RNA–Protein interactions for RNA: ENST00000444814.2

LTBR-204, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 1,553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-204ENST00000444814 FARSAQ9Y285 508 aaKnown RBP11.72□□□□□ -0.53
LTBR-204ENST00000444814 ANGPTL3Q9Y5C1 460 aa11.72□□□□□ -0.53
LTBR-204ENST00000444814 PCDHGA4Q9Y5G9 962 aa11.72□□□□□ -0.53
LTBR-204ENST00000444814 KIF26BQ2KJY2 2108 aa11.72□□□□□ -0.53
LTBR-204ENST00000444814 URB1O60287 2271 aaKnown RBP11.71□□□□□ -0.53
LTBR-204ENST00000444814 LOC101059948A0A1B0GTJ6 334 aa11.71□□□□□ -0.53
LTBR-204ENST00000444814 TRBC2A0A5B9 178 aa11.71□□□□□ -0.53
LTBR-204ENST00000444814 NCF1BA6NI72 391 aaPredicted RBP11.71□□□□□ -0.53
LTBR-204ENST00000444814 EIF4E1BA6NMX2 242 aaKnown RBP11.71□□□□□ -0.53
LTBR-204ENST00000444814 NCF1CA8MVU1 366 aaPredicted RBP11.71□□□□□ -0.53
LTBR-204ENST00000444814 TRIM49D1C9J1S8 452 aa11.71□□□□□ -0.53
LTBR-204ENST00000444814 H0YGG7 62 aa11.71□□□□□ -0.53
LTBR-204ENST00000444814 CTSVO60911 334 aa11.71□□□□□ -0.53
LTBR-204ENST00000444814 SMIM24O75264 130 aa11.71□□□□□ -0.53
LTBR-204ENST00000444814 ALBP02768 609 aa11.71□□□□□ -0.53
LTBR-204ENST00000444814 CDH1P12830 882 aa11.71□□□□□ -0.53
LTBR-204ENST00000444814 GFAPP14136 432 aa11.71□□□□□ -0.53
LTBR-204ENST00000444814 NCF1P14598 390 aaPredicted RBP11.71□□□□□ -0.53
LTBR-204ENST00000444814 NPPBP16860 134 aa11.71□□□□□ -0.53
LTBR-204ENST00000444814 RORAP35398 523 aa11.71□□□□□ -0.53
LTBR-204ENST00000444814 AVPR1BP47901 424 aa11.71□□□□□ -0.53
LTBR-204ENST00000444814 ARF3P61204 181 aaPredicted RBP11.71□□□□□ -0.53
LTBR-204ENST00000444814 CDC16Q13042 620 aa11.71□□□□□ -0.53
LTBR-204ENST00000444814 HIST2H2ACQ16777 129 aaPredicted RBP11.71□□□□□ -0.53
LTBR-204ENST00000444814 NKAIN1Q4KMZ8 207 aa11.71□□□□□ -0.53
LTBR-204ENST00000444814 HIST2H2AA3Q6FI13 130 aa11.71□□□□□ -0.53
LTBR-204ENST00000444814 ADGRD1Q6QNK2 874 aa11.71□□□□□ -0.53
LTBR-204ENST00000444814 TIFABQ6ZNK6 161 aa11.71□□□□□ -0.53
LTBR-204ENST00000444814 TTLL10Q6ZVT0 673 aa11.71□□□□□ -0.53
LTBR-204ENST00000444814 RAB43Q86YS6 212 aa11.71□□□□□ -0.53
LTBR-204ENST00000444814 KLHDC8AQ8IYD2 350 aa11.71□□□□□ -0.53
LTBR-204ENST00000444814 LSM14AQ8ND56 463 aaKnown RBP11.71□□□□□ -0.53
LTBR-204ENST00000444814 TRPV3Q8NET8 790 aa11.71□□□□□ -0.53
LTBR-204ENST00000444814 DCAKDQ8WVC6 231 aa11.71□□□□□ -0.53
LTBR-204ENST00000444814 THAP4Q8WY91 577 aa11.71□□□□□ -0.53
LTBR-204ENST00000444814 EXT2Q93063 718 aa11.71□□□□□ -0.53
LTBR-204ENST00000444814 UBE2E3Q969T4 207 aa11.71□□□□□ -0.53
LTBR-204ENST00000444814 ISL2Q96A47 359 aa11.71□□□□□ -0.53
LTBR-204ENST00000444814 UBL7Q96S82 380 aaPredicted RBP11.71□□□□□ -0.53
LTBR-204ENST00000444814 KRTAP3-3Q9BYR6 98 aa11.71□□□□□ -0.53
LTBR-204ENST00000444814 KRTAP3-2Q9BYR7 98 aa11.71□□□□□ -0.53
LTBR-204ENST00000444814 CHST8Q9H2A9 424 aa11.71□□□□□ -0.53
LTBR-204ENST00000444814 CPNE5Q9HCH3 593 aa11.71□□□□□ -0.53
LTBR-204ENST00000444814 OPTCQ9UBM4 332 aa11.71□□□□□ -0.53
LTBR-204ENST00000444814 TPRP12270 2363 aaKnown RBP11.71□□□□□ -0.53
LTBR-204ENST00000444814 ERVH48-1M5A8F1 160 aa11.71□□□□□ -0.54
LTBR-204ENST00000444814 CREG1O75629 220 aa11.71□□□□□ -0.54
LTBR-204ENST00000444814 ALDOAP04075 364 aaKnown RBP11.71□□□□□ -0.54
LTBR-204ENST00000444814 FAM153BP0C7A2 387 aa11.71□□□□□ -0.54
LTBR-204ENST00000444814 TAC1P20366 129 aa11.71□□□□□ -0.54
LTBR-204ENST00000444814 AHRP35869 848 aa11.71□□□□□ -0.54
LTBR-204ENST00000444814 GGT5P36269 586 aa11.71□□□□□ -0.54
LTBR-204ENST00000444814 CSNK1G2P78368 415 aa11.71□□□□□ -0.54
LTBR-204ENST00000444814 OCA2Q04671 838 aa11.71□□□□□ -0.54
LTBR-204ENST00000444814 IFFO1Q0D2I5 559 aa11.71□□□□□ -0.54
LTBR-204ENST00000444814 FAM53BQ14153 422 aa11.71□□□□□ -0.54
LTBR-204ENST00000444814 NCF4Q15080 339 aa11.71□□□□□ -0.54
LTBR-204ENST00000444814 PDK4Q16654 411 aa11.71□□□□□ -0.54
LTBR-204ENST00000444814 FAM153CQ494X1 144 aa11.71□□□□□ -0.54
LTBR-204ENST00000444814 FBXO42Q6P3S6 717 aa11.71□□□□□ -0.54
LTBR-204ENST00000444814 ZNF517Q6ZMY9 492 aaPredicted RBP11.71□□□□□ -0.54
LTBR-204ENST00000444814 TMPRSS11BQ86T26 416 aa11.71□□□□□ -0.54
LTBR-204ENST00000444814 ASPGQ86U10 573 aa11.71□□□□□ -0.54
LTBR-204ENST00000444814 ISCA2Q86U28 154 aa11.71□□□□□ -0.54
LTBR-204ENST00000444814 RIBC1Q8N443 379 aaPredicted RBP11.71□□□□□ -0.54
LTBR-204ENST00000444814 SPATA6LQ8N4H0 392 aa11.71□□□□□ -0.54
LTBR-204ENST00000444814 SNX31Q8N9S9 440 aa11.71□□□□□ -0.54
LTBR-204ENST00000444814 MFSD9Q8NBP5 474 aa11.71□□□□□ -0.54
LTBR-204ENST00000444814 KCTD4Q8WVF5 259 aa11.71□□□□□ -0.54
LTBR-204ENST00000444814 PYCR2Q96C36 320 aa11.71□□□□□ -0.54
LTBR-204ENST00000444814 NXNL1Q96CM4 212 aa11.71□□□□□ -0.54
LTBR-204ENST00000444814 WBP1Q96G27 269 aa11.71□□□□□ -0.54
LTBR-204ENST00000444814 OR2A5Q96R48 311 aa11.71□□□□□ -0.54
LTBR-204ENST00000444814 TXLNGYQ9BZA5 131 aa11.71□□□□□ -0.54
LTBR-204ENST00000444814 EHD1Q9H4M9 534 aa11.71□□□□□ -0.54
LTBR-204ENST00000444814 ANKZF1Q9H8Y5 726 aa11.71□□□□□ -0.54
LTBR-204ENST00000444814 POLHQ9Y253 713 aa11.71□□□□□ -0.54
LTBR-204ENST00000444814 SLC22A14Q9Y267 594 aa11.71□□□□□ -0.54
LTBR-204ENST00000444814 CEP295Q9C0D2 2601 aa11.71□□□□□ -0.54
LTBR-204ENST00000444814 ACACAQ13085 2346 aa11.7□□□□□ -0.54
LTBR-204ENST00000444814 A0A088AWK7 358 aa11.7□□□□□ -0.54
LTBR-204ENST00000444814 PCDH17O14917 1159 aa11.7□□□□□ -0.54
LTBR-204ENST00000444814 HAT1O14929 419 aa11.7□□□□□ -0.54
LTBR-204ENST00000444814 OR1F1O43749 312 aa11.7□□□□□ -0.54
LTBR-204ENST00000444814 CCNT2O60583 730 aaKnown RBP11.7□□□□□ -0.54
LTBR-204ENST00000444814 KLHL41O60662 606 aa11.7□□□□□ -0.54
LTBR-204ENST00000444814 ZNF10P21506 573 aaPredicted RBP11.7□□□□□ -0.54
LTBR-204ENST00000444814 FOLR3P41439 243 aa11.7□□□□□ -0.54
LTBR-204ENST00000444814 PGGT1BP53609 377 aa11.7□□□□□ -0.54
LTBR-204ENST00000444814 ALDH18A1P54886 795 aaKnown RBP11.7□□□□□ -0.54
LTBR-204ENST00000444814 PHEXP78562 749 aa11.7□□□□□ -0.54
LTBR-204ENST00000444814 CDC20Q12834 499 aa11.7□□□□□ -0.54
LTBR-204ENST00000444814 PWP1Q13610 501 aa11.7□□□□□ -0.54
LTBR-204ENST00000444814 RASA2Q15283 850 aa11.7□□□□□ -0.54
LTBR-204ENST00000444814 MLIPQ5VWP3 458 aa11.7□□□□□ -0.54
LTBR-204ENST00000444814 C16orf46Q6P387 395 aa11.7□□□□□ -0.54
LTBR-204ENST00000444814 NXPE4Q6UWF7 544 aa11.7□□□□□ -0.54
LTBR-204ENST00000444814 CROCCP2Q86T23 111 aa11.7□□□□□ -0.54
LTBR-204ENST00000444814 PARP9Q8IXQ6 854 aa11.7□□□□□ -0.54
LTBR-204ENST00000444814 LRRN4CLQ8ND94 238 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms