RNA–Protein interactions for RNA: ENST00000470886.1

RRP1B-202, Transcript of ribosomal RNA processing 1B, humanhuman

TSL 2

Gene RRP1B, Length 4,634 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-202ENST00000470886 GLUD1P00367 558 aa10.23□□□□□ -0.77
RRP1B-202ENST00000470886 GNRH1P01148 92 aa10.23□□□□□ -0.77
RRP1B-202ENST00000470886 LAMP2P13473 410 aa10.23□□□□□ -0.77
RRP1B-202ENST00000470886 SMSP52788 366 aa10.23□□□□□ -0.77
RRP1B-202ENST00000470886 PPP5CP53041 499 aa10.23□□□□□ -0.77
RRP1B-202ENST00000470886 C1QTNF8P60827 252 aa10.23□□□□□ -0.77
RRP1B-202ENST00000470886 TARDBPQ13148 414 aaKnown RBP eCLIP10.23□□□□□ -0.77
RRP1B-202ENST00000470886 CHERPQ8IWX8 916 aaKnown RBP10.23□□□□□ -0.77
RRP1B-202ENST00000470886 MEIOBQ8N635 442 aa10.23□□□□□ -0.77
RRP1B-202ENST00000470886 NCSTNQ92542 709 aa10.23□□□□□ -0.77
RRP1B-202ENST00000470886 RERGQ96A58 199 aaPredicted RBP10.23□□□□□ -0.77
RRP1B-202ENST00000470886 TMEM125Q96AQ2 219 aa10.23□□□□□ -0.77
RRP1B-202ENST00000470886 MTERF1Q99551 399 aaKnown RBP10.23□□□□□ -0.77
RRP1B-202ENST00000470886 SMAD5Q99717 465 aaKnown RBP10.23□□□□□ -0.77
RRP1B-202ENST00000470886 TNKS2Q9H2K2 1166 aa10.23□□□□□ -0.77
RRP1B-202ENST00000470886 TVP23BQ9NYZ1 205 aa10.23□□□□□ -0.77
RRP1B-202ENST00000470886 GIMAP2Q9UG22 337 aa10.23□□□□□ -0.77
RRP1B-202ENST00000470886 PCTPQ9UKL6 214 aa10.23□□□□□ -0.77
RRP1B-202ENST00000470886 TRBC2A0A5B9 178 aa10.23□□□□□ -0.77
RRP1B-202ENST00000470886 NT5C1B-RDH14C9J2C7 533 aa10.23□□□□□ -0.77
RRP1B-202ENST00000470886 NEDD8-MDP1E9PL57 170 aa10.23□□□□□ -0.77
RRP1B-202ENST00000470886 CCRL2O00421 344 aa10.23□□□□□ -0.77
RRP1B-202ENST00000470886 SNX4O95219 450 aa10.23□□□□□ -0.77
RRP1B-202ENST00000470886 LATS1O95835 1130 aa10.23□□□□□ -0.77
RRP1B-202ENST00000470886 TBX18O95935 607 aa10.23□□□□□ -0.77
RRP1B-202ENST00000470886 CSTF2P33240 577 aaKnown RBP eCLIP10.23□□□□□ -0.77
RRP1B-202ENST00000470886 OR4D2P58180 307 aa10.23□□□□□ -0.77
RRP1B-202ENST00000470886 PMS2P3Q13401 168 aa10.23□□□□□ -0.77
RRP1B-202ENST00000470886 TMEM220Q6QAJ8 160 aa10.23□□□□□ -0.77
RRP1B-202ENST00000470886 PRSS48Q7RTY5 328 aa10.23□□□□□ -0.77
RRP1B-202ENST00000470886 NUDT13Q86X67 352 aa10.23□□□□□ -0.77
RRP1B-202ENST00000470886 TMC8Q8IU68 726 aa10.23□□□□□ -0.77
RRP1B-202ENST00000470886 REM2Q8IYK8 340 aaPredicted RBP10.23□□□□□ -0.77
RRP1B-202ENST00000470886 COL26A1Q96A83 441 aa10.23□□□□□ -0.77
RRP1B-202ENST00000470886 CXorf40BQ96DE9 158 aa10.23□□□□□ -0.77
RRP1B-202ENST00000470886 LGALS12Q96DT0 336 aa10.23□□□□□ -0.77
RRP1B-202ENST00000470886 TMEM80Q96HE8 168 aa10.23□□□□□ -0.77
RRP1B-202ENST00000470886 WDR6Q9NNW5 1121 aaKnown RBP10.23□□□□□ -0.77
RRP1B-202ENST00000470886 TREX1Q9NSU2 369 aa10.23□□□□□ -0.77
RRP1B-202ENST00000470886 PAK1IP1Q9NWT1 392 aaPredicted RBP10.23□□□□□ -0.77
RRP1B-202ENST00000470886 MRPS33Q9Y291 106 aaKnown RBP10.23□□□□□ -0.77
RRP1B-202ENST00000470886 RNF11Q9Y3C5 154 aa10.23□□□□□ -0.77
RRP1B-202ENST00000470886 GLTPD2A6NH11 291 aa10.22□□□□□ -0.77
RRP1B-202ENST00000470886 OR2AG2A6NM03 316 aa10.22□□□□□ -0.77
RRP1B-202ENST00000470886 NOS1APO75052 506 aaPredicted RBP10.22□□□□□ -0.77
RRP1B-202ENST00000470886 CDK4P11802 303 aa10.22□□□□□ -0.77
RRP1B-202ENST00000470886 KDELR2P33947 212 aa10.22□□□□□ -0.77
RRP1B-202ENST00000470886 RPL4P36578 427 aaKnown RBP10.22□□□□□ -0.77
RRP1B-202ENST00000470886 PHC1P78364 1004 aa10.22□□□□□ -0.77
RRP1B-202ENST00000470886 BIKQ13323 160 aa10.22□□□□□ -0.77
RRP1B-202ENST00000470886 ZBTB6Q15916 424 aa10.22□□□□□ -0.77
RRP1B-202ENST00000470886 C11orf91Q3C1V1 193 aa10.22□□□□□ -0.77
RRP1B-202ENST00000470886 SLC36A3Q495N2 470 aa10.22□□□□□ -0.77
RRP1B-202ENST00000470886 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.22□□□□□ -0.77
RRP1B-202ENST00000470886 ZNF534Q76KX8 674 aa10.22□□□□□ -0.77
RRP1B-202ENST00000470886 VN1R5Q7Z5H4 357 aa10.22□□□□□ -0.77
RRP1B-202ENST00000470886 THOC6Q86W42 341 aaKnown RBP10.22□□□□□ -0.77
RRP1B-202ENST00000470886 CFAP206Q8IYR0 622 aa10.22□□□□□ -0.77
RRP1B-202ENST00000470886 ADGRG5Q8IZF4 528 aa10.22□□□□□ -0.77
RRP1B-202ENST00000470886 C1orf52Q8N6N3 182 aaKnown RBP10.22□□□□□ -0.77
RRP1B-202ENST00000470886 ZNF778Q96MU6 729 aa10.22□□□□□ -0.77
RRP1B-202ENST00000470886 FCRL4Q96PJ5 515 aa10.22□□□□□ -0.77
RRP1B-202ENST00000470886 FUNDC2Q9BWH2 189 aa10.22□□□□□ -0.77
RRP1B-202ENST00000470886 TTLL2Q9BWV7 592 aa10.22□□□□□ -0.77
RRP1B-202ENST00000470886 MARCH7Q9H992 704 aa10.22□□□□□ -0.77
RRP1B-202ENST00000470886 FARSBQ9NSD9 589 aaKnown RBP10.22□□□□□ -0.77
RRP1B-202ENST00000470886 ERVW-1Q9UQF0 538 aa10.22□□□□□ -0.77
RRP1B-202ENST00000470886 H3BMQ9 156 aa10.22□□□□□ -0.77
RRP1B-202ENST00000470886 B3GALNT1O75752 331 aa10.22□□□□□ -0.77
RRP1B-202ENST00000470886 HLA-DPB1P04440 258 aa10.22□□□□□ -0.77
RRP1B-202ENST00000470886 IFNA16P05015 189 aa10.22□□□□□ -0.77
RRP1B-202ENST00000470886 TFAP2AP05549 437 aa10.22□□□□□ -0.77
RRP1B-202ENST00000470886 AZGP1P25311 298 aaKnown RBP10.22□□□□□ -0.77
RRP1B-202ENST00000470886 STT3AP46977 705 aa10.22□□□□□ -0.77
RRP1B-202ENST00000470886 RPL34P49207 117 aaKnown RBP10.22□□□□□ -0.77
RRP1B-202ENST00000470886 SOX4Q06945 474 aaPredicted RBP10.22□□□□□ -0.77
RRP1B-202ENST00000470886 UXS1Q8NBZ7 420 aa10.22□□□□□ -0.77
RRP1B-202ENST00000470886 EXOSC8Q96B26 276 aaKnown RBP10.22□□□□□ -0.77
RRP1B-202ENST00000470886 COG8Q96MW5 612 aa10.22□□□□□ -0.77
RRP1B-202ENST00000470886 CITED4Q96RK1 184 aa10.22□□□□□ -0.77
RRP1B-202ENST00000470886 CCM2Q9BSQ5 444 aa10.22□□□□□ -0.77
RRP1B-202ENST00000470886 CCDC32Q9BV29 185 aa10.22□□□□□ -0.77
RRP1B-202ENST00000470886 MYOCOSA0A1B0GUC4 107 aa10.22□□□□□ -0.77
RRP1B-202ENST00000470886 PDCD5O14737 125 aa10.22□□□□□ -0.77
RRP1B-202ENST00000470886 PTTG1O95997 202 aa10.22□□□□□ -0.77
RRP1B-202ENST00000470886 CAPN3P20807 821 aa10.22□□□□□ -0.77
RRP1B-202ENST00000470886 KEAP1Q14145 624 aa10.22□□□□□ -0.77
RRP1B-202ENST00000470886 RCAN2Q14206 197 aa10.22□□□□□ -0.77
RRP1B-202ENST00000470886 TSTQ16762 297 aaKnown RBP10.22□□□□□ -0.77
RRP1B-202ENST00000470886 PTCHD3Q3KNS1 767 aa10.22□□□□□ -0.77
RRP1B-202ENST00000470886 ADGRD2Q7Z7M1 963 aa10.22□□□□□ -0.77
RRP1B-202ENST00000470886 CARM1Q86X55 608 aa10.22□□□□□ -0.77
RRP1B-202ENST00000470886 RGL4Q8IZJ4 473 aa10.22□□□□□ -0.77
RRP1B-202ENST00000470886 NSUN5Q96P11 429 aaKnown RBP10.22□□□□□ -0.77
RRP1B-202ENST00000470886 DOHHQ9BU89 302 aa10.22□□□□□ -0.77
RRP1B-202ENST00000470886 MRPS23Q9Y3D9 190 aaKnown RBP10.22□□□□□ -0.77
RRP1B-202ENST00000470886 PCDHGB5Q9Y5G0 923 aa10.22□□□□□ -0.77
RRP1B-202ENST00000470886 SPIN1Q9Y657 262 aaPredicted RBP10.22□□□□□ -0.77
RRP1B-202ENST00000470886 NOTOA8MTQ0 251 aa10.22□□□□□ -0.77
RRP1B-202ENST00000470886 CACNB4O00305 520 aaPredicted RBP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms