RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 LINC00479Q96M42 142 aa4.84□□□□□ -1.63
CLK1-209ENST00000472679 GDAP1L1Q96MZ0 367 aa4.84□□□□□ -1.63
CLK1-209ENST00000472679 FAM218AQ96MZ4 157 aa4.84□□□□□ -1.63
CLK1-209ENST00000472679 GBP5Q96PP8 586 aa4.84□□□□□ -1.63
CLK1-209ENST00000472679 CDCA3Q99618 268 aaPredicted RBP4.84□□□□□ -1.63
CLK1-209ENST00000472679 FERMT1Q9BQL6 677 aa4.84□□□□□ -1.63
CLK1-209ENST00000472679 DGCR6LQ9BY27 220 aa4.84□□□□□ -1.63
CLK1-209ENST00000472679 EGLN3Q9H6Z9 239 aa4.84□□□□□ -1.63
CLK1-209ENST00000472679 ZDHHC18Q9NUE0 388 aa4.84□□□□□ -1.63
CLK1-209ENST00000472679 F8VVB4 439 aa4.83□□□□□ -1.64
CLK1-209ENST00000472679 F8VWA3 439 aa4.83□□□□□ -1.64
CLK1-209ENST00000472679 NXPH2O95156 264 aa4.83□□□□□ -1.64
CLK1-209ENST00000472679 SERPINB2P05120 415 aa4.83□□□□□ -1.64
CLK1-209ENST00000472679 ZFYP08048 801 aaPredicted RBP4.83□□□□□ -1.64
CLK1-209ENST00000472679 RNF224P0DH78 156 aa4.83□□□□□ -1.64
CLK1-209ENST00000472679 SPP1P10451 314 aa4.83□□□□□ -1.64
CLK1-209ENST00000472679 CD59P13987 128 aa4.83□□□□□ -1.64
CLK1-209ENST00000472679 EPORP19235 508 aa4.83□□□□□ -1.64
CLK1-209ENST00000472679 HILS1P60008 231 aa4.83□□□□□ -1.64
CLK1-209ENST00000472679 GUCY2DQ02846 1103 aa4.83□□□□□ -1.64
CLK1-209ENST00000472679 EFTUD2Q15029 972 aaKnown RBP eCLIP4.83□□□□□ -1.64
CLK1-209ENST00000472679 PTPN14Q15678 1187 aa4.83□□□□□ -1.64
CLK1-209ENST00000472679 RBBP7Q16576 425 aa4.83□□□□□ -1.64
CLK1-209ENST00000472679 CYB5D1Q6P9G0 228 aa4.83□□□□□ -1.64
CLK1-209ENST00000472679 BTNL8Q6UX41 500 aa4.83□□□□□ -1.64
CLK1-209ENST00000472679 SPATA21Q7Z572 469 aa4.83□□□□□ -1.64
CLK1-209ENST00000472679 CPEB2Q7Z5Q1 589 aaKnown RBP4.83□□□□□ -1.64
CLK1-209ENST00000472679 PIGWQ7Z7B1 504 aa4.83□□□□□ -1.64
CLK1-209ENST00000472679 GLRX5Q86SX6 157 aa4.83□□□□□ -1.64
CLK1-209ENST00000472679 AMIGO1Q86WK6 493 aa4.83□□□□□ -1.64
CLK1-209ENST00000472679 OR6S1Q8NH40 331 aa4.83□□□□□ -1.64
CLK1-209ENST00000472679 MAPK15Q8TD08 544 aa4.83□□□□□ -1.64
CLK1-209ENST00000472679 ZNRF4Q8WWF5 429 aa4.83□□□□□ -1.64
CLK1-209ENST00000472679 EXOC4Q96A65 974 aa4.83□□□□□ -1.64
CLK1-209ENST00000472679 C2orf48Q96LS8 159 aa4.83□□□□□ -1.64
CLK1-209ENST00000472679 SYT11Q9BT88 431 aa4.83□□□□□ -1.64
CLK1-209ENST00000472679 RAB9BQ9NP90 201 aa4.83□□□□□ -1.64
CLK1-209ENST00000472679 PRDM4Q9UKN5 801 aa4.83□□□□□ -1.64
CLK1-209ENST00000472679 IGKV3D-15A0A087WSY6 115 aa4.82□□□□□ -1.64
CLK1-209ENST00000472679 TRAV34A0A0B4J273 112 aa4.82□□□□□ -1.64
CLK1-209ENST00000472679 HTR3EA5X5Y0 456 aa4.82□□□□□ -1.64
CLK1-209ENST00000472679 H0YAE9 185 aa4.82□□□□□ -1.64
CLK1-209ENST00000472679 ZNF500O60304 480 aaPredicted RBP4.82□□□□□ -1.64
CLK1-209ENST00000472679 EIF5BO60841 1220 aaKnown RBP4.82□□□□□ -1.64
CLK1-209ENST00000472679 FCGR3BO75015 233 aa4.82□□□□□ -1.64
CLK1-209ENST00000472679 KRT33AO76009 404 aa4.82□□□□□ -1.64
CLK1-209ENST00000472679 HOXC13P31276 330 aa4.82□□□□□ -1.64
CLK1-209ENST00000472679 SFTPDP35247 375 aa4.82□□□□□ -1.64
CLK1-209ENST00000472679 CETN2P41208 172 aa4.82□□□□□ -1.64
CLK1-209ENST00000472679 OR3A2P47893 321 aa4.82□□□□□ -1.64
CLK1-209ENST00000472679 VEGFCP49767 419 aa4.82□□□□□ -1.64
CLK1-209ENST00000472679 TRA2AQ13595 282 aaKnown RBP eCLIP4.82□□□□□ -1.64
CLK1-209ENST00000472679 CDH18Q13634 790 aa4.82□□□□□ -1.64
CLK1-209ENST00000472679 SHEQ5VZ18 495 aa4.82□□□□□ -1.64
CLK1-209ENST00000472679 SLC24A5Q71RS6 500 aa4.82□□□□□ -1.64
CLK1-209ENST00000472679 METTL23Q86XA0 190 aa4.82□□□□□ -1.64
CLK1-209ENST00000472679 FAM89BQ8N5H3 189 aa4.82□□□□□ -1.64
CLK1-209ENST00000472679 CCDC63Q8NA47 563 aa4.82□□□□□ -1.64
CLK1-209ENST00000472679 RBM41Q96IZ5 413 aaKnown RBP4.82□□□□□ -1.64
CLK1-209ENST00000472679 BTBD9Q96Q07 612 aa4.82□□□□□ -1.64
CLK1-209ENST00000472679 INPP5KQ9BT40 448 aa4.82□□□□□ -1.64
CLK1-209ENST00000472679 NYXQ9GZU5 481 aa4.82□□□□□ -1.64
CLK1-209ENST00000472679 LMAN1LQ9HAT1 526 aa4.82□□□□□ -1.64
CLK1-209ENST00000472679 SPHK2Q9NRA0 654 aa4.82□□□□□ -1.64
CLK1-209ENST00000472679 MYH15Q9Y2K3 1946 aa4.82□□□□□ -1.64
CLK1-209ENST00000472679 IGLV7-46A0A075B6I9 117 aa4.81□□□□□ -1.64
CLK1-209ENST00000472679 MEX3AA1L020 520 aaKnown RBP4.81□□□□□ -1.64
CLK1-209ENST00000472679 C5orf52A6NGY3 159 aa4.81□□□□□ -1.64
CLK1-209ENST00000472679 PRSS46E5RG02 174 aa4.81□□□□□ -1.64
CLK1-209ENST00000472679 PPIP5K2O43314 1243 aa4.81□□□□□ -1.64
CLK1-209ENST00000472679 TBCAO75347 108 aaKnown RBP4.81□□□□□ -1.64
CLK1-209ENST00000472679 SCG2P13521 617 aa4.81□□□□□ -1.64
CLK1-209ENST00000472679 ELAVL4P26378 380 aaKnown RBP4.81□□□□□ -1.64
CLK1-209ENST00000472679 CDX1P47902 265 aaPredicted RBP4.81□□□□□ -1.64
CLK1-209ENST00000472679 SULT2A1Q06520 285 aa4.81□□□□□ -1.64
CLK1-209ENST00000472679 KRTAP27-1Q3LI81 207 aa4.81□□□□□ -1.64
CLK1-209ENST00000472679 MPP7Q5T2T1 576 aa4.81□□□□□ -1.64
CLK1-209ENST00000472679 BSPRYQ5W0U4 402 aa4.81□□□□□ -1.64
CLK1-209ENST00000472679 TTC27Q6P3X3 843 aa4.81□□□□□ -1.64
CLK1-209ENST00000472679 FCRLAQ7L513 359 aa4.81□□□□□ -1.64
CLK1-209ENST00000472679 CATSPERDQ86XM0 798 aa4.81□□□□□ -1.64
CLK1-209ENST00000472679 GBP7Q8N8V2 638 aaPredicted RBP4.81□□□□□ -1.64
CLK1-209ENST00000472679 ZNF519Q8TB69 540 aa4.81□□□□□ -1.64
CLK1-209ENST00000472679 SLCO2A1Q92959 643 aa4.81□□□□□ -1.64
CLK1-209ENST00000472679 MOCOSQ96EN8 888 aa4.81□□□□□ -1.64
CLK1-209ENST00000472679 C18orf12Q96KH6 178 aa4.81□□□□□ -1.64
CLK1-209ENST00000472679 ZNF300Q96RE9 604 aaPredicted RBP4.81□□□□□ -1.64
CLK1-209ENST00000472679 KRT12Q99456 494 aa4.81□□□□□ -1.64
CLK1-209ENST00000472679 POMT1Q9Y6A1 747 aa4.81□□□□□ -1.64
CLK1-209ENST00000472679 IL16Q14005 1332 aa4.8□□□□□ -1.64
CLK1-209ENST00000472679 A0A1B0GU03 582 aa4.8□□□□□ -1.64
CLK1-209ENST00000472679 NDUFAF8A1L188 74 aa4.8□□□□□ -1.64
CLK1-209ENST00000472679 GLTPD2A6NH11 291 aa4.8□□□□□ -1.64
CLK1-209ENST00000472679 KRTAP16-1A8MUX0 517 aa4.8□□□□□ -1.64
CLK1-209ENST00000472679 H3BMM5 538 aa4.8□□□□□ -1.64
CLK1-209ENST00000472679 PGLSO95336 258 aa4.8□□□□□ -1.64
CLK1-209ENST00000472679 IGHEP01854 428 aa4.8□□□□□ -1.64
CLK1-209ENST00000472679 PRKAR1AP10644 381 aa4.8□□□□□ -1.64
CLK1-209ENST00000472679 DPEP1P16444 411 aa4.8□□□□□ -1.64
CLK1-209ENST00000472679 TIA1P31483 386 aaKnown RBP eCLIP4.8□□□□□ -1.646e-7■■□□□ 13.4
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms