RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 ANKMY1Q9P2S6 941 aa4.16□□□□□ -1.74
HMGB1P48-201ENST00000446155 UBQLN2Q9UHD9 624 aa4.16□□□□□ -1.74
HMGB1P48-201ENST00000446155 KCNG2Q9UJ96 466 aa4.16□□□□□ -1.74
HMGB1P48-201ENST00000446155 RALYQ9UKM9 306 aaKnown RBP4.16□□□□□ -1.74
HMGB1P48-201ENST00000446155 KIF3AQ9Y496 699 aa4.16□□□□□ -1.74
HMGB1P48-201ENST00000446155 SMCHD1A6NHR9 2005 aa4.16□□□□□ -1.74
HMGB1P48-201ENST00000446155 PRAG1Q86YV5 1406 aa4.15□□□□□ -1.74
HMGB1P48-201ENST00000446155 A0A1W2PPK0 400 aa4.15□□□□□ -1.75
HMGB1P48-201ENST00000446155 CLRN2A0PK11 232 aa4.15□□□□□ -1.75
HMGB1P48-201ENST00000446155 DENND3A2RUS2 1198 aa4.15□□□□□ -1.75
HMGB1P48-201ENST00000446155 OR5K3A6NET4 321 aa4.15□□□□□ -1.75
HMGB1P48-201ENST00000446155 H0YIG0 161 aa4.15□□□□□ -1.75
HMGB1P48-201ENST00000446155 RIPK2O43353 540 aa4.15□□□□□ -1.75
HMGB1P48-201ENST00000446155 SSX5O60225 188 aa4.15□□□□□ -1.75
HMGB1P48-201ENST00000446155 OR6B1O95007 311 aa4.15□□□□□ -1.75
HMGB1P48-201ENST00000446155 SNX4O95219 450 aa4.15□□□□□ -1.75
HMGB1P48-201ENST00000446155 GSRP00390 522 aa4.15□□□□□ -1.75
HMGB1P48-201ENST00000446155 FAM106CPP0CH98 169 aa4.15□□□□□ -1.75
HMGB1P48-201ENST00000446155 HSPA5P11021 654 aaKnown RBP4.15□□□□□ -1.75
HMGB1P48-201ENST00000446155 UGT1A6P19224 532 aa4.15□□□□□ -1.75
HMGB1P48-201ENST00000446155 NR1D1P20393 614 aa4.15□□□□□ -1.75
HMGB1P48-201ENST00000446155 CYP2A7P20853 494 aa4.15□□□□□ -1.75
HMGB1P48-201ENST00000446155 PTGER4P35408 488 aa4.15□□□□□ -1.75
HMGB1P48-201ENST00000446155 ELP6Q0PNE2 266 aa4.15□□□□□ -1.75
HMGB1P48-201ENST00000446155 PNRC1Q12796 327 aaPredicted RBP4.15□□□□□ -1.75
HMGB1P48-201ENST00000446155 TSTA3Q13630 321 aaPredicted RBP4.15□□□□□ -1.75
HMGB1P48-201ENST00000446155 GTF2H2Q13888 395 aa4.15□□□□□ -1.75
HMGB1P48-201ENST00000446155 CEBPEQ15744 281 aa4.15□□□□□ -1.75
HMGB1P48-201ENST00000446155 NPTX1Q15818 432 aa4.15□□□□□ -1.75
HMGB1P48-201ENST00000446155 STXBP2Q15833 593 aa4.15□□□□□ -1.75
HMGB1P48-201ENST00000446155 PTGISQ16647 500 aa4.15□□□□□ -1.75
HMGB1P48-201ENST00000446155 EPC2Q52LR7 807 aa4.15□□□□□ -1.75
HMGB1P48-201ENST00000446155 CEP55Q53EZ4 464 aa4.15□□□□□ -1.75
HMGB1P48-201ENST00000446155 GTF2H2CQ6P1K8 395 aa4.15□□□□□ -1.75
HMGB1P48-201ENST00000446155 WDR88Q6ZMY6 472 aa4.15□□□□□ -1.75
HMGB1P48-201ENST00000446155 DGLUCYQ7Z3D6 616 aa4.15□□□□□ -1.75
HMGB1P48-201ENST00000446155 MAP7D3Q8IWC1 876 aa4.15□□□□□ -1.75
HMGB1P48-201ENST00000446155 FAM114A1Q8IWE2 563 aa4.15□□□□□ -1.75
HMGB1P48-201ENST00000446155 DCP1BQ8IZD4 617 aaKnown RBP4.15□□□□□ -1.75
HMGB1P48-201ENST00000446155 APCDD1Q8J025 514 aa4.15□□□□□ -1.75
HMGB1P48-201ENST00000446155 C1orf52Q8N6N3 182 aaKnown RBP4.15□□□□□ -1.75
HMGB1P48-201ENST00000446155 KCNH5Q8NCM2 988 aa4.15□□□□□ -1.75
HMGB1P48-201ENST00000446155 TMEM185AQ8NFB2 350 aa4.15□□□□□ -1.75
HMGB1P48-201ENST00000446155 PPP4R1Q8TF05 950 aa4.15□□□□□ -1.75
HMGB1P48-201ENST00000446155 SHC3Q92529 594 aa4.15□□□□□ -1.75
HMGB1P48-201ENST00000446155 PROX1Q92786 737 aa4.15□□□□□ -1.75
HMGB1P48-201ENST00000446155 DTNBP1Q96EV8 351 aa4.15□□□□□ -1.75
HMGB1P48-201ENST00000446155 C14orf79Q96F83 325 aa4.15□□□□□ -1.75
HMGB1P48-201ENST00000446155 RAD9AQ99638 391 aa4.15□□□□□ -1.75
HMGB1P48-201ENST00000446155 FAM213AQ9BRX8 229 aa4.15□□□□□ -1.75
HMGB1P48-201ENST00000446155 DDX47Q9H0S4 455 aaKnown RBP4.15□□□□□ -1.75
HMGB1P48-201ENST00000446155 TSPYL1Q9H0U9 437 aa4.15□□□□□ -1.75
HMGB1P48-201ENST00000446155 VPS33BQ9H267 617 aa4.15□□□□□ -1.75
HMGB1P48-201ENST00000446155 COQ10BQ9H8M1 238 aa4.15□□□□□ -1.75
HMGB1P48-201ENST00000446155 MAGEF1Q9HAY2 307 aa4.15□□□□□ -1.75
HMGB1P48-201ENST00000446155 PPANQ9NQ55 473 aaKnown RBP4.15□□□□□ -1.75
HMGB1P48-201ENST00000446155 TMOD2Q9NZR1 351 aa4.15□□□□□ -1.75
HMGB1P48-201ENST00000446155 TXNDC16Q9P2K2 825 aa4.15□□□□□ -1.75
HMGB1P48-201ENST00000446155 DNPEPQ9ULA0 475 aa4.15□□□□□ -1.75
HMGB1P48-201ENST00000446155 HPCAL4Q9UM19 191 aa4.15□□□□□ -1.75
HMGB1P48-201ENST00000446155 NUDCQ9Y266 331 aa4.15□□□□□ -1.75
HMGB1P48-201ENST00000446155 HMGXB3Q12766 1538 aa4.15□□□□□ -1.75
HMGB1P48-201ENST00000446155 A0A1W2PS18 150 aa4.14□□□□□ -1.75
HMGB1P48-201ENST00000446155 ASPDHA6ND91 283 aa4.14□□□□□ -1.75
HMGB1P48-201ENST00000446155 DVL1O14640 695 aa4.14□□□□□ -1.75
HMGB1P48-201ENST00000446155 ANGPT2O15123 496 aa4.14□□□□□ -1.75
HMGB1P48-201ENST00000446155 ZNHIT1O43257 154 aa4.14□□□□□ -1.75
HMGB1P48-201ENST00000446155 PALMO75781 387 aa4.14□□□□□ -1.75
HMGB1P48-201ENST00000446155 AK1P00568 194 aa4.14□□□□□ -1.75
HMGB1P48-201ENST00000446155 OPN1MWP04001 364 aa4.14□□□□□ -1.75
HMGB1P48-201ENST00000446155 OPN1MW2P0DN77 364 aa4.14□□□□□ -1.75
HMGB1P48-201ENST00000446155 OPN1MW3P0DN78 364 aa4.14□□□□□ -1.75
HMGB1P48-201ENST00000446155 SKILP12757 684 aa4.14□□□□□ -1.75
HMGB1P48-201ENST00000446155 GM2AP17900 193 aa4.14□□□□□ -1.75
HMGB1P48-201ENST00000446155 POLR2CP19387 275 aaPredicted RBP4.14□□□□□ -1.75
HMGB1P48-201ENST00000446155 DGKAP23743 735 aa4.14□□□□□ -1.75
HMGB1P48-201ENST00000446155 DNAJB1P25685 340 aa4.14□□□□□ -1.75
HMGB1P48-201ENST00000446155 GNL1P36915 607 aaPredicted RBP4.14□□□□□ -1.75
HMGB1P48-201ENST00000446155 PSMC4P43686 418 aa4.14□□□□□ -1.75
HMGB1P48-201ENST00000446155 ARCN1P48444 511 aaKnown RBP4.14□□□□□ -1.75
HMGB1P48-201ENST00000446155 MMP15P51511 669 aa4.14□□□□□ -1.75
HMGB1P48-201ENST00000446155 DLX5P56178 289 aa4.14□□□□□ -1.75
HMGB1P48-201ENST00000446155 COG7P83436 770 aa4.14□□□□□ -1.75
HMGB1P48-201ENST00000446155 SCGB2A2Q13296 93 aa4.14□□□□□ -1.75
HMGB1P48-201ENST00000446155 MAJINQ3KP22 176 aa4.14□□□□□ -1.75
HMGB1P48-201ENST00000446155 CCNYL2Q5T2Q4 361 aa4.14□□□□□ -1.75
HMGB1P48-201ENST00000446155 RIPPLY2Q5TAB7 128 aa4.14□□□□□ -1.75
HMGB1P48-201ENST00000446155 FAM46CQ5VWP2 391 aa4.14□□□□□ -1.75
HMGB1P48-201ENST00000446155 RAET1GQ6H3X3 334 aa4.14□□□□□ -1.75
HMGB1P48-201ENST00000446155 AFTPHQ6ULP2 937 aa4.14□□□□□ -1.75
HMGB1P48-201ENST00000446155 RAD9BQ6WBX8 426 aa4.14□□□□□ -1.75
HMGB1P48-201ENST00000446155 MACC1Q6ZN28 852 aa4.14□□□□□ -1.75
HMGB1P48-201ENST00000446155 FOXL2NBQ6ZUU3 175 aa4.14□□□□□ -1.75
HMGB1P48-201ENST00000446155 ARHGAP22Q7Z5H3 698 aa4.14□□□□□ -1.75
HMGB1P48-201ENST00000446155 TAF8Q7Z7C8 310 aa4.14□□□□□ -1.75
HMGB1P48-201ENST00000446155 SMIM29Q86T20 159 aa4.14□□□□□ -1.75
HMGB1P48-201ENST00000446155 ANKRD46Q86W74 232 aa4.14□□□□□ -1.75
HMGB1P48-201ENST00000446155 MEX3DQ86XN8 651 aaKnown RBP4.14□□□□□ -1.75
HMGB1P48-201ENST00000446155 MUC20Q8N307 709 aaPredicted RBP4.14□□□□□ -1.75
HMGB1P48-201ENST00000446155 RYBPQ8N488 228 aaPredicted RBP4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms