RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-223ENST00000473345 C8orf89P0DMQ9 161 aa9.07□□□□□ -0.96
MCF2L-223ENST00000473345 PTGER1P34995 402 aa9.07□□□□□ -0.96
MCF2L-223ENST00000473345 EMP3P54852 163 aa9.07□□□□□ -0.96
MCF2L-223ENST00000473345 RWDD2BP57060 319 aa9.07□□□□□ -0.96
MCF2L-223ENST00000473345 CDH17Q12864 832 aa9.07□□□□□ -0.96
MCF2L-223ENST00000473345 OR1C1Q15619 314 aa9.07□□□□□ -0.96
MCF2L-223ENST00000473345 OASLQ15646 514 aaKnown RBP9.07□□□□□ -0.96
MCF2L-223ENST00000473345 BTBD16Q32M84 506 aa9.07□□□□□ -0.96
MCF2L-223ENST00000473345 RAD9BQ6WBX8 426 aa9.07□□□□□ -0.96
MCF2L-223ENST00000473345 MEX3BQ6ZN04 569 aaKnown RBP9.07□□□□□ -0.96
MCF2L-223ENST00000473345 GALNTL5Q7Z4T8 443 aa9.07□□□□□ -0.96
MCF2L-223ENST00000473345 CPEB2Q7Z5Q1 589 aaKnown RBP9.07□□□□□ -0.96
MCF2L-223ENST00000473345 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.07□□□□□ -0.96
MCF2L-223ENST00000473345 ANKRD37Q7Z713 158 aa9.07□□□□□ -0.96
MCF2L-223ENST00000473345 CCDC170Q8IYT3 715 aa9.07□□□□□ -0.96
MCF2L-223ENST00000473345 CPSF7Q8N684 471 aaKnown RBP9.07□□□□□ -0.96
MCF2L-223ENST00000473345 GIMAP7Q8NHV1 300 aa9.07□□□□□ -0.96
MCF2L-223ENST00000473345 TSLPQ969D9 159 aa9.07□□□□□ -0.96
MCF2L-223ENST00000473345 SPOCK3Q9BQ16 436 aa9.07□□□□□ -0.96
MCF2L-223ENST00000473345 RBCK1Q9BYM8 510 aa9.07□□□□□ -0.96
MCF2L-223ENST00000473345 UCK2Q9BZX2 261 aa9.07□□□□□ -0.96
MCF2L-223ENST00000473345 RUBCNLQ9H714 662 aa9.07□□□□□ -0.96
MCF2L-223ENST00000473345 MKKSQ9NPJ1 570 aaPredicted RBP9.07□□□□□ -0.96
MCF2L-223ENST00000473345 CATSPERZQ9NTU4 200 aa9.07□□□□□ -0.96
MCF2L-223ENST00000473345 C14orf105Q9NVL8 296 aa9.07□□□□□ -0.96
MCF2L-223ENST00000473345 HCN3Q9P1Z3 774 aa9.07□□□□□ -0.96
MCF2L-223ENST00000473345 TAC3Q9UHF0 121 aa9.07□□□□□ -0.96
MCF2L-223ENST00000473345 PCYOX1Q9UHG3 505 aa9.07□□□□□ -0.96
MCF2L-223ENST00000473345 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.07□□□□□ -0.96
MCF2L-223ENST00000473345 CACNA1CQ13936 2221 aa9.07□□□□□ -0.96
MCF2L-223ENST00000473345 CTAGE15A4D2H0 777 aa9.06□□□□□ -0.96
MCF2L-223ENST00000473345 E7ENX8 843 aa9.06□□□□□ -0.96
MCF2L-223ENST00000473345 SGK494L7N484 410 aa9.06□□□□□ -0.96
MCF2L-223ENST00000473345 MYO1CO00159 1063 aa9.06□□□□□ -0.96
MCF2L-223ENST00000473345 CD3EAPO15446 510 aaKnown RBP9.06□□□□□ -0.96
MCF2L-223ENST00000473345 ASNA1O43681 348 aa9.06□□□□□ -0.96
MCF2L-223ENST00000473345 TJP3O95049 919 aa9.06□□□□□ -0.96
MCF2L-223ENST00000473345 FKBP9O95302 570 aa9.06□□□□□ -0.96
MCF2L-223ENST00000473345 ESRRAP11474 423 aaPredicted RBP9.06□□□□□ -0.96
MCF2L-223ENST00000473345 IL1RNP18510 177 aa9.06□□□□□ -0.96
MCF2L-223ENST00000473345 RPS3P23396 243 aaKnown RBP eCLIP9.06□□□□□ -0.96
MCF2L-223ENST00000473345 CXCR2P25025 360 aa9.06□□□□□ -0.96
MCF2L-223ENST00000473345 ADRA1DP25100 572 aa9.06□□□□□ -0.96
MCF2L-223ENST00000473345 EIF3BP55884 814 aaKnown RBP9.06□□□□□ -0.96
MCF2L-223ENST00000473345 TAP2Q03519 686 aa9.06□□□□□ -0.96
MCF2L-223ENST00000473345 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.06□□□□□ -0.96
MCF2L-223ENST00000473345 FASTKD1Q53R41 847 aaKnown RBP9.06□□□□□ -0.96
MCF2L-223ENST00000473345 ICE2Q659A1 982 aa9.06□□□□□ -0.96
MCF2L-223ENST00000473345 PLAG1Q6DJT9 500 aa9.06□□□□□ -0.96
MCF2L-223ENST00000473345 PTRHD1Q6GMV3 140 aaKnown RBP9.06□□□□□ -0.96
MCF2L-223ENST00000473345 CTAGE6Q86UF2 777 aa9.06□□□□□ -0.96
MCF2L-223ENST00000473345 MMP21Q8N119 569 aa9.06□□□□□ -0.96
MCF2L-223ENST00000473345 DNAAF3Q8N9W5 541 aa9.06□□□□□ -0.96
MCF2L-223ENST00000473345 ACRBPQ8NEB7 543 aa9.06□□□□□ -0.96
MCF2L-223ENST00000473345 OR5T3Q8NGG3 340 aa9.06□□□□□ -0.96
MCF2L-223ENST00000473345 OR9A1PQ8NGU1 263 aa9.06□□□□□ -0.96
MCF2L-223ENST00000473345 ZNF480Q8WV37 535 aa9.06□□□□□ -0.96
MCF2L-223ENST00000473345 LPGAT1Q92604 370 aa9.06□□□□□ -0.96
MCF2L-223ENST00000473345 SDCCAG3Q96C92 435 aa9.06□□□□□ -0.96
MCF2L-223ENST00000473345 MVB12AQ96EY5 273 aa9.06□□□□□ -0.96
MCF2L-223ENST00000473345 TUBB6Q9BUF5 446 aa9.06□□□□□ -0.96
MCF2L-223ENST00000473345 RAB11FIP5Q9BXF6 653 aa9.06□□□□□ -0.96
MCF2L-223ENST00000473345 DRC3Q9H069 523 aa9.06□□□□□ -0.96
MCF2L-223ENST00000473345 LIME1Q9H400 295 aa9.06□□□□□ -0.96
MCF2L-223ENST00000473345 MRPS30Q9NP92 439 aaKnown RBP9.06□□□□□ -0.96
MCF2L-223ENST00000473345 LANCL2Q9NS86 450 aa9.06□□□□□ -0.96
MCF2L-223ENST00000473345 SPATA7Q9P0W8 599 aa9.06□□□□□ -0.96
MCF2L-223ENST00000473345 TNFRSF10DQ9UBN6 386 aa9.06□□□□□ -0.96
MCF2L-223ENST00000473345 EPN1Q9Y6I3 576 aaPredicted RBP9.06□□□□□ -0.96
MCF2L-223ENST00000473345 ITPR3Q14573 2671 aa9.06□□□□□ -0.96
MCF2L-223ENST00000473345 NKX2-6A6NCS4 301 aa9.05□□□□□ -0.96
MCF2L-223ENST00000473345 GABRR3A8MPY1 467 aa9.05□□□□□ -0.96
MCF2L-223ENST00000473345 KDM1AO60341 852 aa9.05□□□□□ -0.96
MCF2L-223ENST00000473345 PSIP1O75475 530 aaKnown RBP9.05□□□□□ -0.96
MCF2L-223ENST00000473345 CDC123O75794 336 aaPredicted RBP9.05□□□□□ -0.96
MCF2L-223ENST00000473345 SLC16A8O95907 504 aa9.05□□□□□ -0.96
MCF2L-223ENST00000473345 FTCDO95954 541 aa9.05□□□□□ -0.96
MCF2L-223ENST00000473345 RPN2P04844 631 aa9.05□□□□□ -0.96
MCF2L-223ENST00000473345 ERVK-10P10266 1014 aa9.05□□□□□ -0.96
MCF2L-223ENST00000473345 CMPK1P30085 196 aa9.05□□□□□ -0.96
MCF2L-223ENST00000473345 FMO4P31512 558 aa9.05□□□□□ -0.96
MCF2L-223ENST00000473345 COILP38432 576 aaPredicted RBP9.05□□□□□ -0.96
MCF2L-223ENST00000473345 RFC3P40938 356 aa9.05□□□□□ -0.96
MCF2L-223ENST00000473345 PRAMEP78395 509 aa9.05□□□□□ -0.96
MCF2L-223ENST00000473345 RHAGQ02094 409 aa9.05□□□□□ -0.96
MCF2L-223ENST00000473345 ALDH6A1Q02252 535 aaKnown RBP9.05□□□□□ -0.96
MCF2L-223ENST00000473345 PRDX1Q06830 199 aaKnown RBP9.05□□□□□ -0.96
MCF2L-223ENST00000473345 TSTA3Q13630 321 aaPredicted RBP9.05□□□□□ -0.96
MCF2L-223ENST00000473345 KLHL38Q2WGJ6 581 aa9.05□□□□□ -0.96
MCF2L-223ENST00000473345 P3H1Q32P28 736 aa9.05□□□□□ -0.96
MCF2L-223ENST00000473345 EMC4Q5J8M3 183 aa9.05□□□□□ -0.96
MCF2L-223ENST00000473345 MTFR2Q6P444 385 aa9.05□□□□□ -0.96
MCF2L-223ENST00000473345 ZNF662Q6ZS27 426 aa9.05□□□□□ -0.96
MCF2L-223ENST00000473345 KCT2Q8NC54 265 aa9.05□□□□□ -0.96
MCF2L-223ENST00000473345 OR51Q1Q8NH59 317 aa9.05□□□□□ -0.96
MCF2L-223ENST00000473345 SKA2Q8WVK7 121 aaPredicted RBP9.05□□□□□ -0.96
MCF2L-223ENST00000473345 MFSD3Q96ES6 412 aa9.05□□□□□ -0.96
MCF2L-223ENST00000473345 VPS50Q96JG6 964 aa9.05□□□□□ -0.96
MCF2L-223ENST00000473345 MAGED4Q96JG8 741 aa9.05□□□□□ -0.96
MCF2L-223ENST00000473345 PPP1R2P1Q96PQ5 205 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms