54851	167 aa		13.11	□□□□□ -0.31
HDAC7-222	ENST00000477937	SLC12A2	P55011	1212 aa		13.11	□□□□□ -0.31
HDAC7-222	ENST00000477937	CAV1	Q03135	178 aa		13.11	□□□□□ -0.31
HDAC7-222	ENST00000477937	SBSN	Q6UWP8	590 aa		13.11	□□□□□ -0.31
HDAC7-222	ENST00000477937	IGFL3	Q6UXB1	125 aa		13.11	□□□□□ -0.31
HDAC7-222	ENST00000477937	LAPTM4B	Q86VI4	370 aa		13.11	□□□□□ -0.31
HDAC7-222	ENST00000477937	PARP9	Q8IXQ6	854 aa		13.11	□□□□□ -0.31
HDAC7-222	ENST00000477937	ZADH2	Q8N4Q0	377 aa		13.11	□□□□□ -0.31
HDAC7-222	ENST00000477937	CAMKV	Q8NCB2	501 aa		13.11	□□□□□ -0.31
HDAC7-222	ENST00000477937	OR56A3	Q8NH54	315 aa		13.11	□□□□□ -0.31
HDAC7-222	ENST00000477937	CDKL2	Q92772	493 aa		13.11	□□□□□ -0.31
HDAC7-222	ENST00000477937	PNPLA2	Q96AD5	504 aa		13.11	□□□□□ -0.31
HDAC7-222	ENST00000477937	RAB17	Q9H0T7	212 aa		13.11	□□□□□ -0.31
HDAC7-222	ENST00000477937	RHOJ	Q9H4E5	214 aa		13.11	□□□□□ -0.31
HDAC7-222	ENST00000477937	GRHL1	Q9NZI5	618 aa		13.11	□□□□□ -0.31
HDAC7-222	ENST00000477937	TXNDC16	Q9P2K2	825 aa		13.11	□□□□□ -0.31
HDAC7-222	ENST00000477937	VPS4A	Q9UN37	437 aa		13.11	□□□□□ -0.31
HDAC7-222	ENST00000477937	NOVA2	Q9UNW9	492 aa	Known RBP	13.11	□□□□□ -0.31
HDAC7-222	ENST00000477937	SHANK1	Q9Y566	2161 aa		13.1	□□□□□ -0.31
HDAC7-222	ENST00000477937		H0YIG0	161 aa		13.1	□□□□□ -0.31
HDAC7-222	ENST00000477937	PCDH17	O14917	1159 aa		13.1	□□□□□ -0.31

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