RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 BPHLQ86WA6 291 aaPredicted RBP3.65□□□□□ -1.82
SHPRH-205ENST00000433355 CBR4Q8N4T8 237 aa3.65□□□□□ -1.82
SHPRH-205ENST00000433355 OR4E2Q8NGC2 313 aa3.65□□□□□ -1.82
SHPRH-205ENST00000433355 FAM136AQ96C01 138 aa3.65□□□□□ -1.82
SHPRH-205ENST00000433355 MVB12AQ96EY5 273 aa3.65□□□□□ -1.82
SHPRH-205ENST00000433355 ZBTB45Q96K62 511 aaPredicted RBP3.65□□□□□ -1.82
SHPRH-205ENST00000433355 SLC6A7Q99884 636 aa3.65□□□□□ -1.82
SHPRH-205ENST00000433355 DOHHQ9BU89 302 aa3.65□□□□□ -1.82
SHPRH-205ENST00000433355 TRIM2Q9C040 744 aa3.65□□□□□ -1.82
SHPRH-205ENST00000433355 CXorf21Q9HAI6 301 aa3.65□□□□□ -1.82
SHPRH-205ENST00000433355 TRNAU1APQ9NX07 287 aaKnown RBP3.65□□□□□ -1.82
SHPRH-205ENST00000433355 SRPK3Q9UPE1 567 aa3.65□□□□□ -1.82
SHPRH-205ENST00000433355 SAMHD1Q9Y3Z3 626 aaKnown RBP3.65□□□□□ -1.82
SHPRH-205ENST00000433355 TLN2Q9Y4G6 2542 aa3.65□□□□□ -1.82
SHPRH-205ENST00000433355 COL6A6A6NMZ7 2263 aa3.65□□□□□ -1.82
SHPRH-205ENST00000433355 A0A075B6Q4 140 aa3.65□□□□□ -1.82
SHPRH-205ENST00000433355 A0A1B0GVI7 797 aa3.65□□□□□ -1.82
SHPRH-205ENST00000433355 GJB1P08034 283 aa3.65□□□□□ -1.82
SHPRH-205ENST00000433355 UQCRC2P22695 453 aa3.65□□□□□ -1.82
SHPRH-205ENST00000433355 BDNFP23560 247 aa3.65□□□□□ -1.82
SHPRH-205ENST00000433355 UGT1A5P35504 534 aa3.65□□□□□ -1.82
SHPRH-205ENST00000433355 DSTNP60981 165 aa3.65□□□□□ -1.82
SHPRH-205ENST00000433355 TRAF2Q12933 501 aa3.65□□□□□ -1.82
SHPRH-205ENST00000433355 KLHL12Q53G59 568 aa3.65□□□□□ -1.82
SHPRH-205ENST00000433355 KHDRBS2Q5VWX1 349 aaKnown RBP3.65□□□□□ -1.82
SHPRH-205ENST00000433355 SLC22A10Q63ZE4 541 aa3.65□□□□□ -1.82
SHPRH-205ENST00000433355 TLDC1Q6P9B6 456 aa3.65□□□□□ -1.82
SHPRH-205ENST00000433355 LARP4Q71RC2 724 aaKnown RBP eCLIP3.65□□□□□ -1.82
SHPRH-205ENST00000433355 NAT16Q8N8M0 369 aa3.65□□□□□ -1.82
SHPRH-205ENST00000433355 JOSD2Q8TAC2 188 aa3.65□□□□□ -1.82
SHPRH-205ENST00000433355 HMGCLL1Q8TB92 370 aa3.65□□□□□ -1.82
SHPRH-205ENST00000433355 SLC7A13Q8TCU3 470 aa3.65□□□□□ -1.82
SHPRH-205ENST00000433355 LBHD1Q9BQE6 289 aaPredicted RBP3.65□□□□□ -1.82
SHPRH-205ENST00000433355 CD244Q9BZW8 370 aa3.65□□□□□ -1.82
SHPRH-205ENST00000433355 H2AFY2Q9P0M6 372 aaPredicted RBP3.65□□□□□ -1.82
SHPRH-205ENST00000433355 ICKQ9UPZ9 632 aa3.65□□□□□ -1.82
SHPRH-205ENST00000433355 BTBD3Q9Y2F9 522 aa3.65□□□□□ -1.82
SHPRH-205ENST00000433355 MAFKO60675 156 aa3.65□□□□□ -1.82
SHPRH-205ENST00000433355 RPLP0P05388 317 aaKnown RBP3.65□□□□□ -1.82
SHPRH-205ENST00000433355 KITP10721 976 aa3.65□□□□□ -1.82
SHPRH-205ENST00000433355 GPX2P18283 190 aa3.65□□□□□ -1.82
SHPRH-205ENST00000433355 MAP2K4P45985 399 aa3.65□□□□□ -1.82
SHPRH-205ENST00000433355 CLK3P49761 638 aaKnown RBP3.65□□□□□ -1.82
SHPRH-205ENST00000433355 GDF10P55107 478 aa3.65□□□□□ -1.82
SHPRH-205ENST00000433355 MTM1Q13496 603 aa3.65□□□□□ -1.82
SHPRH-205ENST00000433355 E2F2Q14209 437 aa3.65□□□□□ -1.82
SHPRH-205ENST00000433355 CARD16Q5EG05 197 aa3.65□□□□□ -1.82
SHPRH-205ENST00000433355 HABP4Q5JVS0 413 aaKnown RBP3.65□□□□□ -1.82
SHPRH-205ENST00000433355 PIK3R6Q5UE93 754 aa3.65□□□□□ -1.82
SHPRH-205ENST00000433355 SLX4IPQ5VYV7 408 aa3.65□□□□□ -1.82
SHPRH-205ENST00000433355 ZNF786Q8N393 782 aa3.65□□□□□ -1.82
SHPRH-205ENST00000433355 RYBPQ8N488 228 aaPredicted RBP3.65□□□□□ -1.82
SHPRH-205ENST00000433355 PSD4Q8NDX1 1056 aa3.65□□□□□ -1.82
SHPRH-205ENST00000433355 OR4K2Q8NGD2 314 aa3.65□□□□□ -1.82
SHPRH-205ENST00000433355 RCN3Q96D15 328 aa3.65□□□□□ -1.82
SHPRH-205ENST00000433355 MRGPRX2Q96LB1 330 aa3.65□□□□□ -1.82
SHPRH-205ENST00000433355 NPLQ9BXD5 320 aaPredicted RBP3.65□□□□□ -1.82
SHPRH-205ENST00000433355 SUV39H2Q9H5I1 410 aa3.65□□□□□ -1.82
SHPRH-205ENST00000433355 TRPV4Q9HBA0 871 aa3.65□□□□□ -1.82
SHPRH-205ENST00000433355 TAS2R8Q9NYW2 309 aa3.65□□□□□ -1.82
SHPRH-205ENST00000433355 TMEM181Q9P2C4 612 aa3.65□□□□□ -1.82
SHPRH-205ENST00000433355 NUFIP1Q9UHK0 495 aaKnown RBP3.65□□□□□ -1.82
SHPRH-205ENST00000433355 RIPK3Q9Y572 518 aa3.65□□□□□ -1.82
SHPRH-205ENST00000433355 VWA8A3KMH1 1905 aa3.65□□□□□ -1.82
SHPRH-205ENST00000433355 HS6ST1O60243 411 aa3.65□□□□□ -1.82
SHPRH-205ENST00000433355 UGT1A4P22310 534 aa3.65□□□□□ -1.82
SHPRH-205ENST00000433355 UGT1A3P35503 534 aa3.65□□□□□ -1.82
SHPRH-205ENST00000433355 GSK3BP49841 420 aa3.65□□□□□ -1.82
SHPRH-205ENST00000433355 RAG2P55895 527 aa3.65□□□□□ -1.82
SHPRH-205ENST00000433355 YPEL5P62699 121 aa3.65□□□□□ -1.82
SHPRH-205ENST00000433355 TRAF3Q13114 568 aa3.65□□□□□ -1.82
SHPRH-205ENST00000433355 HNRNPA1L2Q32P51 320 aaKnown RBP3.65□□□□□ -1.82
SHPRH-205ENST00000433355 WASH2PQ6VEQ5 465 aa3.65□□□□□ -1.82
SHPRH-205ENST00000433355 NECAB2Q7Z6G3 386 aa3.65□□□□□ -1.82
SHPRH-205ENST00000433355 LACC1Q8IV20 430 aa3.65□□□□□ -1.82
SHPRH-205ENST00000433355 KLHDC8AQ8IYD2 350 aa3.65□□□□□ -1.82
SHPRH-205ENST00000433355 OR13J1Q8NGT2 312 aa3.65□□□□□ -1.82
SHPRH-205ENST00000433355 ARNTL2Q8WYA1 636 aa3.65□□□□□ -1.82
SHPRH-205ENST00000433355 USP7Q93009 1102 aa3.65□□□□□ -1.82
SHPRH-205ENST00000433355 WASH6PQ9NQA3 447 aa3.65□□□□□ -1.82
SHPRH-205ENST00000433355 EXOSC1Q9Y3B2 195 aaKnown RBP3.65□□□□□ -1.82
SHPRH-205ENST00000433355 ABCA1O95477 2261 aa3.65□□□□□ -1.83
SHPRH-205ENST00000433355 TISP43B9A030 160 aa3.65□□□□□ -1.83
SHPRH-205ENST00000433355 CLDN4O14493 209 aa3.65□□□□□ -1.83
SHPRH-205ENST00000433355 EDIL3O43854 480 aa3.65□□□□□ -1.83
SHPRH-205ENST00000433355 ADAMTS4O75173 837 aa3.65□□□□□ -1.83
SHPRH-205ENST00000433355 ECI2O75521 394 aa3.65□□□□□ -1.83
SHPRH-205ENST00000433355 SLCO2B1O94956 709 aa3.65□□□□□ -1.83
SHPRH-205ENST00000433355 CORO1AP31146 461 aaKnown RBP3.65□□□□□ -1.83
SHPRH-205ENST00000433355 CHI3L1P36222 383 aaPredicted RBP3.65□□□□□ -1.83
SHPRH-205ENST00000433355 RPS15AP62244 130 aaKnown RBP3.65□□□□□ -1.83
SHPRH-205ENST00000433355 PRKCQQ04759 706 aa3.65□□□□□ -1.83
SHPRH-205ENST00000433355 KCTD19Q17RG1 926 aaPredicted RBP3.65□□□□□ -1.83
SHPRH-205ENST00000433355 DENND6AQ8IWF6 608 aa3.65□□□□□ -1.83
SHPRH-205ENST00000433355 PIAS4Q8N2W9 510 aaPredicted RBP3.65□□□□□ -1.83
SHPRH-205ENST00000433355 FAM47BQ8NA70 645 aa3.65□□□□□ -1.83
SHPRH-205ENST00000433355 SMG7Q92540 1137 aaKnown RBP3.65□□□□□ -1.83
SHPRH-205ENST00000433355 DACH2Q96NX9 599 aa3.65□□□□□ -1.83
SHPRH-205ENST00000433355 CDCA4Q9BXL8 241 aa3.65□□□□□ -1.83
SHPRH-205ENST00000433355 C8orf33Q9H7E9 229 aaPredicted RBP3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms