RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-215ENST00000474539 ZFYVE21Q9BQ24 234 aa4.49□□□□□ -1.69
CCNL1-215ENST00000474539 DUSP26Q9BV47 211 aa4.49□□□□□ -1.69
CCNL1-215ENST00000474539 RC3H2Q9HBD1 1191 aaKnown RBP4.49□□□□□ -1.69
CCNL1-215ENST00000474539 UPB1Q9UBR1 384 aa4.49□□□□□ -1.69
CCNL1-215ENST00000474539 ADAM21Q9UKJ8 722 aa4.49□□□□□ -1.69
CCNL1-215ENST00000474539 ANKRD36CQ5JPF3 1778 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 MAGEB17A8MXT2 336 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 ZNF185O15231 689 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 KRT36O76013 467 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 ABLIM3O94929 683 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 CRYABP02511 175 aaKnown RBP4.48□□□□□ -1.69
CCNL1-215ENST00000474539 C2P06681 752 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 UBL4AP11441 157 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 ZNF28P17035 718 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 IMPDH1P20839 514 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 ITPKAP23677 461 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 ACRV1P26436 265 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 HMGCLP35914 325 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 TSFMP43897 325 aaKnown RBP4.48□□□□□ -1.69
CCNL1-215ENST00000474539 RPS9P46781 194 aaKnown RBP4.48□□□□□ -1.69
CCNL1-215ENST00000474539 NCBP2P52298 156 aaKnown RBP eCLIP4.48□□□□□ -1.696e-8■■■■■ 36.7
CCNL1-215ENST00000474539 POLR2JP52435 117 aaKnown RBP4.48□□□□□ -1.69
CCNL1-215ENST00000474539 SMSP52788 366 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 SLC18A1P54219 525 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 ERVK-8P63133 956 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 GALK2Q01415 458 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 CCDC142Q17RM4 750 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 KLHL22Q53GT1 634 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 SIRPB2Q5JXA9 342 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 TYW3Q6IPR3 259 aaKnown RBP4.48□□□□□ -1.69
CCNL1-215ENST00000474539 AGTRAPQ6RW13 159 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 OFCC1Q8IZS5 231 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 C17orf53Q8N3J3 647 aaPredicted RBP4.48□□□□□ -1.69
CCNL1-215ENST00000474539 DHRSXQ8N5I4 330 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 OR14A16Q8NHC5 309 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 PROKR1Q8TCW9 393 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 KCTD4Q8WVF5 259 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 CNDP2Q96KP4 475 aaKnown RBP4.48□□□□□ -1.69
CCNL1-215ENST00000474539 ZFRQ96KR1 1074 aaKnown RBP4.48□□□□□ -1.69
CCNL1-215ENST00000474539 APOLD1Q96LR9 279 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 FAM118BQ9BPY3 351 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 RTKNQ9BST9 563 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 TBC1D10AQ9BXI6 508 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 CEP41Q9BYV8 373 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 IL1RL2Q9HB29 575 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 ATP13A2Q9NQ11 1180 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 RBM7Q9Y580 266 aaKnown RBP4.48□□□□□ -1.69
CCNL1-215ENST00000474539 NUMBLQ9Y6R0 609 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 CCDC187A0A096LP49 1063 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 A0A096LPI6 279 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 A0A1W2PQ72 361 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 EFCAB10A6NFE3 127 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 ENO4A6NNW6 628 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 EFCAB7A8K855 629 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 IDSB3KWA1 339 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 H3BQ06 376 aaPredicted RBP4.48□□□□□ -1.69
CCNL1-215ENST00000474539 KLRC4-KLRK1H3BQV0 150 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 PDLIM1O00151 329 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 HTRA2O43464 458 aaPredicted RBP4.48□□□□□ -1.69
CCNL1-215ENST00000474539 OR10H3O60404 316 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 ATG12O94817 140 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 PENKP01210 267 aaPredicted RBP4.48□□□□□ -1.69
CCNL1-215ENST00000474539 HLA-DQB2P05538 268 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 ANXA8P13928 327 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 DDCP20711 480 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 SLC6A6P31641 620 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 GJA4P35212 333 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 BCAP31P51572 246 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 KCNQ1P51787 676 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 EMP2P54851 167 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 TAS2R40P59535 323 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 MRPS35P82673 323 aaKnown RBP4.48□□□□□ -1.69
CCNL1-215ENST00000474539 FADDQ13158 208 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 ILKQ13418 452 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 ZNF234Q14588 700 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 QPCTQ16769 361 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 LIN52Q52LA3 116 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 TRIM61Q5EBN2 209 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 FIGLAQ6QHK4 219 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 NPNTQ6UXI9 565 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 ADAMTSL4Q6UY14 1074 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 KIAA0907Q7Z7F0 614 aaPredicted RBP4.48□□□□□ -1.69
CCNL1-215ENST00000474539 GPAT4Q86UL3 456 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 C8orf59Q8N0T1 100 aaPredicted RBP4.48□□□□□ -1.69
CCNL1-215ENST00000474539 CPEB3Q8NE35 698 aaKnown RBP4.48□□□□□ -1.69
CCNL1-215ENST00000474539 OR2T12Q8NG77 320 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 UTP15Q8TED0 518 aaKnown RBP4.48□□□□□ -1.69
CCNL1-215ENST00000474539 WDR60Q8WVS4 1066 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 JPH3Q8WXH2 748 aaPredicted RBP4.48□□□□□ -1.69
CCNL1-215ENST00000474539 TFAP2BQ92481 460 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 DDIT4LQ96D03 193 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 HSPA12BQ96MM6 686 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 FUCA2Q9BTY2 467 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 C10orf88Q9H8K7 445 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 PARPBPQ9NWS1 579 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 CDH22Q9UJ99 828 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 RRP15Q9Y3B9 282 aaKnown RBP4.48□□□□□ -1.69
CCNL1-215ENST00000474539 OARD1Q9Y530 152 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 CSNK1G3Q9Y6M4 447 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 COL18A1P39060 1754 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms