RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 CDC6Q99741 560 aa13.77□□□□□ -0.21
COL6A1-202ENST00000463060 MAP3K3Q99759 626 aa13.77□□□□□ -0.21
COL6A1-202ENST00000463060 AIF1LQ9BQI0 150 aa13.77□□□□□ -0.21
COL6A1-202ENST00000463060 NUDT22Q9BRQ3 303 aa13.77□□□□□ -0.21
COL6A1-202ENST00000463060 RHBGQ9H310 441 aa13.77□□□□□ -0.21
COL6A1-202ENST00000463060 LRRN3Q9H3W5 708 aa13.77□□□□□ -0.21
COL6A1-202ENST00000463060 SYNPO2LQ9H987 977 aa13.77□□□□□ -0.21
COL6A1-202ENST00000463060 PSD3Q9NYI0 1048 aa13.77□□□□□ -0.21
COL6A1-202ENST00000463060 TMEM9Q9P0T7 183 aa13.77□□□□□ -0.21
COL6A1-202ENST00000463060 VTI1BQ9UEU0 232 aa13.77□□□□□ -0.21
COL6A1-202ENST00000463060 PCDHGA11Q9Y5H2 935 aa13.77□□□□□ -0.21
COL6A1-202ENST00000463060 PCNX2A6NKB5 2137 aa13.76□□□□□ -0.21
COL6A1-202ENST00000463060 TRBC2A0A5B9 178 aa13.76□□□□□ -0.21
COL6A1-202ENST00000463060 TLCD2A6NGC4 264 aa13.76□□□□□ -0.21
COL6A1-202ENST00000463060 SLC9B1P1A6NJY1 282 aa13.76□□□□□ -0.21
COL6A1-202ENST00000463060 FFAR3O14843 346 aa13.76□□□□□ -0.21
COL6A1-202ENST00000463060 TM4SF5O14894 197 aa13.76□□□□□ -0.21
COL6A1-202ENST00000463060 GIPC1O14908 333 aa13.76□□□□□ -0.21
COL6A1-202ENST00000463060 HAT1O14929 419 aa13.76□□□□□ -0.21
COL6A1-202ENST00000463060 HDAC3O15379 428 aa13.76□□□□□ -0.21
COL6A1-202ENST00000463060 GPR42O15529 346 aa13.76□□□□□ -0.21
COL6A1-202ENST00000463060 PRAMEF10O60809 474 aa13.76□□□□□ -0.21
COL6A1-202ENST00000463060 CTSVO60911 334 aa13.76□□□□□ -0.21
COL6A1-202ENST00000463060 TBX6O95947 436 aaPredicted RBP13.76□□□□□ -0.21
COL6A1-202ENST00000463060 CXCR2P25025 360 aa13.76□□□□□ -0.21
COL6A1-202ENST00000463060 SCTRP47872 440 aa13.76□□□□□ -0.21
COL6A1-202ENST00000463060 INHBCP55103 352 aa13.76□□□□□ -0.21
COL6A1-202ENST00000463060 BTKQ06187 659 aa13.76□□□□□ -0.21
COL6A1-202ENST00000463060 NAA25Q14CX7 972 aa13.76□□□□□ -0.21
COL6A1-202ENST00000463060 ABRAXAS2Q15018 415 aa13.76□□□□□ -0.21
COL6A1-202ENST00000463060 PAGE2BQ5JRK9 111 aa13.76□□□□□ -0.21
COL6A1-202ENST00000463060 FRG2Q64ET8 278 aa13.76□□□□□ -0.21
COL6A1-202ENST00000463060 IRGCQ6NXR0 463 aa13.76□□□□□ -0.21
COL6A1-202ENST00000463060 MED27Q6P2C8 311 aa13.76□□□□□ -0.21
COL6A1-202ENST00000463060 TMEM71Q6P5X7 295 aa13.76□□□□□ -0.21
COL6A1-202ENST00000463060 TMIGD1Q6UXZ0 262 aa13.76□□□□□ -0.21
COL6A1-202ENST00000463060 TRIM46Q7Z4K8 759 aa13.76□□□□□ -0.21
COL6A1-202ENST00000463060 GLRX5Q86SX6 157 aa13.76□□□□□ -0.21
COL6A1-202ENST00000463060 ANKRD53Q8N9V6 530 aa13.76□□□□□ -0.21
COL6A1-202ENST00000463060 RFWD2Q8NHY2 731 aa13.76□□□□□ -0.21
COL6A1-202ENST00000463060 AGR3Q8TD06 166 aa13.76□□□□□ -0.21
COL6A1-202ENST00000463060 STON2Q8WXE9 905 aa13.76□□□□□ -0.21
COL6A1-202ENST00000463060 KLHL6Q8WZ60 621 aa13.76□□□□□ -0.21
COL6A1-202ENST00000463060 TGM7Q96PF1 710 aa13.76□□□□□ -0.21
COL6A1-202ENST00000463060 FRG2BQ96QU4 278 aa13.76□□□□□ -0.21
COL6A1-202ENST00000463060 CCT8L2Q96SF2 557 aa13.76□□□□□ -0.21
COL6A1-202ENST00000463060 DPYSL5Q9BPU6 564 aa13.76□□□□□ -0.21
COL6A1-202ENST00000463060 FARSBQ9NSD9 589 aaKnown RBP13.76□□□□□ -0.21
COL6A1-202ENST00000463060 MARCOQ9UEW3 520 aaPredicted RBP13.76□□□□□ -0.21
COL6A1-202ENST00000463060 PPT2Q9UMR5 302 aa13.76□□□□□ -0.21
COL6A1-202ENST00000463060 SNX6Q9UNH7 406 aa13.76□□□□□ -0.21
COL6A1-202ENST00000463060 CCL27Q9Y4X3 112 aa13.76□□□□□ -0.21
COL6A1-202ENST00000463060 USH1CQ9Y6N9 552 aa13.76□□□□□ -0.21
COL6A1-202ENST00000463060 IGHV5-51A0A0C4DH38 117 aa13.75□□□□□ -0.21
COL6A1-202ENST00000463060 NPIPB8E9PQR5 432 aa13.75□□□□□ -0.21
COL6A1-202ENST00000463060 FOXE1O00358 373 aaPredicted RBP13.75□□□□□ -0.21
COL6A1-202ENST00000463060 HGSO14964 777 aaPredicted RBP13.75□□□□□ -0.21
COL6A1-202ENST00000463060 TOX3O15405 576 aaPredicted RBP13.75□□□□□ -0.21
COL6A1-202ENST00000463060 ULK1O75385 1050 aa13.75□□□□□ -0.21
COL6A1-202ENST00000463060 CPNE6O95741 557 aa13.75□□□□□ -0.21
COL6A1-202ENST00000463060 PDYNP01213 254 aa13.75□□□□□ -0.21
COL6A1-202ENST00000463060 KRT6AP02538 564 aa13.75□□□□□ -0.21
COL6A1-202ENST00000463060 KRT6BP04259 564 aa13.75□□□□□ -0.21
COL6A1-202ENST00000463060 RPLP0P05388 317 aaKnown RBP13.75□□□□□ -0.21
COL6A1-202ENST00000463060 KITP10721 976 aa13.75□□□□□ -0.21
COL6A1-202ENST00000463060 EZRP15311 586 aaKnown RBP13.75□□□□□ -0.21
COL6A1-202ENST00000463060 HMOX2P30519 316 aa13.75□□□□□ -0.21
COL6A1-202ENST00000463060 GABRA4P48169 554 aa13.75□□□□□ -0.21
COL6A1-202ENST00000463060 KRT6CP48668 564 aa13.75□□□□□ -0.21
COL6A1-202ENST00000463060 NEK2P51955 445 aa13.75□□□□□ -0.21
COL6A1-202ENST00000463060 XKR7Q5GH72 579 aa13.75□□□□□ -0.21
COL6A1-202ENST00000463060 C10orf62Q5T681 223 aaPredicted RBP13.75□□□□□ -0.21
COL6A1-202ENST00000463060 ADNP2Q6IQ32 1131 aa13.75□□□□□ -0.21
COL6A1-202ENST00000463060 EPGNQ6UW88 154 aa13.75□□□□□ -0.21
COL6A1-202ENST00000463060 Q6ZSR9 355 aa13.75□□□□□ -0.21
COL6A1-202ENST00000463060 FAM92BQ6ZTR7 304 aa13.75□□□□□ -0.21
COL6A1-202ENST00000463060 PRSS42Q7Z5A4 293 aa13.75□□□□□ -0.21
COL6A1-202ENST00000463060 ARHGAP22Q7Z5H3 698 aa13.75□□□□□ -0.21
COL6A1-202ENST00000463060 PLD3Q8IV08 490 aa13.75□□□□□ -0.21
COL6A1-202ENST00000463060 KRT78Q8N1N4 520 aa13.75□□□□□ -0.21
COL6A1-202ENST00000463060 DNAJC22Q8N4W6 341 aa13.75□□□□□ -0.21
COL6A1-202ENST00000463060 OR4D9Q8NGE8 314 aa13.75□□□□□ -0.21
COL6A1-202ENST00000463060 TWIST2Q8WVJ9 160 aa13.75□□□□□ -0.21
COL6A1-202ENST00000463060 TM4SF19Q96DZ7 209 aa13.75□□□□□ -0.21
COL6A1-202ENST00000463060 MAELQ96JY0 434 aaKnown RBP13.75□□□□□ -0.21
COL6A1-202ENST00000463060 C3orf30Q96M34 536 aa13.75□□□□□ -0.21
COL6A1-202ENST00000463060 OR2A5Q96R48 311 aa13.75□□□□□ -0.21
COL6A1-202ENST00000463060 CCT7Q99832 543 aa13.75□□□□□ -0.21
COL6A1-202ENST00000463060 MEAF6Q9HAF1 191 aa13.75□□□□□ -0.21
COL6A1-202ENST00000463060 FAM60AQ9NP50 221 aa13.75□□□□□ -0.21
COL6A1-202ENST00000463060 TOR4AQ9NXH8 423 aa13.75□□□□□ -0.21
COL6A1-202ENST00000463060 ATXN7L1Q9ULK2 861 aaPredicted RBP13.75□□□□□ -0.21
COL6A1-202ENST00000463060 AP1M2Q9Y6Q5 423 aa13.75□□□□□ -0.21
COL6A1-202ENST00000463060 COL27A1Q8IZC6 1860 aaPredicted RBP13.75□□□□□ -0.21
COL6A1-202ENST00000463060 FEZF1A0PJY2 475 aa13.74□□□□□ -0.21
COL6A1-202ENST00000463060 SDHDO14521 159 aa13.74□□□□□ -0.21
COL6A1-202ENST00000463060 PIP5K1BO14986 540 aa13.74□□□□□ -0.21
COL6A1-202ENST00000463060 HCRTR1O43613 425 aa13.74□□□□□ -0.21
COL6A1-202ENST00000463060 SNX3O60493 162 aa13.74□□□□□ -0.21
COL6A1-202ENST00000463060 FAM107AO95990 144 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms