RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 TUSC3Q13454 348 aa19.1■□□□□ 0.65
SDF4-205ENST00000465727 DUSP7Q16829 419 aa19.1■□□□□ 0.65
SDF4-205ENST00000465727 C5orf22Q49AR2 442 aa19.1■□□□□ 0.65
SDF4-205ENST00000465727 PDE12Q6L8Q7 609 aaKnown RBP19.1■□□□□ 0.65
SDF4-205ENST00000465727 TLK2Q86UE8 772 aa19.1■□□□□ 0.65
SDF4-205ENST00000465727 FAM124AQ86V42 546 aa19.1■□□□□ 0.65
SDF4-205ENST00000465727 MIB1Q86YT6 1006 aa19.1■□□□□ 0.65
SDF4-205ENST00000465727 WDFY2Q96P53 400 aa19.1■□□□□ 0.65
SDF4-205ENST00000465727 GON7Q9BXV9 100 aa19.1■□□□□ 0.65
SDF4-205ENST00000465727 RAD18Q9NS91 495 aa19.1■□□□□ 0.65
SDF4-205ENST00000465727 TSR3Q9UJK0 312 aaKnown RBP19.1■□□□□ 0.65
SDF4-205ENST00000465727 FNDC3AQ9Y2H6 1198 aaKnown RBP19.1■□□□□ 0.65
SDF4-205ENST00000465727 RAI2Q9Y5P3 530 aa19.1■□□□□ 0.65
SDF4-205ENST00000465727 SLC35F4A4IF30 521 aa19.1■□□□□ 0.65
SDF4-205ENST00000465727 KRT87PA6NCN2 255 aa19.1■□□□□ 0.65
SDF4-205ENST00000465727 MAGEB17A8MXT2 336 aa19.1■□□□□ 0.65
SDF4-205ENST00000465727 AP3D1O14617 1153 aa19.1■□□□□ 0.65
SDF4-205ENST00000465727 FPGTO14772 594 aa19.1■□□□□ 0.65
SDF4-205ENST00000465727 PDYNP01213 254 aa19.1■□□□□ 0.65
SDF4-205ENST00000465727 HSMCR30P0CW71 290 aa19.1■□□□□ 0.65
SDF4-205ENST00000465727 PRPS1L1P21108 318 aa19.1■□□□□ 0.65
SDF4-205ENST00000465727 TACR2P21452 398 aa19.1■□□□□ 0.65
SDF4-205ENST00000465727 ALDH9A1P49189 494 aa19.1■□□□□ 0.65
SDF4-205ENST00000465727 KCNJ10P78508 379 aa19.1■□□□□ 0.65
SDF4-205ENST00000465727 GGTA1PQ4G0N0 100 aa19.1■□□□□ 0.65
SDF4-205ENST00000465727 OR4F3Q6IEY1 312 aa19.1■□□□□ 0.65
SDF4-205ENST00000465727 KIAA1841Q6NSI8 718 aa19.1■□□□□ 0.65
SDF4-205ENST00000465727 ATCAYQ86WG3 371 aa19.1■□□□□ 0.65
SDF4-205ENST00000465727 SYNPOQ8N3V7 929 aa19.1■□□□□ 0.65
SDF4-205ENST00000465727 EFHBQ8N7U6 833 aa19.1■□□□□ 0.65
SDF4-205ENST00000465727 JPH3Q8WXH2 748 aaPredicted RBP19.1■□□□□ 0.65
SDF4-205ENST00000465727 NEDD4LQ96PU5 975 aa19.1■□□□□ 0.65
SDF4-205ENST00000465727 FEVQ99581 238 aa19.1■□□□□ 0.65
SDF4-205ENST00000465727 MGLLQ99685 303 aa19.1■□□□□ 0.65
SDF4-205ENST00000465727 KCNS3Q9BQ31 491 aa19.1■□□□□ 0.65
SDF4-205ENST00000465727 ZNF226Q9NYT6 803 aa19.1■□□□□ 0.65
SDF4-205ENST00000465727 CPA4Q9UI42 421 aa19.1■□□□□ 0.65
SDF4-205ENST00000465727 PCDHGA2Q9Y5H1 932 aa19.1■□□□□ 0.65
SDF4-205ENST00000465727 TRPV2Q9Y5S1 764 aa19.1■□□□□ 0.65
SDF4-205ENST00000465727 F5H5T6 163 aa19.09■□□□□ 0.65
SDF4-205ENST00000465727 GFRA2O00451 464 aa19.09■□□□□ 0.65
SDF4-205ENST00000465727 SUV39H1O43463 412 aa19.09■□□□□ 0.65
SDF4-205ENST00000465727 PRMT3O60678 531 aa19.09■□□□□ 0.65
SDF4-205ENST00000465727 STK16O75716 305 aa19.09■□□□□ 0.65
SDF4-205ENST00000465727 POMCP01189 267 aa19.09■□□□□ 0.65
SDF4-205ENST00000465727 IDH2P48735 452 aaKnown RBP19.09■□□□□ 0.65
SDF4-205ENST00000465727 IRF5Q13568 498 aa19.09■□□□□ 0.65
SDF4-205ENST00000465727 BOP1Q14137 746 aaKnown RBP19.09■□□□□ 0.65
SDF4-205ENST00000465727 SNAP47Q5SQN1 464 aa19.09■□□□□ 0.65
SDF4-205ENST00000465727 Q6ZPB1 254 aaPredicted RBP19.09■□□□□ 0.65
SDF4-205ENST00000465727 CSGALNACT1Q8TDX6 532 aa19.09■□□□□ 0.65
SDF4-205ENST00000465727 SELENOMQ8WWX9 145 aa19.09■□□□□ 0.65
SDF4-205ENST00000465727 SLC7A6Q92536 515 aa19.09■□□□□ 0.65
SDF4-205ENST00000465727 ELMO1Q92556 727 aa19.09■□□□□ 0.65
SDF4-205ENST00000465727 TTC9Q92623 222 aa19.09■□□□□ 0.65
SDF4-205ENST00000465727 TPD52L3Q96J77 140 aa19.09■□□□□ 0.65
SDF4-205ENST00000465727 DMRTB1Q96MA1 342 aa19.09■□□□□ 0.65
SDF4-205ENST00000465727 SMIM14Q96QK8 99 aa19.09■□□□□ 0.65
SDF4-205ENST00000465727 TMA7Q9Y2S6 64 aaKnown RBP19.09■□□□□ 0.65
SDF4-205ENST00000465727 SNX8Q9Y5X2 465 aa19.09■□□□□ 0.65
SDF4-205ENST00000465727 V9GYH0 126 aa19.09■□□□□ 0.65
SDF4-205ENST00000465727 SLC12A8A0AV02 714 aa19.09■□□□□ 0.65
SDF4-205ENST00000465727 SH3D21A4FU49 640 aa19.09■□□□□ 0.65
SDF4-205ENST00000465727 KDELR3O43731 214 aa19.09■□□□□ 0.65
SDF4-205ENST00000465727 B3GALT4O96024 378 aa19.09■□□□□ 0.65
SDF4-205ENST00000465727 ITGB1P05556 798 aa19.09■□□□□ 0.65
SDF4-205ENST00000465727 IL7P13232 177 aa19.09■□□□□ 0.65
SDF4-205ENST00000465727 TACR1P25103 407 aa19.09■□□□□ 0.65
SDF4-205ENST00000465727 CPT1AP50416 773 aa19.09■□□□□ 0.65
SDF4-205ENST00000465727 NUDT6P53370 316 aa19.09■□□□□ 0.65
SDF4-205ENST00000465727 SMUG1Q53HV7 270 aa19.09■□□□□ 0.65
SDF4-205ENST00000465727 MFSD4BQ5TF39 518 aa19.09■□□□□ 0.65
SDF4-205ENST00000465727 SIGIRRQ6IA17 410 aa19.09■□□□□ 0.65
SDF4-205ENST00000465727 NADSYN1Q6IA69 706 aa19.09■□□□□ 0.65
SDF4-205ENST00000465727 TMPRSS11AQ6ZMR5 421 aa19.09■□□□□ 0.65
SDF4-205ENST00000465727 GDPGP1Q6ZNW5 385 aa19.09■□□□□ 0.65
SDF4-205ENST00000465727 UTS2BQ765I0 119 aa19.09■□□□□ 0.65
SDF4-205ENST00000465727 ZNF438Q7Z4V0 828 aa19.09■□□□□ 0.65
SDF4-205ENST00000465727 GALNT10Q86SR1 603 aa19.09■□□□□ 0.65
SDF4-205ENST00000465727 CDCA5Q96FF9 252 aa19.09■□□□□ 0.65
SDF4-205ENST00000465727 MCCC1Q96RQ3 725 aaPredicted RBP19.09■□□□□ 0.65
SDF4-205ENST00000465727 TTYH2Q9BSA4 534 aa19.09■□□□□ 0.65
SDF4-205ENST00000465727 SLC22A4Q9H015 551 aa19.09■□□□□ 0.65
SDF4-205ENST00000465727 RPRD1BQ9NQG5 326 aaKnown RBP19.09■□□□□ 0.65
SDF4-205ENST00000465727 FAM120CQ9NX05 1096 aaKnown RBP19.09■□□□□ 0.65
SDF4-205ENST00000465727 PCDHB8Q9UN66 801 aa19.09■□□□□ 0.65
SDF4-205ENST00000465727 ACTL7AQ9Y615 435 aa19.09■□□□□ 0.65
SDF4-205ENST00000465727 TNFRSF11BO00300 401 aa19.08■□□□□ 0.64
SDF4-205ENST00000465727 TLR5O60602 858 aa19.08■□□□□ 0.64
SDF4-205ENST00000465727 TBX18O95935 607 aa19.08■□□□□ 0.64
SDF4-205ENST00000465727 PCDH1Q08174 1060 aa19.08■□□□□ 0.64
SDF4-205ENST00000465727 PPIGQ13427 754 aaKnown RBP eCLIP19.08■□□□□ 0.64
SDF4-205ENST00000465727 NFE2Q16621 373 aaPredicted RBP19.08■□□□□ 0.64
SDF4-205ENST00000465727 CPSF6Q16630 551 aaKnown RBP eCLIP19.08■□□□□ 0.64
SDF4-205ENST00000465727 GPAT3Q53EU6 434 aa19.08■□□□□ 0.64
SDF4-205ENST00000465727 CDKL4Q5MAI5 379 aa19.08■□□□□ 0.64
SDF4-205ENST00000465727 GPR142Q7Z601 462 aa19.08■□□□□ 0.64
SDF4-205ENST00000465727 RBFAQ8N0V3 343 aa19.08■□□□□ 0.64
SDF4-205ENST00000465727 OR7D4Q8NG98 312 aa19.08■□□□□ 0.64
SDF4-205ENST00000465727 OR10G2Q8NGC3 310 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms