RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 SLC22A17Q8WUG5 538 aa16.14■□□□□ 0.17
TCOF1-206ENST00000445265 TRIB2Q92519 343 aa16.14■□□□□ 0.17
TCOF1-206ENST00000445265 TMEM165Q9HC07 324 aa16.14■□□□□ 0.17
TCOF1-206ENST00000445265 IL17CQ9P0M4 197 aa16.14■□□□□ 0.17
TCOF1-206ENST00000445265 UPK3BL1B0FP48 263 aa16.14■□□□□ 0.17
TCOF1-206ENST00000445265 UPK3BL2E5RIL1 263 aa16.14■□□□□ 0.17
TCOF1-206ENST00000445265 NFATC1O95644 943 aa16.14■□□□□ 0.17
TCOF1-206ENST00000445265 TFPTP0C1Z6 253 aa16.14■□□□□ 0.17
TCOF1-206ENST00000445265 HSD3B1P14060 373 aa16.14■□□□□ 0.17
TCOF1-206ENST00000445265 ZNF26P17031 533 aaPredicted RBP16.14■□□□□ 0.17
TCOF1-206ENST00000445265 CD247P20963 164 aa16.14■□□□□ 0.17
TCOF1-206ENST00000445265 HSD3B2P26439 372 aa16.14■□□□□ 0.17
TCOF1-206ENST00000445265 GKP32189 559 aa16.14■□□□□ 0.17
TCOF1-206ENST00000445265 PRR5P85299 388 aa16.14■□□□□ 0.17
TCOF1-206ENST00000445265 ARSIQ5FYB1 569 aa16.14■□□□□ 0.17
TCOF1-206ENST00000445265 FUNDC2Q9BWH2 189 aa16.14■□□□□ 0.17
TCOF1-206ENST00000445265 EHD1Q9H4M9 534 aa16.14■□□□□ 0.17
TCOF1-206ENST00000445265 FAM86C2PA6NEL3 165 aa16.14■□□□□ 0.17
TCOF1-206ENST00000445265 RPS3P23396 243 aaKnown RBP eCLIP16.14■□□□□ 0.17
TCOF1-206ENST00000445265 HOXC13P31276 330 aa16.14■□□□□ 0.17
TCOF1-206ENST00000445265 DDI2Q5TDH0 399 aa16.14■□□□□ 0.17
TCOF1-206ENST00000445265 ZNF598Q86UK7 904 aaKnown RBP16.14■□□□□ 0.17
TCOF1-206ENST00000445265 RETREG3Q86VR2 466 aa16.14■□□□□ 0.17
TCOF1-206ENST00000445265 TTC9BQ8N6N2 239 aa16.14■□□□□ 0.17
TCOF1-206ENST00000445265 KLHL6Q8WZ60 621 aa16.14■□□□□ 0.17
TCOF1-206ENST00000445265 RPRD1BQ9NQG5 326 aaKnown RBP16.14■□□□□ 0.17
TCOF1-206ENST00000445265 SRRDQ9UH36 339 aa16.14■□□□□ 0.17
TCOF1-206ENST00000445265 MKLN1Q9UL63 735 aa16.14■□□□□ 0.17
TCOF1-206ENST00000445265 SNX7Q9UNH6 387 aa16.14■□□□□ 0.17
TCOF1-206ENST00000445265 HCN4Q9Y3Q4 1203 aa16.14■□□□□ 0.17
TCOF1-206ENST00000445265 H3BMQ9 156 aa16.14■□□□□ 0.17
TCOF1-206ENST00000445265 GABBR2O75899 941 aa16.14■□□□□ 0.17
TCOF1-206ENST00000445265 ATXN1LP0C7T5 689 aaKnown RBP16.14■□□□□ 0.17
TCOF1-206ENST00000445265 HSD17B2P37059 387 aa16.14■□□□□ 0.17
TCOF1-206ENST00000445265 METTL2BQ6P1Q9 378 aaKnown RBP16.14■□□□□ 0.17
TCOF1-206ENST00000445265 MACC1Q6ZN28 852 aa16.14■□□□□ 0.17
TCOF1-206ENST00000445265 SLC22A16Q86VW1 577 aa16.14■□□□□ 0.17
TCOF1-206ENST00000445265 LRRC17Q8N6Y2 441 aa16.14■□□□□ 0.17
TCOF1-206ENST00000445265 WFIKKN2Q8TEU8 576 aa16.14■□□□□ 0.17
TCOF1-206ENST00000445265 COG8Q96MW5 612 aa16.14■□□□□ 0.17
TCOF1-206ENST00000445265 SPATA9Q9BWV2 254 aa16.14■□□□□ 0.17
TCOF1-206ENST00000445265 EQTNQ9NQ60 294 aa16.14■□□□□ 0.17
TCOF1-206ENST00000445265 HEBP1Q9NRV9 189 aa16.14■□□□□ 0.17
TCOF1-206ENST00000445265 SNTG1Q9NSN8 517 aa16.14■□□□□ 0.17
TCOF1-206ENST00000445265 MRPS7Q9Y2R9 242 aaKnown RBP16.14■□□□□ 0.17
TCOF1-206ENST00000445265 RBMX2Q9Y388 322 aaKnown RBP16.14■□□□□ 0.17
TCOF1-206ENST00000445265 TMEM189-UBE2V1I3L0A0 370 aa16.13■□□□□ 0.17
TCOF1-206ENST00000445265 EIF3FO00303 357 aaPredicted RBP16.13■□□□□ 0.17
TCOF1-206ENST00000445265 PRDX3P30048 256 aaKnown RBP16.13■□□□□ 0.17
TCOF1-206ENST00000445265 CDKN1CP49918 316 aaPredicted RBP16.13■□□□□ 0.17
TCOF1-206ENST00000445265 XKP51811 444 aa16.13■□□□□ 0.17
TCOF1-206ENST00000445265 PIGFQ07326 219 aa16.13■□□□□ 0.17
TCOF1-206ENST00000445265 ZNF763Q0D2J5 394 aa16.13■□□□□ 0.17
TCOF1-206ENST00000445265 SF1Q15637 639 aaKnown RBP16.13■□□□□ 0.17
TCOF1-206ENST00000445265 KLHL12Q53G59 568 aa16.13■□□□□ 0.17
TCOF1-206ENST00000445265 FAM20CQ8IXL6 584 aa16.13■□□□□ 0.17
TCOF1-206ENST00000445265 PIANPQ8IYJ0 282 aa16.13■□□□□ 0.17
TCOF1-206ENST00000445265 NFKBIDQ8NI38 313 aa16.13■□□□□ 0.17
TCOF1-206ENST00000445265 PIGXQ8TBF5 258 aa16.13■□□□□ 0.17
TCOF1-206ENST00000445265 SLC39A13Q96H72 371 aa16.13■□□□□ 0.17
TCOF1-206ENST00000445265 NECTIN3Q9NQS3 549 aa16.13■□□□□ 0.17
TCOF1-206ENST00000445265 ERVK-18Q9QC07 812 aa16.13■□□□□ 0.17
TCOF1-206ENST00000445265 TMEM88BA6NKF7 163 aa16.13■□□□□ 0.17
TCOF1-206ENST00000445265 TLR4O00206 839 aa16.13■□□□□ 0.17
TCOF1-206ENST00000445265 FOXD2O60548 495 aaPredicted RBP16.13■□□□□ 0.17
TCOF1-206ENST00000445265 SOD2P04179 222 aa16.13■□□□□ 0.17
TCOF1-206ENST00000445265 GATMP50440 423 aa16.13■□□□□ 0.17
TCOF1-206ENST00000445265 CRISP3P54108 245 aa16.13■□□□□ 0.17
TCOF1-206ENST00000445265 MXD1Q05195 221 aa16.13■□□□□ 0.17
TCOF1-206ENST00000445265 PRAMEF14Q5SWL7 426 aa16.13■□□□□ 0.17
TCOF1-206ENST00000445265 PRAMEF13Q5VWM6 474 aa16.13■□□□□ 0.17
TCOF1-206ENST00000445265 CHPFQ8IZ52 775 aa16.13■□□□□ 0.17
TCOF1-206ENST00000445265 PELI3Q8N2H9 469 aa16.13■□□□□ 0.17
TCOF1-206ENST00000445265 OR5AK3PQ8NH89 298 aa16.13■□□□□ 0.17
TCOF1-206ENST00000445265 IL4I1Q96RQ9 567 aa16.13■□□□□ 0.17
TCOF1-206ENST00000445265 SPATA2Q9UM82 520 aa16.13■□□□□ 0.17
TCOF1-206ENST00000445265 GTF2A1LQ9UNN4 478 aa16.13■□□□□ 0.17
TCOF1-206ENST00000445265 SESN1Q9Y6P5 492 aa16.13■□□□□ 0.17
TCOF1-206ENST00000445265 ZNF195O14628 629 aa16.13■□□□□ 0.17
TCOF1-206ENST00000445265 GNAO1P09471 354 aa16.13■□□□□ 0.17
TCOF1-206ENST00000445265 JUPP14923 745 aa16.13■□□□□ 0.17
TCOF1-206ENST00000445265 IDSP22304 550 aa16.13■□□□□ 0.17
TCOF1-206ENST00000445265 STAT5AP42229 794 aa16.13■□□□□ 0.17
TCOF1-206ENST00000445265 LARS2Q15031 903 aaKnown RBP16.13■□□□□ 0.17
TCOF1-206ENST00000445265 TMEM44Q2T9K0 475 aa16.13■□□□□ 0.17
TCOF1-206ENST00000445265 RTP2Q5QGT7 225 aa16.13■□□□□ 0.17
TCOF1-206ENST00000445265 UTS2BQ765I0 119 aa16.13■□□□□ 0.17
TCOF1-206ENST00000445265 NUDT13Q86X67 352 aa16.13■□□□□ 0.17
TCOF1-206ENST00000445265 FAIMQ9NVQ4 179 aa16.13■□□□□ 0.17
TCOF1-206ENST00000445265 CACNB4O00305 520 aaPredicted RBP16.12■□□□□ 0.17
TCOF1-206ENST00000445265 PGRMC2O15173 223 aa16.12■□□□□ 0.17
TCOF1-206ENST00000445265 MT-ND2P03891 347 aa16.12■□□□□ 0.17
TCOF1-206ENST00000445265 H1F0P07305 194 aaKnown RBP16.12■□□□□ 0.17
TCOF1-206ENST00000445265 SLC5A2P31639 672 aa16.12■□□□□ 0.17
TCOF1-206ENST00000445265 BDKRB1P46663 353 aa16.12■□□□□ 0.17
TCOF1-206ENST00000445265 KHKP50053 298 aa16.12■□□□□ 0.17
TCOF1-206ENST00000445265 RPS13P62277 151 aaKnown RBP16.12■□□□□ 0.17
TCOF1-206ENST00000445265 CD47Q08722 323 aa16.12■□□□□ 0.17
TCOF1-206ENST00000445265 AMZ2Q86W34 360 aa16.12■□□□□ 0.17
TCOF1-206ENST00000445265 MS4A4AQ96JQ5 239 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms