RNA–Protein interactions for RNA: ENST00000461047.2

NUP98-208, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-208ENST00000461047 VRK3Q8IV63 474 aa5.74□□□□□ -1.49
NUP98-208ENST00000461047 FBXO39Q8N4B4 442 aa5.74□□□□□ -1.49
NUP98-208ENST00000461047 SPATA6LQ8N4H0 392 aa5.74□□□□□ -1.49
NUP98-208ENST00000461047 LILRA3Q8N6C8 439 aaPredicted RBP5.74□□□□□ -1.49
NUP98-208ENST00000461047 ARFGAP2Q8N6H7 521 aa5.74□□□□□ -1.49
NUP98-208ENST00000461047 OR52E1Q8NGJ3 308 aa5.74□□□□□ -1.49
NUP98-208ENST00000461047 OR2L8Q8NGY9 312 aa5.74□□□□□ -1.49
NUP98-208ENST00000461047 PPP1R14CQ8TAE6 165 aa5.74□□□□□ -1.49
NUP98-208ENST00000461047 HMGCLL1Q8TB92 370 aa5.74□□□□□ -1.49
NUP98-208ENST00000461047 ANKRD49Q8WVL7 239 aa5.74□□□□□ -1.49
NUP98-208ENST00000461047 NCSTNQ92542 709 aa5.74□□□□□ -1.49
NUP98-208ENST00000461047 FBXL8Q96CD0 374 aa5.74□□□□□ -1.49
NUP98-208ENST00000461047 APOPT1Q96IL0 206 aa5.74□□□□□ -1.49
NUP98-208ENST00000461047 ATP6V1G3Q96LB4 118 aa5.74□□□□□ -1.49
NUP98-208ENST00000461047 MAGEB10Q96LZ2 347 aaPredicted RBP5.74□□□□□ -1.49
NUP98-208ENST00000461047 GFM1Q96RP9 751 aaKnown RBP5.74□□□□□ -1.49
NUP98-208ENST00000461047 PKP4Q99569 1192 aa5.74□□□□□ -1.49
NUP98-208ENST00000461047 CCDC3Q9BQI4 270 aa5.74□□□□□ -1.49
NUP98-208ENST00000461047 STRADBQ9C0K7 418 aa5.74□□□□□ -1.49
NUP98-208ENST00000461047 RAB33BQ9H082 229 aa5.74□□□□□ -1.49
NUP98-208ENST00000461047 LRRN3Q9H3W5 708 aa5.74□□□□□ -1.49
NUP98-208ENST00000461047 TMBIM4Q9HC24 238 aa5.74□□□□□ -1.49
NUP98-208ENST00000461047 MED4Q9NPJ6 270 aa5.74□□□□□ -1.49
NUP98-208ENST00000461047 CCDC177Q9NQR7 707 aaPredicted RBP5.74□□□□□ -1.49
NUP98-208ENST00000461047 WWOXQ9NZC7 414 aa5.74□□□□□ -1.49
NUP98-208ENST00000461047 CPSF2Q9P2I0 782 aaKnown RBP5.74□□□□□ -1.49
NUP98-208ENST00000461047 SNX7Q9UNH6 387 aa5.74□□□□□ -1.49
NUP98-208ENST00000461047 PDE10AQ9Y233 779 aa5.74□□□□□ -1.49
NUP98-208ENST00000461047 STK38LQ9Y2H1 464 aa5.74□□□□□ -1.49
NUP98-208ENST00000461047 PLLPQ9Y342 182 aa5.74□□□□□ -1.49
NUP98-208ENST00000461047 PCYT1BQ9Y5K3 369 aaPredicted RBP5.74□□□□□ -1.49
NUP98-208ENST00000461047 KCNE2Q9Y6J6 123 aa5.74□□□□□ -1.49
NUP98-208ENST00000461047 RNF215Q9Y6U7 377 aa5.74□□□□□ -1.49
NUP98-208ENST00000461047 C5orf42Q9H799 3197 aa5.74□□□□□ -1.49
NUP98-208ENST00000461047 ZNF318Q5VUA4 2279 aa5.73□□□□□ -1.49
NUP98-208ENST00000461047 PLXNA2O75051 1894 aa5.73□□□□□ -1.49
NUP98-208ENST00000461047 PRUNE2Q8WUY3 3088 aa5.73□□□□□ -1.49
NUP98-208ENST00000461047 IGHV1OR21-1A0A087WYE8 117 aa5.73□□□□□ -1.49
NUP98-208ENST00000461047 OR5K3A6NET4 321 aa5.73□□□□□ -1.49
NUP98-208ENST00000461047 NCF1BA6NI72 391 aaPredicted RBP5.73□□□□□ -1.49
NUP98-208ENST00000461047 NCF1CA8MVU1 366 aaPredicted RBP5.73□□□□□ -1.49
NUP98-208ENST00000461047 ARHGEF33A8MVX0 844 aa5.73□□□□□ -1.49
NUP98-208ENST00000461047 H3BQF6 201 aa5.73□□□□□ -1.49
NUP98-208ENST00000461047 CDC7O00311 574 aa5.73□□□□□ -1.49
NUP98-208ENST00000461047 MAP2K7O14733 419 aa5.73□□□□□ -1.49
NUP98-208ENST00000461047 CLGNO14967 610 aa5.73□□□□□ -1.49
NUP98-208ENST00000461047 RASSF9O75901 435 aa5.73□□□□□ -1.49
NUP98-208ENST00000461047 UBOX5O94941 541 aa5.73□□□□□ -1.49
NUP98-208ENST00000461047 SNUPNO95149 360 aaKnown RBP5.73□□□□□ -1.49
NUP98-208ENST00000461047 EML2O95834 649 aa5.73□□□□□ -1.49
NUP98-208ENST00000461047 TSPAN12O95859 305 aa5.73□□□□□ -1.49
NUP98-208ENST00000461047 RPLP0P05388 317 aaKnown RBP5.73□□□□□ -1.49
NUP98-208ENST00000461047 CHRM5P08912 532 aaPredicted RBP5.73□□□□□ -1.49
NUP98-208ENST00000461047 GIMD1P0DJR0 217 aa5.73□□□□□ -1.49
NUP98-208ENST00000461047 NCF1P14598 390 aaPredicted RBP5.73□□□□□ -1.49
NUP98-208ENST00000461047 CPA3P15088 417 aa5.73□□□□□ -1.49
NUP98-208ENST00000461047 TYRP1P17643 537 aa5.73□□□□□ -1.49
NUP98-208ENST00000461047 POLR2CP19387 275 aaPredicted RBP5.73□□□□□ -1.49
NUP98-208ENST00000461047 CDH3P22223 829 aa5.73□□□□□ -1.49
NUP98-208ENST00000461047 ATP5F1P24539 256 aaPredicted RBP5.73□□□□□ -1.49
NUP98-208ENST00000461047 HPDP32754 393 aaPredicted RBP5.73□□□□□ -1.49
NUP98-208ENST00000461047 PLA2G5P39877 138 aa5.73□□□□□ -1.49
NUP98-208ENST00000461047 BDKRB1P46663 353 aa5.73□□□□□ -1.49
NUP98-208ENST00000461047 NOVA1P51513 510 aaKnown RBP5.73□□□□□ -1.49
NUP98-208ENST00000461047 SLC18A1P54219 525 aa5.73□□□□□ -1.49
NUP98-208ENST00000461047 OR1D5P58170 312 aa5.73□□□□□ -1.49
NUP98-208ENST00000461047 MAGOHP61326 146 aaKnown RBP5.73□□□□□ -1.49
NUP98-208ENST00000461047 SIM1P81133 766 aaPredicted RBP5.73□□□□□ -1.49
NUP98-208ENST00000461047 IRF9Q00978 393 aa5.73□□□□□ -1.49
NUP98-208ENST00000461047 NAE1Q13564 534 aa5.73□□□□□ -1.49
NUP98-208ENST00000461047 LAPTM5Q13571 262 aa5.73□□□□□ -1.49
NUP98-208ENST00000461047 TRA2AQ13595 282 aaKnown RBP eCLIP5.73□□□□□ -1.49
NUP98-208ENST00000461047 NR1D2Q14995 579 aa5.73□□□□□ -1.49
NUP98-208ENST00000461047 CYP2A13Q16696 494 aa5.73□□□□□ -1.49
NUP98-208ENST00000461047 HIST2H2ACQ16777 129 aaPredicted RBP5.73□□□□□ -1.49
NUP98-208ENST00000461047 PFKFB4Q16877 469 aa5.73□□□□□ -1.49
NUP98-208ENST00000461047 SLC5A12Q1EHB4 618 aa5.73□□□□□ -1.49
NUP98-208ENST00000461047 PAGE2BQ5JRK9 111 aa5.73□□□□□ -1.49
NUP98-208ENST00000461047 N4BP2L1Q5TBK1 243 aaPredicted RBP5.73□□□□□ -1.49
NUP98-208ENST00000461047 HIST2H2AA3Q6FI13 130 aa5.73□□□□□ -1.49
NUP98-208ENST00000461047 IRGCQ6NXR0 463 aa5.73□□□□□ -1.49
NUP98-208ENST00000461047 DUS1LQ6P1R4 473 aaKnown RBP5.73□□□□□ -1.49
NUP98-208ENST00000461047 GUSBP11Q6P575 273 aa5.73□□□□□ -1.49
NUP98-208ENST00000461047 TMEM71Q6P5X7 295 aa5.73□□□□□ -1.49
NUP98-208ENST00000461047 TMEM207Q6UWW9 146 aa5.73□□□□□ -1.49
NUP98-208ENST00000461047 RBM44Q6ZP01 1051 aaKnown RBP5.73□□□□□ -1.49
NUP98-208ENST00000461047 USP53Q70EK8 1073 aa5.73□□□□□ -1.49
NUP98-208ENST00000461047 NLRC3Q7RTR2 1065 aa5.73□□□□□ -1.49
NUP98-208ENST00000461047 LRRC70Q7Z2Q7 622 aa5.73□□□□□ -1.49
NUP98-208ENST00000461047 SPRED1Q7Z699 444 aa5.73□□□□□ -1.49
NUP98-208ENST00000461047 PIP4P1Q86T03 277 aa5.73□□□□□ -1.49
NUP98-208ENST00000461047 CLEC14AQ86T13 490 aa5.73□□□□□ -1.49
NUP98-208ENST00000461047 ZNF605Q86T29 641 aa5.73□□□□□ -1.49
NUP98-208ENST00000461047 C17orf64Q86WR6 236 aa5.73□□□□□ -1.49
NUP98-208ENST00000461047 KMT5CQ86Y97 462 aa5.73□□□□□ -1.49
NUP98-208ENST00000461047 KIRREL3Q8IZU9 778 aa5.73□□□□□ -1.49
NUP98-208ENST00000461047 CENPLQ8N0S6 344 aaPredicted RBP5.73□□□□□ -1.49
NUP98-208ENST00000461047 C4orf33Q8N1A6 199 aa5.73□□□□□ -1.49
NUP98-208ENST00000461047 GALNT15Q8N3T1 639 aa5.73□□□□□ -1.49
NUP98-208ENST00000461047 ZNF655Q8N720 491 aaPredicted RBP5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms