RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 NGFP01138 241 aa2.49□□□□□ -2.01
HMGB1P18-201ENST00000438801 POLBP06746 335 aa2.49□□□□□ -2.01
HMGB1P18-201ENST00000438801 SUPT20HL2P0C7V6 817 aa2.49□□□□□ -2.01
HMGB1P18-201ENST00000438801 CAPN3P20807 821 aa2.49□□□□□ -2.01
HMGB1P18-201ENST00000438801 GATA2P23769 480 aaPredicted RBP2.49□□□□□ -2.01
HMGB1P18-201ENST00000438801 MMP15P51511 669 aa2.49□□□□□ -2.01
HMGB1P18-201ENST00000438801 KRTAP12-2P59991 146 aa2.49□□□□□ -2.01
HMGB1P18-201ENST00000438801 KLRC3Q07444 240 aa2.49□□□□□ -2.01
HMGB1P18-201ENST00000438801 ENPP2Q13822 863 aa2.49□□□□□ -2.01
HMGB1P18-201ENST00000438801 GRB14Q14449 540 aa2.49□□□□□ -2.01
HMGB1P18-201ENST00000438801 KRTAP13-3Q3SY46 172 aa2.49□□□□□ -2.01
HMGB1P18-201ENST00000438801 C14orf28Q4W4Y0 310 aa2.49□□□□□ -2.01
HMGB1P18-201ENST00000438801 ARHGEF16Q5VV41 709 aa2.49□□□□□ -2.01
HMGB1P18-201ENST00000438801 CDC73Q6P1J9 531 aa2.49□□□□□ -2.01
HMGB1P18-201ENST00000438801 ZNF530Q6P9A1 599 aaPredicted RBP2.49□□□□□ -2.01
HMGB1P18-201ENST00000438801 PODNL1Q6PEZ8 512 aa2.49□□□□□ -2.01
HMGB1P18-201ENST00000438801 SDCCAG8Q86SQ7 713 aaPredicted RBP2.49□□□□□ -2.01
HMGB1P18-201ENST00000438801 PLD3Q8IV08 490 aa2.49□□□□□ -2.01
HMGB1P18-201ENST00000438801 RASGEF1CQ8N431 466 aa2.49□□□□□ -2.01
HMGB1P18-201ENST00000438801 NFKBIDQ8NI38 313 aa2.49□□□□□ -2.01
HMGB1P18-201ENST00000438801 KCNE4Q8WWG9 221 aa2.49□□□□□ -2.01
HMGB1P18-201ENST00000438801 SMPDL3BQ92485 455 aa2.49□□□□□ -2.01
HMGB1P18-201ENST00000438801 MMABQ96EY8 250 aaPredicted RBP2.49□□□□□ -2.01
HMGB1P18-201ENST00000438801 GIMAP5Q96F15 307 aa2.49□□□□□ -2.01
HMGB1P18-201ENST00000438801 SLC47A1Q96FL8 570 aa2.49□□□□□ -2.01
HMGB1P18-201ENST00000438801 UBXN10Q96LJ8 280 aa2.49□□□□□ -2.01
HMGB1P18-201ENST00000438801 ZNF300Q96RE9 604 aaPredicted RBP2.49□□□□□ -2.01
HMGB1P18-201ENST00000438801 NR1H4Q96RI1 486 aaPredicted RBP2.49□□□□□ -2.01
HMGB1P18-201ENST00000438801 RPS6KC1Q96S38 1066 aa2.49□□□□□ -2.01
HMGB1P18-201ENST00000438801 NUSAP1Q9BXS6 441 aaKnown RBP2.49□□□□□ -2.01
HMGB1P18-201ENST00000438801 CHMP4AQ9BY43 222 aa2.49□□□□□ -2.01
HMGB1P18-201ENST00000438801 FGFBP2Q9BYJ0 223 aa2.49□□□□□ -2.01
HMGB1P18-201ENST00000438801 COQ3Q9NZJ6 369 aa2.49□□□□□ -2.01
HMGB1P18-201ENST00000438801 CNOT8Q9UFF9 292 aaKnown RBP2.49□□□□□ -2.01
HMGB1P18-201ENST00000438801 NOL12Q9UGY1 213 aaKnown RBP eCLIP2.49□□□□□ -2.01
HMGB1P18-201ENST00000438801 NDRG2Q9UN36 371 aaKnown RBP2.49□□□□□ -2.01
HMGB1P18-201ENST00000438801 RABGAP1Q9Y3P9 1069 aa2.49□□□□□ -2.01
HMGB1P18-201ENST00000438801 ATAD5Q96QE3 1844 aa2.49□□□□□ -2.01
HMGB1P18-201ENST00000438801 MYH15Q9Y2K3 1946 aa2.48□□□□□ -2.01
HMGB1P18-201ENST00000438801 CHD3Q12873 2000 aaKnown RBP2.48□□□□□ -2.01
HMGB1P18-201ENST00000438801 TEX13DA0A0J9YY54 714 aaPredicted RBP2.48□□□□□ -2.01
HMGB1P18-201ENST00000438801 A0A1W2PRG0 241 aa2.48□□□□□ -2.01
HMGB1P18-201ENST00000438801 PHF1O43189 567 aaPredicted RBP2.48□□□□□ -2.01
HMGB1P18-201ENST00000438801 AP2A2O94973 939 aa2.48□□□□□ -2.01
HMGB1P18-201ENST00000438801 RAF1P04049 648 aa2.48□□□□□ -2.01
HMGB1P18-201ENST00000438801 ICAM1P05362 532 aa2.48□□□□□ -2.01
HMGB1P18-201ENST00000438801 HSD3B1P14060 373 aa2.48□□□□□ -2.01
HMGB1P18-201ENST00000438801 CEBPBP17676 345 aa2.48□□□□□ -2.01
HMGB1P18-201ENST00000438801 NFKBIAP25963 317 aa2.48□□□□□ -2.01
HMGB1P18-201ENST00000438801 SHC1P29353 583 aa2.48□□□□□ -2.01
HMGB1P18-201ENST00000438801 CEACAM8P31997 349 aaPredicted RBP2.48□□□□□ -2.01
HMGB1P18-201ENST00000438801 PTGER4P35408 488 aa2.48□□□□□ -2.01
HMGB1P18-201ENST00000438801 F2RL1P55085 397 aa2.48□□□□□ -2.01
HMGB1P18-201ENST00000438801 SNX16P57768 344 aa2.48□□□□□ -2.01
HMGB1P18-201ENST00000438801 CD81P60033 236 aa2.48□□□□□ -2.01
HMGB1P18-201ENST00000438801 CCNA1P78396 465 aa2.48□□□□□ -2.01
HMGB1P18-201ENST00000438801 CTU2Q2VPK5 515 aaKnown RBP2.48□□□□□ -2.01
HMGB1P18-201ENST00000438801 TCTEX1D4Q5JR98 221 aa2.48□□□□□ -2.01
HMGB1P18-201ENST00000438801 C1orf141Q5JVX7 400 aa2.48□□□□□ -2.01
HMGB1P18-201ENST00000438801 SUSD4Q5VX71 490 aa2.48□□□□□ -2.01
HMGB1P18-201ENST00000438801 BSPRYQ5W0U4 402 aa2.48□□□□□ -2.01
HMGB1P18-201ENST00000438801 DOK6Q6PKX4 331 aa2.48□□□□□ -2.01
HMGB1P18-201ENST00000438801 CXCL17Q6UXB2 119 aa2.48□□□□□ -2.01
HMGB1P18-201ENST00000438801 CYP26C1Q6V0L0 522 aa2.48□□□□□ -2.01
HMGB1P18-201ENST00000438801 Q6ZSR9 355 aa2.48□□□□□ -2.01
HMGB1P18-201ENST00000438801 TPRG1Q6ZUI0 275 aa2.48□□□□□ -2.01
HMGB1P18-201ENST00000438801 NAXDQ8IW45 347 aa2.48□□□□□ -2.01
HMGB1P18-201ENST00000438801 CASP10Q92851 521 aa2.48□□□□□ -2.01
HMGB1P18-201ENST00000438801 PKP2Q99959 881 aa2.48□□□□□ -2.01
HMGB1P18-201ENST00000438801 ALDH8A1Q9H2A2 487 aaPredicted RBP2.48□□□□□ -2.01
HMGB1P18-201ENST00000438801 PCDHB16Q9NRJ7 776 aa2.48□□□□□ -2.01
HMGB1P18-201ENST00000438801 FAM120CQ9NX05 1096 aaKnown RBP2.48□□□□□ -2.01
HMGB1P18-201ENST00000438801 CWC15Q9P013 229 aaKnown RBP2.48□□□□□ -2.01
HMGB1P18-201ENST00000438801 TMEM184BQ9Y519 407 aaPredicted RBP2.48□□□□□ -2.01
HMGB1P18-201ENST00000438801 CYP46A1Q9Y6A2 500 aa2.48□□□□□ -2.01
HMGB1P18-201ENST00000438801 ROBO3Q96MS0 1386 aa2.48□□□□□ -2.01
HMGB1P18-201ENST00000438801 DIDO1Q9BTC0 2240 aaKnown RBP2.48□□□□□ -2.01
HMGB1P18-201ENST00000438801 PLXNA4Q9HCM2 1894 aa2.48□□□□□ -2.01
HMGB1P18-201ENST00000438801 NUP98P52948 1817 aa2.47□□□□□ -2.01
HMGB1P18-201ENST00000438801 MAP3K15Q6ZN16 1313 aa2.47□□□□□ -2.01
HMGB1P18-201ENST00000438801 CENPJQ9HC77 1338 aaPredicted RBP2.47□□□□□ -2.01
HMGB1P18-201ENST00000438801 IGHV4-4A0A075B6R2 117 aa2.47□□□□□ -2.01
HMGB1P18-201ENST00000438801 CCDC196A0A1B0GTZ2 297 aa2.47□□□□□ -2.01
HMGB1P18-201ENST00000438801 PAGE4O60829 102 aa2.47□□□□□ -2.01
HMGB1P18-201ENST00000438801 EDN1P05305 212 aa2.47□□□□□ -2.01
HMGB1P18-201ENST00000438801 FRMD6-AS1P0C7T7 363 aa2.47□□□□□ -2.01
HMGB1P18-201ENST00000438801 CD59P13987 128 aa2.47□□□□□ -2.01
HMGB1P18-201ENST00000438801 ACADSP16219 412 aa2.47□□□□□ -2.01
HMGB1P18-201ENST00000438801 ABCD3P28288 659 aa2.47□□□□□ -2.01
HMGB1P18-201ENST00000438801 TLX1P31314 330 aaPredicted RBP2.47□□□□□ -2.01
HMGB1P18-201ENST00000438801 THOP1P52888 689 aa2.47□□□□□ -2.01
HMGB1P18-201ENST00000438801 PSMC6P62333 389 aa2.47□□□□□ -2.01
HMGB1P18-201ENST00000438801 MRPS34P82930 218 aaKnown RBP2.47□□□□□ -2.01
HMGB1P18-201ENST00000438801 ZBED6P86452 979 aa2.47□□□□□ -2.01
HMGB1P18-201ENST00000438801 MFAP5Q13361 173 aa2.47□□□□□ -2.01
HMGB1P18-201ENST00000438801 BIRC2Q13490 618 aa2.47□□□□□ -2.01
HMGB1P18-201ENST00000438801 FRG1Q14331 258 aaKnown RBP2.47□□□□□ -2.01
HMGB1P18-201ENST00000438801 CCDC152Q4G0S7 254 aa2.47□□□□□ -2.01
HMGB1P18-201ENST00000438801 SLC9C2Q5TAH2 1124 aa2.47□□□□□ -2.01
HMGB1P18-201ENST00000438801 CCDC190Q86UF4 302 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms