RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 WDR20Q8TBZ3 569 aa11.42□□□□□ -0.58
CD44-209ENST00000433892 ASZ1Q8WWH4 475 aa11.42□□□□□ -0.58
CD44-209ENST00000433892 MAL2Q969L2 176 aa11.42□□□□□ -0.58
CD44-209ENST00000433892 FCRL1Q96LA6 429 aa11.42□□□□□ -0.58
CD44-209ENST00000433892 HERC2P3Q9BVR0 1158 aa11.42□□□□□ -0.58
CD44-209ENST00000433892 CPEB1Q9BZB8 566 aaKnown RBP11.42□□□□□ -0.58
CD44-209ENST00000433892 ASPSCR1Q9BZE9 553 aa11.42□□□□□ -0.58
CD44-209ENST00000433892 FAM120CQ9NX05 1096 aaKnown RBP11.42□□□□□ -0.58
CD44-209ENST00000433892 THUMPD1Q9NXG2 353 aaKnown RBP11.42□□□□□ -0.58
CD44-209ENST00000433892 SELENONQ9NZV5 590 aa11.42□□□□□ -0.58
CD44-209ENST00000433892 SH3GLB1Q9Y371 365 aa11.42□□□□□ -0.58
CD44-209ENST00000433892 OBSL1O75147 1896 aa11.41□□□□□ -0.58
CD44-209ENST00000433892 SERTM1A2A2V5 107 aa11.41□□□□□ -0.58
CD44-209ENST00000433892 ARHGEF33A8MVX0 844 aa11.41□□□□□ -0.58
CD44-209ENST00000433892 M0R3G1 203 aa11.41□□□□□ -0.58
CD44-209ENST00000433892 FAM20BO75063 409 aa11.41□□□□□ -0.58
CD44-209ENST00000433892 NTRK1P04629 796 aa11.41□□□□□ -0.58
CD44-209ENST00000433892 ACVR2AP27037 513 aa11.41□□□□□ -0.58
CD44-209ENST00000433892 CSTF3Q12996 717 aaKnown RBP11.41□□□□□ -0.58
CD44-209ENST00000433892 NAE1Q13564 534 aa11.41□□□□□ -0.58
CD44-209ENST00000433892 CLCA4Q14CN2 919 aa11.41□□□□□ -0.58
CD44-209ENST00000433892 MAD2L1BPQ15013 274 aaPredicted RBP11.41□□□□□ -0.58
CD44-209ENST00000433892 KIAA1614Q5VZ46 1190 aa11.41□□□□□ -0.58
CD44-209ENST00000433892 ZDHHC20Q5W0Z9 365 aa11.41□□□□□ -0.58
CD44-209ENST00000433892 ERICH5Q6P6B1 374 aa11.41□□□□□ -0.58
CD44-209ENST00000433892 HSD11B1LQ7Z5J1 315 aa11.41□□□□□ -0.58
CD44-209ENST00000433892 SNX29P2Q8IUI4 249 aa11.41□□□□□ -0.58
CD44-209ENST00000433892 LILRA3Q8N6C8 439 aaPredicted RBP11.41□□□□□ -0.58
CD44-209ENST00000433892 ZFP90Q8TF47 636 aa11.41□□□□□ -0.58
CD44-209ENST00000433892 DUSP26Q9BV47 211 aa11.41□□□□□ -0.58
CD44-209ENST00000433892 ALOXE3Q9BYJ1 711 aa11.41□□□□□ -0.58
CD44-209ENST00000433892 FAM83DQ9H4H8 585 aa11.41□□□□□ -0.58
CD44-209ENST00000433892 REEP1Q9H902 201 aa11.41□□□□□ -0.58
CD44-209ENST00000433892 SPATA6Q9NWH7 488 aaPredicted RBP11.41□□□□□ -0.58
CD44-209ENST00000433892 SLC25A13Q9UJS0 675 aa11.41□□□□□ -0.58
CD44-209ENST00000433892 FZD4Q9ULV1 537 aa11.41□□□□□ -0.58
CD44-209ENST00000433892 CCL26Q9Y258 94 aa11.41□□□□□ -0.58
CD44-209ENST00000433892 B3GNT3Q9Y2A9 372 aa11.41□□□□□ -0.58
CD44-209ENST00000433892 PCDHB11Q9Y5F2 797 aa11.41□□□□□ -0.58
CD44-209ENST00000433892 TRAV19A0A0A6YYK7 116 aa11.4□□□□□ -0.58
CD44-209ENST00000433892 GABRR3A8MPY1 467 aa11.4□□□□□ -0.58
CD44-209ENST00000433892 RGS10O43665 173 aa11.4□□□□□ -0.58
CD44-209ENST00000433892 PRMT3O60678 531 aa11.4□□□□□ -0.58
CD44-209ENST00000433892 ETV3P41162 512 aa11.4□□□□□ -0.58
CD44-209ENST00000433892 GSSP48637 474 aa11.4□□□□□ -0.58
CD44-209ENST00000433892 BCAP31P51572 246 aa11.4□□□□□ -0.58
CD44-209ENST00000433892 HNRNPFP52597 415 aaKnown RBP11.4□□□□□ -0.58
CD44-209ENST00000433892 CRYBA2P53672 197 aa11.4□□□□□ -0.58
CD44-209ENST00000433892 CXCR4P61073 352 aa11.4□□□□□ -0.58
CD44-209ENST00000433892 RPP38P78345 283 aaKnown RBP11.4□□□□□ -0.58
CD44-209ENST00000433892 CREMQ03060 361 aa11.4□□□□□ -0.58
CD44-209ENST00000433892 RELAQ04206 551 aa11.4□□□□□ -0.58
CD44-209ENST00000433892 NOGQ13253 232 aa11.4□□□□□ -0.58
CD44-209ENST00000433892 ZNF846Q147U1 533 aa11.4□□□□□ -0.58
CD44-209ENST00000433892 HKDC1Q2TB90 917 aa11.4□□□□□ -0.58
CD44-209ENST00000433892 GDPD4Q6W3E5 623 aa11.4□□□□□ -0.58
CD44-209ENST00000433892 GPR155Q7Z3F1 870 aa11.4□□□□□ -0.58
CD44-209ENST00000433892 TSPYL5Q86VY4 417 aaPredicted RBP11.4□□□□□ -0.58
CD44-209ENST00000433892 P2RY8Q86VZ1 359 aa11.4□□□□□ -0.58
CD44-209ENST00000433892 TMC8Q8IU68 726 aa11.4□□□□□ -0.58
CD44-209ENST00000433892 C1orf52Q8N6N3 182 aaKnown RBP11.4□□□□□ -0.58
CD44-209ENST00000433892 YIPF6Q96EC8 236 aa11.4□□□□□ -0.58
CD44-209ENST00000433892 SLC46A2Q9BY10 475 aa11.4□□□□□ -0.58
CD44-209ENST00000433892 HMG20AQ9NP66 347 aa11.4□□□□□ -0.58
CD44-209ENST00000433892 ERVW-1Q9UQF0 538 aa11.4□□□□□ -0.58
CD44-209ENST00000433892 RUVBL1Q9Y265 456 aaKnown RBP11.4□□□□□ -0.58
CD44-209ENST00000433892 HSPE1-MOB4S4R3N1 261 aa11.4□□□□□ -0.58
CD44-209ENST00000433892 MICAL3Q7RTP6 2002 aa11.4□□□□□ -0.58
CD44-209ENST00000433892 NEDD8-MDP1E9PL57 170 aa11.4□□□□□ -0.58
CD44-209ENST00000433892 SCAMP2O15127 329 aaKnown RBP11.4□□□□□ -0.58
CD44-209ENST00000433892 KPNA5O15131 536 aa11.4□□□□□ -0.58
CD44-209ENST00000433892 SLC22A1O15245 554 aa11.4□□□□□ -0.58
CD44-209ENST00000433892 GRM6O15303 877 aa11.4□□□□□ -0.58
CD44-209ENST00000433892 TGM5O43548 720 aa11.4□□□□□ -0.58
CD44-209ENST00000433892 PCDHGA12O60330 932 aa11.4□□□□□ -0.58
CD44-209ENST00000433892 NADKO95544 446 aaPredicted RBP11.4□□□□□ -0.58
CD44-209ENST00000433892 ANXA4P09525 319 aaPredicted RBP11.4□□□□□ -0.58
CD44-209ENST00000433892 KRT20P35900 424 aa11.4□□□□□ -0.58
CD44-209ENST00000433892 PREPP48147 710 aa11.4□□□□□ -0.58
CD44-209ENST00000433892 CD97P48960 835 aa11.4□□□□□ -0.58
CD44-209ENST00000433892 ST13P50502 369 aaKnown RBP11.4□□□□□ -0.58
CD44-209ENST00000433892 CASP9P55211 416 aa11.4□□□□□ -0.58
CD44-209ENST00000433892 ITGA1P56199 1179 aa11.4□□□□□ -0.58
CD44-209ENST00000433892 NCS1P62166 190 aa11.4□□□□□ -0.58
CD44-209ENST00000433892 POLR2LP62875 67 aaKnown RBP11.4□□□□□ -0.58
CD44-209ENST00000433892 RAE1P78406 368 aaKnown RBP11.4□□□□□ -0.58
CD44-209ENST00000433892 NPRL3Q12980 569 aa11.4□□□□□ -0.58
CD44-209ENST00000433892 PERM1Q5SV97 790 aa11.4□□□□□ -0.58
CD44-209ENST00000433892 SYT6Q5T7P8 510 aaPredicted RBP11.4□□□□□ -0.58
CD44-209ENST00000433892 CPTPQ5TA50 214 aa11.4□□□□□ -0.58
CD44-209ENST00000433892 AGTRAPQ6RW13 159 aa11.4□□□□□ -0.58
CD44-209ENST00000433892 SYNPOQ8N3V7 929 aa11.4□□□□□ -0.58
CD44-209ENST00000433892 GPR156Q8NFN8 814 aa11.4□□□□□ -0.58
CD44-209ENST00000433892 OR2A12Q8NGT7 310 aa11.4□□□□□ -0.58
CD44-209ENST00000433892 CLP1Q92989 425 aaKnown RBP11.4□□□□□ -0.58
CD44-209ENST00000433892 C7orf34Q96L11 122 aa11.4□□□□□ -0.58
CD44-209ENST00000433892 OR4K3Q96R72 315 aa11.4□□□□□ -0.58
CD44-209ENST00000433892 EMILIN2Q9BXX0 1053 aa11.4□□□□□ -0.58
CD44-209ENST00000433892 SGK2Q9HBY8 427 aa11.4□□□□□ -0.58
CD44-209ENST00000433892 ACOT13Q9NPJ3 140 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms