RNA–Protein interactions for RNA: ENST00000460333.5

VPS13D-202, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 4,910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-202ENST00000460333 TMEM168Q9H0V1 697 aa6.02□□□□□ -1.45
VPS13D-202ENST00000460333 PTTG3PQ9NZH4 202 aa6.02□□□□□ -1.45
VPS13D-202ENST00000460333 IL37Q9NZH6 218 aa6.02□□□□□ -1.45
VPS13D-202ENST00000460333 ZDHHC2Q9UIJ5 367 aa6.02□□□□□ -1.45
VPS13D-202ENST00000460333 PCDHGB3Q9Y5G1 929 aa6.02□□□□□ -1.45
VPS13D-202ENST00000460333 PRSS51A0A1B0GVH4 220 aa6.02□□□□□ -1.45
VPS13D-202ENST00000460333 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.02□□□□□ -1.45
VPS13D-202ENST00000460333 A0A1W2PQ67 120 aa6.02□□□□□ -1.45
VPS13D-202ENST00000460333 SOCS2O14508 198 aa6.02□□□□□ -1.45
VPS13D-202ENST00000460333 BCAS1O75363 584 aaPredicted RBP6.02□□□□□ -1.45
VPS13D-202ENST00000460333 RPP40O75818 363 aaKnown RBP6.02□□□□□ -1.45
VPS13D-202ENST00000460333 FGF18O76093 207 aa6.02□□□□□ -1.45
VPS13D-202ENST00000460333 C8AP07357 584 aa6.02□□□□□ -1.45
VPS13D-202ENST00000460333 PRG2P13727 222 aa6.02□□□□□ -1.45
VPS13D-202ENST00000460333 NMBRP28336 390 aa6.02□□□□□ -1.45
VPS13D-202ENST00000460333 SERPINA4P29622 427 aa6.02□□□□□ -1.45
VPS13D-202ENST00000460333 WEE1P30291 646 aa6.02□□□□□ -1.45
VPS13D-202ENST00000460333 MAGEA3P43357 314 aa6.02□□□□□ -1.45
VPS13D-202ENST00000460333 KCNQ1P51787 676 aa6.02□□□□□ -1.45
VPS13D-202ENST00000460333 AP1S1P61966 158 aa6.02□□□□□ -1.45
VPS13D-202ENST00000460333 ABRQ12979 859 aa6.02□□□□□ -1.45
VPS13D-202ENST00000460333 EFR3AQ14156 821 aa6.02□□□□□ -1.45
VPS13D-202ENST00000460333 DPY19L1Q2PZI1 675 aa6.02□□□□□ -1.45
VPS13D-202ENST00000460333 HAGHLQ6PII5 290 aaPredicted RBP6.02□□□□□ -1.45
VPS13D-202ENST00000460333 CD300LGQ6UXG3 332 aa6.02□□□□□ -1.45
VPS13D-202ENST00000460333 MACC1Q6ZN28 852 aa6.02□□□□□ -1.45
VPS13D-202ENST00000460333 RTL10Q7L3V2 364 aa6.02□□□□□ -1.45
VPS13D-202ENST00000460333 LACC1Q8IV20 430 aa6.02□□□□□ -1.45
VPS13D-202ENST00000460333 GJD3Q8N144 294 aa6.02□□□□□ -1.45
VPS13D-202ENST00000460333 OR4A15Q8NGL6 344 aa6.02□□□□□ -1.45
VPS13D-202ENST00000460333 MOSPD2Q8NHP6 518 aa6.02□□□□□ -1.45
VPS13D-202ENST00000460333 IMP4Q96G21 291 aaKnown RBP6.02□□□□□ -1.45
VPS13D-202ENST00000460333 RANBP9Q96S59 729 aa6.02□□□□□ -1.45
VPS13D-202ENST00000460333 ZNF607Q96SK3 696 aa6.02□□□□□ -1.45
VPS13D-202ENST00000460333 CTRCQ99895 268 aa6.02□□□□□ -1.45
VPS13D-202ENST00000460333 TCF25Q9BQ70 676 aa6.02□□□□□ -1.45
VPS13D-202ENST00000460333 LHPPQ9H008 270 aa6.02□□□□□ -1.45
VPS13D-202ENST00000460333 XKR8Q9H6D3 395 aa6.02□□□□□ -1.45
VPS13D-202ENST00000460333 ZNF395Q9H8N7 513 aaPredicted RBP6.02□□□□□ -1.45
VPS13D-202ENST00000460333 KCNK13Q9HB14 408 aa6.02□□□□□ -1.45
VPS13D-202ENST00000460333 MCUBQ9NWR8 336 aa6.02□□□□□ -1.45
VPS13D-202ENST00000460333 C1orf109Q9NX04 203 aa6.02□□□□□ -1.45
VPS13D-202ENST00000460333 CFAP97Q9P2B7 532 aa6.02□□□□□ -1.45
VPS13D-202ENST00000460333 A0A0X1KG70 313 aa6.02□□□□□ -1.45
VPS13D-202ENST00000460333 COCHO43405 550 aa6.02□□□□□ -1.45
VPS13D-202ENST00000460333 CSF2RAP15509 400 aa6.02□□□□□ -1.45
VPS13D-202ENST00000460333 PTPN2P17706 415 aa6.02□□□□□ -1.45
VPS13D-202ENST00000460333 ETV4P43268 484 aa6.02□□□□□ -1.45
VPS13D-202ENST00000460333 KIR3DL1P43629 444 aa6.02□□□□□ -1.45
VPS13D-202ENST00000460333 ASMTP46597 345 aa6.02□□□□□ -1.45
VPS13D-202ENST00000460333 PFKPQ01813 784 aa6.02□□□□□ -1.45
VPS13D-202ENST00000460333 SLC10A7Q0GE19 358 aa6.02□□□□□ -1.45
VPS13D-202ENST00000460333 GRIK2Q13002 908 aa6.02□□□□□ -1.45
VPS13D-202ENST00000460333 CLCA4Q14CN2 919 aa6.02□□□□□ -1.45
VPS13D-202ENST00000460333 IRAK1BP1Q5VVH5 260 aa6.02□□□□□ -1.45
VPS13D-202ENST00000460333 TICAM1Q8IUC6 712 aa6.02□□□□□ -1.45
VPS13D-202ENST00000460333 OR52K2Q8NGK3 314 aa6.02□□□□□ -1.45
VPS13D-202ENST00000460333 OR6Q1Q8NGQ2 317 aa6.02□□□□□ -1.45
VPS13D-202ENST00000460333 OR10A6Q8NH74 314 aa6.02□□□□□ -1.45
VPS13D-202ENST00000460333 SNIP1Q8TAD8 396 aaKnown RBP6.02□□□□□ -1.45
VPS13D-202ENST00000460333 ACDQ96AP0 544 aa6.02□□□□□ -1.45
VPS13D-202ENST00000460333 TCEAL4Q96EI5 215 aa6.02□□□□□ -1.45
VPS13D-202ENST00000460333 PRR11Q96HE9 360 aaPredicted RBP6.02□□□□□ -1.45
VPS13D-202ENST00000460333 MYRFLQ96LU7 910 aa6.02□□□□□ -1.45
VPS13D-202ENST00000460333 C12orf66Q96MD2 445 aa6.02□□□□□ -1.45
VPS13D-202ENST00000460333 POLR2J2Q9GZM3 115 aaKnown RBP6.02□□□□□ -1.45
VPS13D-202ENST00000460333 TFB2MQ9H5Q4 396 aaKnown RBP6.02□□□□□ -1.45
VPS13D-202ENST00000460333 ATP13A3Q9H7F0 1226 aa6.02□□□□□ -1.45
VPS13D-202ENST00000460333 CUEDC1Q9NWM3 386 aaPredicted RBP6.02□□□□□ -1.45
VPS13D-202ENST00000460333 HCN4Q9Y3Q4 1203 aa6.02□□□□□ -1.45
VPS13D-202ENST00000460333 KANTRA0A1W2PQU2 76 aa6.02□□□□□ -1.45
VPS13D-202ENST00000460333 TP73O15350 636 aa6.02□□□□□ -1.45
VPS13D-202ENST00000460333 PRMT3O60678 531 aa6.02□□□□□ -1.45
VPS13D-202ENST00000460333 HCN1O60741 890 aa6.02□□□□□ -1.45
VPS13D-202ENST00000460333 CNTN5O94779 1100 aa6.02□□□□□ -1.45
VPS13D-202ENST00000460333 ALX3O95076 343 aa6.02□□□□□ -1.45
VPS13D-202ENST00000460333 SNAP29O95721 258 aa6.02□□□□□ -1.45
VPS13D-202ENST00000460333 IGFBP6P24592 240 aaPredicted RBP6.02□□□□□ -1.45
VPS13D-202ENST00000460333 EIF2DP41214 584 aaKnown RBP6.02□□□□□ -1.45
VPS13D-202ENST00000460333 NR4A2P43354 598 aa6.02□□□□□ -1.45
VPS13D-202ENST00000460333 ETV1P50549 477 aa6.02□□□□□ -1.45
VPS13D-202ENST00000460333 POLR2LP62875 67 aaKnown RBP6.02□□□□□ -1.45
VPS13D-202ENST00000460333 CYP4F8P98187 520 aa6.02□□□□□ -1.45
VPS13D-202ENST00000460333 CRTC2Q53ET0 693 aaPredicted RBP6.02□□□□□ -1.45
VPS13D-202ENST00000460333 IFI44LQ53G44 452 aa6.02□□□□□ -1.45
VPS13D-202ENST00000460333 AKIRIN2Q53H80 203 aa6.02□□□□□ -1.45
VPS13D-202ENST00000460333 PAMR1Q6UXH9 720 aa6.02□□□□□ -1.45
VPS13D-202ENST00000460333 DET1Q7L5Y6 550 aa6.02□□□□□ -1.45
VPS13D-202ENST00000460333 ARHGAP12Q8IWW6 846 aa6.02□□□□□ -1.45
VPS13D-202ENST00000460333 SPATA6LQ8N4H0 392 aa6.02□□□□□ -1.45
VPS13D-202ENST00000460333 ARL14EPQ8N8R7 260 aaPredicted RBP6.02□□□□□ -1.45
VPS13D-202ENST00000460333 GDPD1Q8N9F7 314 aa6.02□□□□□ -1.45
VPS13D-202ENST00000460333 C11orf65Q8NCR3 313 aa6.02□□□□□ -1.45
VPS13D-202ENST00000460333 OR7D4Q8NG98 312 aa6.02□□□□□ -1.45
VPS13D-202ENST00000460333 OR4L1Q8NH43 312 aa6.02□□□□□ -1.45
VPS13D-202ENST00000460333 UBE2E3Q969T4 207 aa6.02□□□□□ -1.45
VPS13D-202ENST00000460333 MAELQ96JY0 434 aaKnown RBP6.02□□□□□ -1.45
VPS13D-202ENST00000460333 GPR22Q99680 433 aa6.02□□□□□ -1.45
VPS13D-202ENST00000460333 FNDC11Q9BVV2 318 aa6.02□□□□□ -1.45
VPS13D-202ENST00000460333 C1QTNF7Q9BXJ2 289 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms