RNA–Protein interactions for RNA: ENST00000470115.1

GTF3C2-209, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 5

Gene GTF3C2, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-209ENST00000470115 YIPF2Q9BWQ6 316 aa15.59■□□□□ 0.09
GTF3C2-209ENST00000470115 PCBD2Q9H0N5 130 aa15.59■□□□□ 0.09
GTF3C2-209ENST00000470115 SLAMF7Q9NQ25 335 aa15.59■□□□□ 0.09
GTF3C2-209ENST00000470115 ZFATQ9P243 1243 aa15.59■□□□□ 0.09
GTF3C2-209ENST00000470115 TRPC4Q9UBN4 977 aa15.59■□□□□ 0.09
GTF3C2-209ENST00000470115 C3orf18Q9UK00 162 aa15.59■□□□□ 0.09
GTF3C2-209ENST00000470115 CORO1CQ9ULV4 474 aaPredicted RBP15.59■□□□□ 0.09
GTF3C2-209ENST00000470115 RP1L1Q8IWN7 2480 aaPredicted RBP15.58■□□□□ 0.09
GTF3C2-209ENST00000470115 IGLV3-12A0A075B6K2 115 aa15.58■□□□□ 0.08
GTF3C2-209ENST00000470115 A0A0A6YYC8 382 aaPredicted RBP15.58■□□□□ 0.08
GTF3C2-209ENST00000470115 E7ESA3 106 aa15.58■□□□□ 0.08
GTF3C2-209ENST00000470115 I3L1I5 382 aaPredicted RBP15.58■□□□□ 0.08
GTF3C2-209ENST00000470115 KLHL41O60662 606 aa15.58■□□□□ 0.08
GTF3C2-209ENST00000470115 HIST1H2AGP0C0S8 130 aaPredicted RBP15.58■□□□□ 0.08
GTF3C2-209ENST00000470115 HIST1H2ADP20671 130 aa15.58■□□□□ 0.08
GTF3C2-209ENST00000470115 SAT1P21673 171 aa15.58■□□□□ 0.08
GTF3C2-209ENST00000470115 SNRPNP63162 240 aaKnown RBP15.58■□□□□ 0.08
GTF3C2-209ENST00000470115 CSNK1G2P78368 415 aa15.58■□□□□ 0.08
GTF3C2-209ENST00000470115 INPP5JQ15735 1006 aaPredicted RBP15.58■□□□□ 0.08
GTF3C2-209ENST00000470115 ZXDCQ2QGD7 858 aaPredicted RBP15.58■□□□□ 0.08
GTF3C2-209ENST00000470115 TUBB8Q3ZCM7 444 aa15.58■□□□□ 0.08
GTF3C2-209ENST00000470115 GARNL3Q5VVW2 1013 aa15.58■□□□□ 0.08
GTF3C2-209ENST00000470115 ATCAYQ86WG3 371 aa15.58■□□□□ 0.08
GTF3C2-209ENST00000470115 C17orf64Q86WR6 236 aa15.58■□□□□ 0.08
GTF3C2-209ENST00000470115 EFCAB3Q8N7B9 438 aa15.58■□□□□ 0.08
GTF3C2-209ENST00000470115 AMER3Q8N944 861 aa15.58■□□□□ 0.08
GTF3C2-209ENST00000470115 OR11G2Q8NGC1 345 aa15.58■□□□□ 0.08
GTF3C2-209ENST00000470115 PNPLA2Q96AD5 504 aa15.58■□□□□ 0.08
GTF3C2-209ENST00000470115 MVB12AQ96EY5 273 aa15.58■□□□□ 0.08
GTF3C2-209ENST00000470115 HIST1H2AHQ96KK5 128 aa15.58■□□□□ 0.08
GTF3C2-209ENST00000470115 HIST1H2AJQ99878 128 aa15.58■□□□□ 0.08
GTF3C2-209ENST00000470115 MACROD1Q9BQ69 325 aa15.58■□□□□ 0.08
GTF3C2-209ENST00000470115 H2AFJQ9BTM1 129 aa15.58■□□□□ 0.08
GTF3C2-209ENST00000470115 SGPP1Q9BX95 441 aa15.58■□□□□ 0.08
GTF3C2-209ENST00000470115 DRC3Q9H069 523 aa15.58■□□□□ 0.08
GTF3C2-209ENST00000470115 DPH5Q9H2P9 285 aa15.58■□□□□ 0.08
GTF3C2-209ENST00000470115 ZBTB20Q9HC78 741 aaPredicted RBP15.58■□□□□ 0.08
GTF3C2-209ENST00000470115 MOCS1Q9NZB8 636 aa15.58■□□□□ 0.08
GTF3C2-209ENST00000470115 MRPS2Q9Y399 296 aaKnown RBP15.58■□□□□ 0.08
GTF3C2-209ENST00000470115 MAP4K5Q9Y4K4 846 aa15.58■□□□□ 0.08
GTF3C2-209ENST00000470115 LRRK2Q5S007 2527 aa15.57■□□□□ 0.08
GTF3C2-209ENST00000470115 KCNE1BA0A087WTH5 132 aa15.57■□□□□ 0.08
GTF3C2-209ENST00000470115 PRPF4O43172 522 aaKnown RBP eCLIP15.57■□□□□ 0.082e-8■■■□□ 15.8
GTF3C2-209ENST00000470115 ANXA5P08758 320 aa15.57■□□□□ 0.08
GTF3C2-209ENST00000470115 CDH1P12830 882 aa15.57■□□□□ 0.08
GTF3C2-209ENST00000470115 NPPBP16860 134 aa15.57■□□□□ 0.08
GTF3C2-209ENST00000470115 SLC26A3P40879 764 aa15.57■□□□□ 0.08
GTF3C2-209ENST00000470115 RPS15AP62244 130 aaKnown RBP15.57■□□□□ 0.08
GTF3C2-209ENST00000470115 CKAP4Q07065 602 aaKnown RBP15.57■□□□□ 0.08
GTF3C2-209ENST00000470115 PLEKHN1Q494U1 663 aaPredicted RBP15.57■□□□□ 0.08
GTF3C2-209ENST00000470115 PRR30Q53SZ7 412 aaPredicted RBP15.57■□□□□ 0.08
GTF3C2-209ENST00000470115 TMEM207Q6UWW9 146 aa15.57■□□□□ 0.08
GTF3C2-209ENST00000470115 IGFL3Q6UXB1 125 aa15.57■□□□□ 0.08
GTF3C2-209ENST00000470115 VN1R4Q7Z5H5 301 aa15.57■□□□□ 0.08
GTF3C2-209ENST00000470115 STRA8Q7Z7C7 330 aa15.57■□□□□ 0.08
GTF3C2-209ENST00000470115 ZC3HC1Q86WB0 502 aaKnown RBP15.57■□□□□ 0.08
GTF3C2-209ENST00000470115 ZBED8Q8IZ13 594 aa15.57■□□□□ 0.08
GTF3C2-209ENST00000470115 SPATA4Q8NEY3 305 aa15.57■□□□□ 0.08
GTF3C2-209ENST00000470115 PYCR2Q96C36 320 aa15.57■□□□□ 0.08
GTF3C2-209ENST00000470115 C8orf44Q96CB5 159 aa15.57■□□□□ 0.08
GTF3C2-209ENST00000470115 VPS50Q96JG6 964 aa15.57■□□□□ 0.08
GTF3C2-209ENST00000470115 ERP44Q9BS26 406 aa15.57■□□□□ 0.08
GTF3C2-209ENST00000470115 TRIM54Q9BYV2 358 aa15.57■□□□□ 0.08
GTF3C2-209ENST00000470115 ARL15Q9NXU5 204 aa15.57■□□□□ 0.08
GTF3C2-209ENST00000470115 IKZF3Q9UKT9 509 aa15.57■□□□□ 0.08
GTF3C2-209ENST00000470115 FEZF1A0PJY2 475 aa15.56■□□□□ 0.08
GTF3C2-209ENST00000470115 PABPN1LA6NDY0 278 aaKnown RBP15.56■□□□□ 0.08
GTF3C2-209ENST00000470115 FAM187AA6NFU0 413 aa15.56■□□□□ 0.08
GTF3C2-209ENST00000470115 IDSB3KWA1 339 aa15.56■□□□□ 0.08
GTF3C2-209ENST00000470115 NDC80O14777 642 aa15.56■□□□□ 0.08
GTF3C2-209ENST00000470115 RAD51CO43502 376 aa15.56■□□□□ 0.08
GTF3C2-209ENST00000470115 LCMT2O60294 686 aaKnown RBP15.56■□□□□ 0.08
GTF3C2-209ENST00000470115 VPS4BO75351 444 aa15.56■□□□□ 0.08
GTF3C2-209ENST00000470115 IPO13O94829 963 aaKnown RBP15.56■□□□□ 0.08
GTF3C2-209ENST00000470115 ACPPP15309 386 aa15.56■□□□□ 0.08
GTF3C2-209ENST00000470115 CCND1P24385 295 aa15.56■□□□□ 0.08
GTF3C2-209ENST00000470115 EMP2P54851 167 aa15.56■□□□□ 0.08
GTF3C2-209ENST00000470115 C2orf54Q08AI8 447 aa15.56■□□□□ 0.08
GTF3C2-209ENST00000470115 Q0VFX4 171 aa15.56■□□□□ 0.08
GTF3C2-209ENST00000470115 CBLBQ13191 982 aa15.56■□□□□ 0.08
GTF3C2-209ENST00000470115 FAM53BQ14153 422 aa15.56■□□□□ 0.08
GTF3C2-209ENST00000470115 UBAP2LQ14157 1087 aaKnown RBP15.56■□□□□ 0.08
GTF3C2-209ENST00000470115 NDUFA9Q16795 377 aa15.56■□□□□ 0.08
GTF3C2-209ENST00000470115 SYT16Q17RD7 645 aa15.56■□□□□ 0.08
GTF3C2-209ENST00000470115 ATG9BQ674R7 924 aa15.56■□□□□ 0.08
GTF3C2-209ENST00000470115 DUPD1Q68J44 220 aa15.56■□□□□ 0.08
GTF3C2-209ENST00000470115 CAPN13Q6MZZ7 669 aaPredicted RBP15.56■□□□□ 0.08
GTF3C2-209ENST00000470115 LCTLQ6UWM7 567 aa15.56■□□□□ 0.08
GTF3C2-209ENST00000470115 CAPN12Q6ZSI9 719 aa15.56■□□□□ 0.08
GTF3C2-209ENST00000470115 BBOF1Q8ND07 529 aa15.56■□□□□ 0.08
GTF3C2-209ENST00000470115 OR9A4Q8NGU2 314 aa15.56■□□□□ 0.08
GTF3C2-209ENST00000470115 PDLIM5Q96HC4 596 aaKnown RBP15.56■□□□□ 0.08
GTF3C2-209ENST00000470115 MKKSQ9NPJ1 570 aaPredicted RBP15.56■□□□□ 0.08
GTF3C2-209ENST00000470115 VPS4AQ9UN37 437 aa15.56■□□□□ 0.08
GTF3C2-209ENST00000470115 NUP210LQ5VU65 1888 aa15.56■□□□□ 0.08
GTF3C2-209ENST00000470115 PTPN13Q12923 2485 aa15.56■□□□□ 0.08
GTF3C2-209ENST00000470115 FAM95CA0A1B0GW59 222 aa15.55■□□□□ 0.08
GTF3C2-209ENST00000470115 PIAS1O75925 651 aa15.55■□□□□ 0.08
GTF3C2-209ENST00000470115 GUCA1CO95843 209 aa15.55■□□□□ 0.08
GTF3C2-209ENST00000470115 HEXBP07686 556 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms