RNA–Protein interactions for RNA: ENST00000452029.1

TMEM87B-202, Transcript of transmembrane protein 87B, humanhuman

TSL 1 (best)

Gene TMEM87B, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM87B-202ENST00000452029 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.6□□□□□ -1.67
TMEM87B-202ENST00000452029 EIF1ADQ8N9N8 165 aaKnown RBP4.6□□□□□ -1.67
TMEM87B-202ENST00000452029 MIGA1Q8NAN2 632 aa4.6□□□□□ -1.67
TMEM87B-202ENST00000452029 TRIM58Q8NG06 486 aa4.6□□□□□ -1.67
TMEM87B-202ENST00000452029 OR4K1Q8NGD4 311 aa4.6□□□□□ -1.67
TMEM87B-202ENST00000452029 OR13C2Q8NGS9 318 aa4.6□□□□□ -1.67
TMEM87B-202ENST00000452029 SLC38A5Q8WUX1 472 aa4.6□□□□□ -1.67
TMEM87B-202ENST00000452029 RFT1Q96AA3 541 aa4.6□□□□□ -1.67
TMEM87B-202ENST00000452029 PGM2Q96G03 612 aa4.6□□□□□ -1.67
TMEM87B-202ENST00000452029 FAM20AQ96MK3 541 aa4.6□□□□□ -1.67
TMEM87B-202ENST00000452029 TCEANC2Q96MN5 208 aa4.6□□□□□ -1.67
TMEM87B-202ENST00000452029 PSKH2Q96QS6 385 aa4.6□□□□□ -1.67
TMEM87B-202ENST00000452029 NDNQ99608 321 aa4.6□□□□□ -1.67
TMEM87B-202ENST00000452029 TBCDQ9BTW9 1192 aa4.6□□□□□ -1.67
TMEM87B-202ENST00000452029 MMTAG2Q9BU76 263 aaKnown RBP4.6□□□□□ -1.67
TMEM87B-202ENST00000452029 FICDQ9BVA6 458 aa4.6□□□□□ -1.67
TMEM87B-202ENST00000452029 KRTAP3-1Q9BYR8 98 aa4.6□□□□□ -1.67
TMEM87B-202ENST00000452029 NCOR1P1Q9H4R4 102 aa4.6□□□□□ -1.67
TMEM87B-202ENST00000452029 PCDH9Q9HC56 1237 aa4.6□□□□□ -1.67
TMEM87B-202ENST00000452029 VAT1LQ9HCJ6 419 aa4.6□□□□□ -1.67
TMEM87B-202ENST00000452029 PDGFCQ9NRA1 345 aa4.6□□□□□ -1.67
TMEM87B-202ENST00000452029 C1RLQ9NZP8 487 aa4.6□□□□□ -1.67
TMEM87B-202ENST00000452029 PSORS1C1Q9UIG5 152 aa4.6□□□□□ -1.67
TMEM87B-202ENST00000452029 TNNQ9UQP3 1299 aa4.6□□□□□ -1.67
TMEM87B-202ENST00000452029 TMED5Q9Y3A6 229 aa4.6□□□□□ -1.67
TMEM87B-202ENST00000452029 C2CD2Q9Y426 696 aa4.6□□□□□ -1.67
TMEM87B-202ENST00000452029 DISP3Q9P2K9 1392 aa4.6□□□□□ -1.67
TMEM87B-202ENST00000452029 ZMYM2Q9UBW7 1377 aa4.6□□□□□ -1.67
TMEM87B-202ENST00000452029 KIAA1217Q5T5P2 1943 aa4.6□□□□□ -1.67
TMEM87B-202ENST00000452029 MED19A0JLT2 244 aaPredicted RBP4.59□□□□□ -1.67
TMEM87B-202ENST00000452029 C17orf105B2RV13 164 aa4.59□□□□□ -1.67
TMEM87B-202ENST00000452029 SLC22A2O15244 555 aa4.59□□□□□ -1.67
TMEM87B-202ENST00000452029 NME2P1O60361 137 aa4.59□□□□□ -1.67
TMEM87B-202ENST00000452029 TBX19O60806 448 aa4.59□□□□□ -1.67
TMEM87B-202ENST00000452029 LDB3O75112 727 aa4.59□□□□□ -1.67
TMEM87B-202ENST00000452029 CNOT3O75175 753 aaKnown RBP4.59□□□□□ -1.67
TMEM87B-202ENST00000452029 CSO75390 466 aaKnown RBP4.59□□□□□ -1.67
TMEM87B-202ENST00000452029 VPS26AO75436 327 aa4.59□□□□□ -1.67
TMEM87B-202ENST00000452029 GAS8O95995 478 aa4.59□□□□□ -1.67
TMEM87B-202ENST00000452029 B4GALT1P15291 398 aa4.59□□□□□ -1.67
TMEM87B-202ENST00000452029 NAGAP17050 411 aa4.59□□□□□ -1.67
TMEM87B-202ENST00000452029 DUTP33316 252 aaKnown RBP4.59□□□□□ -1.67
TMEM87B-202ENST00000452029 OR1D2P34982 312 aa4.59□□□□□ -1.67
TMEM87B-202ENST00000452029 ARHGAP25P42331 645 aa4.59□□□□□ -1.67
TMEM87B-202ENST00000452029 MTIF2P46199 727 aaKnown RBP4.59□□□□□ -1.67
TMEM87B-202ENST00000452029 GLIPR1P48060 266 aa4.59□□□□□ -1.67
TMEM87B-202ENST00000452029 MXI1P50539 228 aa4.59□□□□□ -1.67
TMEM87B-202ENST00000452029 TNFSF10P50591 281 aa4.59□□□□□ -1.67
TMEM87B-202ENST00000452029 PGGT1BP53609 377 aa4.59□□□□□ -1.67
TMEM87B-202ENST00000452029 SSTP61278 116 aa4.59□□□□□ -1.67
TMEM87B-202ENST00000452029 CCZ1BP86790 482 aa4.59□□□□□ -1.67
TMEM87B-202ENST00000452029 CCZ1P86791 482 aaPredicted RBP4.59□□□□□ -1.67
TMEM87B-202ENST00000452029 HSF2Q03933 536 aa4.59□□□□□ -1.67
TMEM87B-202ENST00000452029 COX10Q12887 443 aa4.59□□□□□ -1.67
TMEM87B-202ENST00000452029 TRAF1Q13077 416 aa4.59□□□□□ -1.67
TMEM87B-202ENST00000452029 SLC36A3Q495N2 470 aa4.59□□□□□ -1.67
TMEM87B-202ENST00000452029 CFAP221Q4G0U5 840 aa4.59□□□□□ -1.67
TMEM87B-202ENST00000452029 TMEM119Q4V9L6 283 aa4.59□□□□□ -1.67
TMEM87B-202ENST00000452029 ZC2HC1CQ53FD0 456 aaPredicted RBP4.59□□□□□ -1.67
TMEM87B-202ENST00000452029 ARHGAP17Q68EM7 881 aa4.59□□□□□ -1.67
TMEM87B-202ENST00000452029 FCRLBQ6BAA4 426 aa4.59□□□□□ -1.67
TMEM87B-202ENST00000452029 FAM159AQ6UWV7 190 aa4.59□□□□□ -1.67
TMEM87B-202ENST00000452029 PACS1Q6VY07 963 aa4.59□□□□□ -1.67
TMEM87B-202ENST00000452029 CROCCP3Q8IVE0 287 aa4.59□□□□□ -1.67
TMEM87B-202ENST00000452029 CERS5Q8N5B7 392 aa4.59□□□□□ -1.67
TMEM87B-202ENST00000452029 GBGT1Q8N5D6 347 aa4.59□□□□□ -1.67
TMEM87B-202ENST00000452029 MAGEC3Q8TD91 643 aa4.59□□□□□ -1.67
TMEM87B-202ENST00000452029 CCDC107Q8WV48 283 aa4.59□□□□□ -1.67
TMEM87B-202ENST00000452029 IRGQQ8WZA9 623 aa4.59□□□□□ -1.67
TMEM87B-202ENST00000452029 CDK5RAP1Q96SZ6 601 aaKnown RBP4.59□□□□□ -1.67
TMEM87B-202ENST00000452029 TRMT61BQ9BVS5 477 aaKnown RBP4.59□□□□□ -1.67
TMEM87B-202ENST00000452029 LRRC40Q9H9A6 602 aa4.59□□□□□ -1.67
TMEM87B-202ENST00000452029 HOMER3Q9NSC5 361 aa4.59□□□□□ -1.67
TMEM87B-202ENST00000452029 FARSBQ9NSD9 589 aaKnown RBP4.59□□□□□ -1.67
TMEM87B-202ENST00000452029 TMEM184CQ9NVA4 438 aa4.59□□□□□ -1.67
TMEM87B-202ENST00000452029 RAI14Q9P0K7 980 aa4.59□□□□□ -1.67
TMEM87B-202ENST00000452029 NPC1L1Q9UHC9 1359 aa4.58□□□□□ -1.68
TMEM87B-202ENST00000452029 ABCC4O15439 1325 aa4.58□□□□□ -1.68
TMEM87B-202ENST00000452029 TRAV18A0A075B6X5 111 aa4.58□□□□□ -1.68
TMEM87B-202ENST00000452029 IGHV4-28A0A0C4DH34 117 aa4.58□□□□□ -1.68
TMEM87B-202ENST00000452029 CTAGE15A4D2H0 777 aa4.58□□□□□ -1.68
TMEM87B-202ENST00000452029 C5orf60A6NFR6 353 aa4.58□□□□□ -1.68
TMEM87B-202ENST00000452029 C2orf81A6NN90 581 aa4.58□□□□□ -1.68
TMEM87B-202ENST00000452029 GAPDHSO14556 408 aaPredicted RBP4.58□□□□□ -1.68
TMEM87B-202ENST00000452029 CASQ2O14958 399 aaPredicted RBP4.58□□□□□ -1.68
TMEM87B-202ENST00000452029 MAPK13O15264 365 aa4.58□□□□□ -1.68
TMEM87B-202ENST00000452029 GRID2O43424 1007 aa4.58□□□□□ -1.68
TMEM87B-202ENST00000452029 RNASEH1O60930 286 aaKnown RBP4.58□□□□□ -1.68
TMEM87B-202ENST00000452029 TOM1L1O75674 476 aa4.58□□□□□ -1.68
TMEM87B-202ENST00000452029 SURF6O75683 361 aaKnown RBP4.58□□□□□ -1.68
TMEM87B-202ENST00000452029 FGF2P09038 288 aa4.58□□□□□ -1.68
TMEM87B-202ENST00000452029 CTAGE8P0CG41 777 aa4.58□□□□□ -1.68
TMEM87B-202ENST00000452029 CEACAM1P13688 526 aa4.58□□□□□ -1.68
TMEM87B-202ENST00000452029 ARSBP15848 533 aa4.58□□□□□ -1.68
TMEM87B-202ENST00000452029 GOT1P17174 413 aa4.58□□□□□ -1.68
TMEM87B-202ENST00000452029 S1PR1P21453 382 aa4.58□□□□□ -1.68
TMEM87B-202ENST00000452029 PTPN6P29350 595 aa4.58□□□□□ -1.68
TMEM87B-202ENST00000452029 MARCKSP29966 332 aaPredicted RBP4.58□□□□□ -1.68
TMEM87B-202ENST00000452029 HLA-FP30511 346 aa4.58□□□□□ -1.68
TMEM87B-202ENST00000452029 ADRA1AP35348 466 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms