RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 PGM2L1Q6PCE3 622 aa16.29■□□□□ 0.2
EXOSC3-203ENST00000465229 LRRC70Q7Z2Q7 622 aa16.29■□□□□ 0.2
EXOSC3-203ENST00000465229 OOSP2Q86WS3 158 aa16.29■□□□□ 0.2
EXOSC3-203ENST00000465229 FLVCR1-AS1Q8TAF5 88 aa16.29■□□□□ 0.2
EXOSC3-203ENST00000465229 CATSPER2Q96P56 530 aa16.29■□□□□ 0.2
EXOSC3-203ENST00000465229 OR2A14Q96R47 310 aa16.29■□□□□ 0.2
EXOSC3-203ENST00000465229 DNAJC11Q9NVH1 559 aa16.29■□□□□ 0.2
EXOSC3-203ENST00000465229 NDE1Q9NXR1 346 aa16.29■□□□□ 0.2
EXOSC3-203ENST00000465229 TAC3Q9UHF0 121 aa16.29■□□□□ 0.2
EXOSC3-203ENST00000465229 PCDHB11Q9Y5F2 797 aa16.29■□□□□ 0.2
EXOSC3-203ENST00000465229 ENTPD2Q9Y5L3 495 aa16.29■□□□□ 0.2
EXOSC3-203ENST00000465229 COPG1Q9Y678 874 aaKnown RBP16.29■□□□□ 0.2
EXOSC3-203ENST00000465229 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.29■□□□□ 0.2
EXOSC3-203ENST00000465229 CNOT1A5YKK6 2376 aaKnown RBP16.29■□□□□ 0.2
EXOSC3-203ENST00000465229 ISM1B1AKI9 464 aa16.28■□□□□ 0.2
EXOSC3-203ENST00000465229 PPP6CO00743 305 aa16.28■□□□□ 0.2
EXOSC3-203ENST00000465229 GFRA3O60609 400 aa16.28■□□□□ 0.2
EXOSC3-203ENST00000465229 ENTPD5O75356 428 aa16.28■□□□□ 0.2
EXOSC3-203ENST00000465229 SKAP2O75563 359 aaPredicted RBP16.28■□□□□ 0.2
EXOSC3-203ENST00000465229 EPORP19235 508 aa16.28■□□□□ 0.2
EXOSC3-203ENST00000465229 PPP1CAP62136 330 aa16.28■□□□□ 0.2
EXOSC3-203ENST00000465229 GPLD1P80108 840 aa16.28■□□□□ 0.2
EXOSC3-203ENST00000465229 SLC25A3Q00325 362 aa16.28■□□□□ 0.2
EXOSC3-203ENST00000465229 CFHR1Q03591 330 aa16.28■□□□□ 0.2
EXOSC3-203ENST00000465229 GTF2H2Q13888 395 aa16.28■□□□□ 0.2
EXOSC3-203ENST00000465229 CYLC2Q14093 348 aaPredicted RBP16.28■□□□□ 0.2
EXOSC3-203ENST00000465229 SQLEQ14534 574 aa16.28■□□□□ 0.2
EXOSC3-203ENST00000465229 PRAMEF13Q5VWM6 474 aa16.28■□□□□ 0.2
EXOSC3-203ENST00000465229 GTF2H2CQ6P1K8 395 aa16.28■□□□□ 0.2
EXOSC3-203ENST00000465229 LCTLQ6UWM7 567 aa16.28■□□□□ 0.2
EXOSC3-203ENST00000465229 LARP4Q71RC2 724 aaKnown RBP eCLIP16.28■□□□□ 0.2
EXOSC3-203ENST00000465229 GOLGA7Q7Z5G4 137 aa16.28■□□□□ 0.2
EXOSC3-203ENST00000465229 KIAA2013Q8IYS2 634 aa16.28■□□□□ 0.2
EXOSC3-203ENST00000465229 CHCHD4Q8N4Q1 142 aa16.28■□□□□ 0.2
EXOSC3-203ENST00000465229 SLC22A18Q96BI1 424 aa16.28■□□□□ 0.2
EXOSC3-203ENST00000465229 C19orf60Q96EN9 201 aa16.28■□□□□ 0.2
EXOSC3-203ENST00000465229 AHCYL2Q96HN2 611 aaKnown RBP16.28■□□□□ 0.2
EXOSC3-203ENST00000465229 PPP1R36Q96LQ0 422 aa16.28■□□□□ 0.2
EXOSC3-203ENST00000465229 CDC6Q99741 560 aa16.28■□□□□ 0.2
EXOSC3-203ENST00000465229 PCBD2Q9H0N5 130 aa16.28■□□□□ 0.2
EXOSC3-203ENST00000465229 EPB41L1Q9H4G0 881 aa16.28■□□□□ 0.2
EXOSC3-203ENST00000465229 MID1IP1Q9NPA3 183 aa16.28■□□□□ 0.2
EXOSC3-203ENST00000465229 ACTR10Q9NZ32 417 aa16.28■□□□□ 0.2
EXOSC3-203ENST00000465229 NOP53Q9NZM5 478 aaKnown RBP16.28■□□□□ 0.2
EXOSC3-203ENST00000465229 SH2B3Q9UQQ2 575 aa16.28■□□□□ 0.2
EXOSC3-203ENST00000465229 PIEZO1Q92508 2521 aa16.28■□□□□ 0.2
EXOSC3-203ENST00000465229 LOC100653049A0A140TA62 436 aa16.27■□□□□ 0.2
EXOSC3-203ENST00000465229 GSAPA4D1B5 854 aa16.27■□□□□ 0.2
EXOSC3-203ENST00000465229 C2orf74A8MZ97 194 aa16.27■□□□□ 0.2
EXOSC3-203ENST00000465229 UBDO15205 165 aa16.27■□□□□ 0.2
EXOSC3-203ENST00000465229 ZW10O43264 779 aa16.27■□□□□ 0.2
EXOSC3-203ENST00000465229 TNFSF14O43557 240 aa16.27■□□□□ 0.2
EXOSC3-203ENST00000465229 VPS4BO75351 444 aa16.27■□□□□ 0.2
EXOSC3-203ENST00000465229 KRT34O76011 436 aa16.27■□□□□ 0.2
EXOSC3-203ENST00000465229 EPB42P16452 691 aa16.27■□□□□ 0.2
EXOSC3-203ENST00000465229 UGT2B7P16662 529 aa16.27■□□□□ 0.2
EXOSC3-203ENST00000465229 TSPAN8P19075 237 aa16.27■□□□□ 0.2
EXOSC3-203ENST00000465229 ITGAXP20702 1163 aa16.27■□□□□ 0.2
EXOSC3-203ENST00000465229 PRDX3P30048 256 aaKnown RBP16.27■□□□□ 0.2
EXOSC3-203ENST00000465229 CCNG1P51959 295 aa16.27■□□□□ 0.2
EXOSC3-203ENST00000465229 CCL7P80098 99 aa16.27■□□□□ 0.2
EXOSC3-203ENST00000465229 PRDX1Q06830 199 aaKnown RBP16.27■□□□□ 0.2
EXOSC3-203ENST00000465229 SQSTM1Q13501 440 aa16.27■□□□□ 0.2
EXOSC3-203ENST00000465229 CUL3Q13618 768 aa16.27■□□□□ 0.2
EXOSC3-203ENST00000465229 KPNB1Q14974 876 aaKnown RBP16.27■□□□□ 0.2
EXOSC3-203ENST00000465229 MAPRE2Q15555 327 aa16.27■□□□□ 0.2
EXOSC3-203ENST00000465229 SF1Q15637 639 aaKnown RBP16.27■□□□□ 0.2
EXOSC3-203ENST00000465229 WLSQ5T9L3 541 aa16.27■□□□□ 0.2
EXOSC3-203ENST00000465229 TMEM198Q66K66 360 aa16.27■□□□□ 0.2
EXOSC3-203ENST00000465229 ARMC6Q6NXE6 501 aa16.27■□□□□ 0.2
EXOSC3-203ENST00000465229 USP53Q70EK8 1073 aa16.27■□□□□ 0.2
EXOSC3-203ENST00000465229 FAM20CQ8IXL6 584 aa16.27■□□□□ 0.2
EXOSC3-203ENST00000465229 SNX31Q8N9S9 440 aa16.27■□□□□ 0.2
EXOSC3-203ENST00000465229 NCSTNQ92542 709 aa16.27■□□□□ 0.2
EXOSC3-203ENST00000465229 CFAP54Q96N23 3096 aa16.27■□□□□ 0.2
EXOSC3-203ENST00000465229 RAB33BQ9H082 229 aa16.27■□□□□ 0.2
EXOSC3-203ENST00000465229 ABCG4Q9H172 646 aa16.27■□□□□ 0.2
EXOSC3-203ENST00000465229 SEMA4BQ9NPR2 832 aaPredicted RBP16.27■□□□□ 0.2
EXOSC3-203ENST00000465229 EPHA6Q9UF33 1036 aa16.27■□□□□ 0.2
EXOSC3-203ENST00000465229 SLC7A8Q9UHI5 535 aa16.27■□□□□ 0.2
EXOSC3-203ENST00000465229 PRPF19Q9UMS4 504 aaKnown RBP16.27■□□□□ 0.2
EXOSC3-203ENST00000465229 ANGPTL3Q9Y5C1 460 aa16.27■□□□□ 0.2
EXOSC3-203ENST00000465229 KCNE2Q9Y6J6 123 aa16.27■□□□□ 0.2
EXOSC3-203ENST00000465229 PCM1Q15154 2024 aa16.27■□□□□ 0.19
EXOSC3-203ENST00000465229 A0A1W2PQM1 296 aa16.27■□□□□ 0.19
EXOSC3-203ENST00000465229 DUX1O43812 170 aa16.27■□□□□ 0.19
EXOSC3-203ENST00000465229 PPM1FP49593 454 aaPredicted RBP16.27■□□□□ 0.19
EXOSC3-203ENST00000465229 ACTR3P61158 418 aa16.27■□□□□ 0.19
EXOSC3-203ENST00000465229 ICE2Q659A1 982 aa16.27■□□□□ 0.19
EXOSC3-203ENST00000465229 SPESP1Q6UW49 350 aa16.27■□□□□ 0.19
EXOSC3-203ENST00000465229 C16orf89Q6UX73 402 aa16.27■□□□□ 0.19
EXOSC3-203ENST00000465229 SNX32Q86XE0 403 aa16.27■□□□□ 0.19
EXOSC3-203ENST00000465229 HOMEZQ8IX15 550 aa16.27■□□□□ 0.19
EXOSC3-203ENST00000465229 OR2L3Q8NG85 312 aa16.27■□□□□ 0.19
EXOSC3-203ENST00000465229 TRPC4APQ8TEL6 797 aa16.27■□□□□ 0.19
EXOSC3-203ENST00000465229 WDR60Q8WVS4 1066 aa16.27■□□□□ 0.19
EXOSC3-203ENST00000465229 NEIL2Q969S2 332 aa16.27■□□□□ 0.19
EXOSC3-203ENST00000465229 PPM1MQ96MI6 270 aa16.27■□□□□ 0.19
EXOSC3-203ENST00000465229 CCT7Q99832 543 aa16.27■□□□□ 0.19
EXOSC3-203ENST00000465229 HAUS8Q9BT25 410 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms