RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 NPPBP16860 134 aa23.57■■□□□ 1.36
RAPGEF1-206ENST00000438647 PHBP35232 272 aa23.57■■□□□ 1.36
RAPGEF1-206ENST00000438647 HNMTP50135 292 aa23.57■■□□□ 1.36
RAPGEF1-206ENST00000438647 CSNK1G2P78368 415 aa23.57■■□□□ 1.36
RAPGEF1-206ENST00000438647 ATP1A4Q13733 1029 aa23.57■■□□□ 1.36
RAPGEF1-206ENST00000438647 NKG7Q16617 165 aa23.57■■□□□ 1.36
RAPGEF1-206ENST00000438647 NDUFA9Q16795 377 aa23.57■■□□□ 1.36
RAPGEF1-206ENST00000438647 HKDC1Q2TB90 917 aa23.57■■□□□ 1.36
RAPGEF1-206ENST00000438647 COX15Q7KZN9 410 aa23.57■■□□□ 1.36
RAPGEF1-206ENST00000438647 MRGPREQ86SM8 312 aa23.57■■□□□ 1.36
RAPGEF1-206ENST00000438647 CEP112Q8N8E3 955 aa23.57■■□□□ 1.36
RAPGEF1-206ENST00000438647 ZDHHC19Q8WVZ1 309 aaPredicted RBP23.57■■□□□ 1.36
RAPGEF1-206ENST00000438647 PYCR2Q96C36 320 aa23.57■■□□□ 1.36
RAPGEF1-206ENST00000438647 FER1L6-AS2Q96M78 137 aa23.57■■□□□ 1.36
RAPGEF1-206ENST00000438647 EGFL8Q99944 293 aa23.57■■□□□ 1.36
RAPGEF1-206ENST00000438647 TRIM55Q9BYV6 548 aa23.57■■□□□ 1.36
RAPGEF1-206ENST00000438647 CAB39LQ9H9S4 337 aa23.57■■□□□ 1.36
RAPGEF1-206ENST00000438647 ZNF71Q9NQZ8 489 aaPredicted RBP23.57■■□□□ 1.36
RAPGEF1-206ENST00000438647 MAU2Q9Y6X3 613 aa23.57■■□□□ 1.36
RAPGEF1-206ENST00000438647 DNAJB5O75953 348 aa23.56■■□□□ 1.36
RAPGEF1-206ENST00000438647 WISP3O95389 354 aaPredicted RBP23.56■■□□□ 1.36
RAPGEF1-206ENST00000438647 CCR8P51685 355 aa23.56■■□□□ 1.36
RAPGEF1-206ENST00000438647 RAB10P61026 200 aa23.56■■□□□ 1.36
RAPGEF1-206ENST00000438647 OCA2Q04671 838 aa23.56■■□□□ 1.36
RAPGEF1-206ENST00000438647 CHAF1BQ13112 559 aa23.56■■□□□ 1.36
RAPGEF1-206ENST00000438647 TSNQ15631 228 aaKnown RBP23.56■■□□□ 1.36
RAPGEF1-206ENST00000438647 ABHD11Q8NFV4 315 aa23.56■■□□□ 1.36
RAPGEF1-206ENST00000438647 DRC3Q9H069 523 aa23.56■■□□□ 1.36
RAPGEF1-206ENST00000438647 SYNPO2LQ9H987 977 aa23.56■■□□□ 1.36
RAPGEF1-206ENST00000438647 ZNF282Q9UDV7 671 aaPredicted RBP23.56■■□□□ 1.36
RAPGEF1-206ENST00000438647 DMGDHQ9UI17 866 aaKnown RBP23.56■■□□□ 1.36
RAPGEF1-206ENST00000438647 PCDHGA9Q9Y5G4 932 aaKnown RBP23.56■■□□□ 1.36
RAPGEF1-206ENST00000438647 MDC1Q14676 2089 aaKnown RBP23.56■■□□□ 1.36
RAPGEF1-206ENST00000438647 PHGDHO43175 533 aaKnown RBP23.55■■□□□ 1.36
RAPGEF1-206ENST00000438647 MED26O95402 600 aa23.55■■□□□ 1.36
RAPGEF1-206ENST00000438647 UMODP07911 640 aa23.55■■□□□ 1.36
RAPGEF1-206ENST00000438647 CCDC166P0CW27 439 aa23.55■■□□□ 1.36
RAPGEF1-206ENST00000438647 FBLP22087 321 aaKnown RBP23.55■■□□□ 1.36
RAPGEF1-206ENST00000438647 CCL11P51671 97 aa23.55■■□□□ 1.36
RAPGEF1-206ENST00000438647 ATP6V0D1P61421 351 aa23.55■■□□□ 1.36
RAPGEF1-206ENST00000438647 DSG2Q14126 1118 aa23.55■■□□□ 1.36
RAPGEF1-206ENST00000438647 FAM53BQ14153 422 aa23.55■■□□□ 1.36
RAPGEF1-206ENST00000438647 ZKSCAN8Q15776 578 aaPredicted RBP23.55■■□□□ 1.36
RAPGEF1-206ENST00000438647 ZXDCQ2QGD7 858 aaPredicted RBP23.55■■□□□ 1.36
RAPGEF1-206ENST00000438647 PRICKLE2Q7Z3G6 844 aa23.55■■□□□ 1.36
RAPGEF1-206ENST00000438647 RELL1Q8IUW5 271 aa23.55■■□□□ 1.36
RAPGEF1-206ENST00000438647 TBC1D19Q8N5T2 526 aa23.55■■□□□ 1.36
RAPGEF1-206ENST00000438647 CAMKVQ8NCB2 501 aa23.55■■□□□ 1.36
RAPGEF1-206ENST00000438647 VPS50Q96JG6 964 aa23.55■■□□□ 1.36
RAPGEF1-206ENST00000438647 SPSB2Q99619 263 aa23.55■■□□□ 1.36
RAPGEF1-206ENST00000438647 SLC25A23Q9BV35 468 aa23.55■■□□□ 1.36
RAPGEF1-206ENST00000438647 CTSFQ9UBX1 484 aa23.55■■□□□ 1.36
RAPGEF1-206ENST00000438647 SH2B3Q9UQQ2 575 aa23.55■■□□□ 1.36
RAPGEF1-206ENST00000438647 TP53TG5Q9Y2B4 290 aa23.55■■□□□ 1.36
RAPGEF1-206ENST00000438647 VSTM2BA6NLU5 285 aa23.54■■□□□ 1.36
RAPGEF1-206ENST00000438647 SLC28A2O43868 658 aa23.54■■□□□ 1.36
RAPGEF1-206ENST00000438647 MMP11P24347 488 aa23.54■■□□□ 1.36
RAPGEF1-206ENST00000438647 CSHL1Q14406 222 aa23.54■■□□□ 1.36
RAPGEF1-206ENST00000438647 SLMAPQ14BN4 828 aa23.54■■□□□ 1.36
RAPGEF1-206ENST00000438647 DTWD1Q8N5C7 304 aa23.54■■□□□ 1.36
RAPGEF1-206ENST00000438647 SLC5A11Q8WWX8 675 aa23.54■■□□□ 1.36
RAPGEF1-206ENST00000438647 IFT81Q8WYA0 676 aa23.54■■□□□ 1.36
RAPGEF1-206ENST00000438647 OR4K3Q96R72 315 aa23.54■■□□□ 1.36
RAPGEF1-206ENST00000438647 FMO2Q99518 471 aa23.54■■□□□ 1.36
RAPGEF1-206ENST00000438647 DYRK1BQ9Y463 629 aa23.54■■□□□ 1.36
RAPGEF1-206ENST00000438647 P2RX6O15547 441 aa23.53■■□□□ 1.36
RAPGEF1-206ENST00000438647 PLA2G2AP14555 144 aa23.53■■□□□ 1.36
RAPGEF1-206ENST00000438647 ATG14Q6ZNE5 492 aa23.53■■□□□ 1.36
RAPGEF1-206ENST00000438647 RAPH1Q70E73 1250 aa23.53■■□□□ 1.36
RAPGEF1-206ENST00000438647 VN1R4Q7Z5H5 301 aa23.53■■□□□ 1.36
RAPGEF1-206ENST00000438647 PPP1R32Q7Z5V6 425 aa23.53■■□□□ 1.36
RAPGEF1-206ENST00000438647 THOC6Q86W42 341 aaKnown RBP23.53■■□□□ 1.36
RAPGEF1-206ENST00000438647 PTRH1Q86Y79 214 aaKnown RBP23.53■■□□□ 1.36
RAPGEF1-206ENST00000438647 TCAIMQ8N3R3 496 aa23.53■■□□□ 1.36
RAPGEF1-206ENST00000438647 ARHGEF39Q8N4T4 335 aa23.53■■□□□ 1.36
RAPGEF1-206ENST00000438647 CLEC1AQ8NC01 280 aa23.53■■□□□ 1.36
RAPGEF1-206ENST00000438647 OR4K1Q8NGD4 311 aa23.53■■□□□ 1.36
RAPGEF1-206ENST00000438647 STT3BQ8TCJ2 826 aa23.53■■□□□ 1.36
RAPGEF1-206ENST00000438647 MIEF2Q96C03 454 aa23.53■■□□□ 1.36
RAPGEF1-206ENST00000438647 MMABQ96EY8 250 aaPredicted RBP23.53■■□□□ 1.36
RAPGEF1-206ENST00000438647 CYTH2Q99418 400 aa23.53■■□□□ 1.36
RAPGEF1-206ENST00000438647 SARGQ9BW04 601 aa23.53■■□□□ 1.36
RAPGEF1-206ENST00000438647 SOX17Q9H6I2 414 aaPredicted RBP23.53■■□□□ 1.36
RAPGEF1-206ENST00000438647 SEMA3GQ9NS98 782 aa23.53■■□□□ 1.36
RAPGEF1-206ENST00000438647 P4HTMQ9NXG6 502 aa23.53■■□□□ 1.36
RAPGEF1-206ENST00000438647 ANAPC2Q9UJX6 822 aa23.53■■□□□ 1.36
RAPGEF1-206ENST00000438647 KCNE2Q9Y6J6 123 aa23.53■■□□□ 1.36
RAPGEF1-206ENST00000438647 IGLV3-12A0A075B6K2 115 aa23.52■■□□□ 1.36
RAPGEF1-206ENST00000438647 FEZF1A0PJY2 475 aa23.52■■□□□ 1.36
RAPGEF1-206ENST00000438647 SUV39H1O43463 412 aa23.52■■□□□ 1.36
RAPGEF1-206ENST00000438647 FAM155BO75949 473 aa23.52■■□□□ 1.36
RAPGEF1-206ENST00000438647 SLC35G6P0C7Q6 338 aa23.52■■□□□ 1.36
RAPGEF1-206ENST00000438647 CRABP2P29373 138 aa23.52■■□□□ 1.36
RAPGEF1-206ENST00000438647 BCL6P41182 706 aa23.52■■□□□ 1.36
RAPGEF1-206ENST00000438647 AVPR1BP47901 424 aa23.52■■□□□ 1.36
RAPGEF1-206ENST00000438647 PGDP52209 483 aa23.52■■□□□ 1.36
RAPGEF1-206ENST00000438647 FOXL2P58012 376 aa23.52■■□□□ 1.36
RAPGEF1-206ENST00000438647 TGFBIQ15582 683 aa23.52■■□□□ 1.36
RAPGEF1-206ENST00000438647 ASB18Q6ZVZ8 466 aa23.52■■□□□ 1.36
RAPGEF1-206ENST00000438647 ASPGQ86U10 573 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms