RNA–Protein interactions for RNA: ENST00000428982.4

SYNGAP1-203, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-203ENST00000428982 IPCEF1Q8WWN9 437 aaPredicted RBP14.02□□□□□ -0.16
SYNGAP1-203ENST00000428982 PIP5K1AQ99755 562 aa14.02□□□□□ -0.16
SYNGAP1-203ENST00000428982 ARHGEF33A8MVX0 844 aa14.02□□□□□ -0.16
SYNGAP1-203ENST00000428982 CSTF2P33240 577 aaKnown RBP eCLIP14.02□□□□□ -0.16
SYNGAP1-203ENST00000428982 UGT2B10P36537 528 aa14.02□□□□□ -0.16
SYNGAP1-203ENST00000428982 PIK3CGP48736 1102 aa14.02□□□□□ -0.16
SYNGAP1-203ENST00000428982 HK3P52790 923 aa14.02□□□□□ -0.16
SYNGAP1-203ENST00000428982 MARC1Q5VT66 337 aa14.02□□□□□ -0.16
SYNGAP1-203ENST00000428982 LIPIQ6XZB0 460 aa14.02□□□□□ -0.16
SYNGAP1-203ENST00000428982 C17orf107Q6ZR85 190 aa14.02□□□□□ -0.16
SYNGAP1-203ENST00000428982 KDELC2Q7Z4H8 507 aa14.02□□□□□ -0.16
SYNGAP1-203ENST00000428982 SPATA19Q7Z5L4 167 aa14.02□□□□□ -0.16
SYNGAP1-203ENST00000428982 FCRL3Q96P31 734 aaPredicted RBP14.02□□□□□ -0.16
SYNGAP1-203ENST00000428982 SORBS1Q9BX66 1292 aaKnown RBP14.02□□□□□ -0.16
SYNGAP1-203ENST00000428982 MID1IP1Q9NPA3 183 aa14.02□□□□□ -0.16
SYNGAP1-203ENST00000428982 SLAMF7Q9NQ25 335 aa14.02□□□□□ -0.16
SYNGAP1-203ENST00000428982 UBA6A0AVT1 1052 aaPredicted RBP14.02□□□□□ -0.17
SYNGAP1-203ENST00000428982 LINC00862A6NCI5 91 aa14.02□□□□□ -0.17
SYNGAP1-203ENST00000428982 CAPNS1P04632 268 aa14.02□□□□□ -0.17
SYNGAP1-203ENST00000428982 USP17L7P0C7H9 530 aa14.02□□□□□ -0.17
SYNGAP1-203ENST00000428982 GSK3BP49841 420 aa14.02□□□□□ -0.17
SYNGAP1-203ENST00000428982 MGAT3Q09327 533 aa14.02□□□□□ -0.17
SYNGAP1-203ENST00000428982 MFSD13AQ14CX5 517 aa14.02□□□□□ -0.17
SYNGAP1-203ENST00000428982 TRNP1Q6NT89 227 aa14.02□□□□□ -0.17
SYNGAP1-203ENST00000428982 TCTE3Q8IZS6 198 aa14.02□□□□□ -0.17
SYNGAP1-203ENST00000428982 SLC34A3Q8N130 599 aa14.02□□□□□ -0.17
SYNGAP1-203ENST00000428982 CLRN3Q8NCR9 226 aa14.02□□□□□ -0.17
SYNGAP1-203ENST00000428982 MOCOSQ96EN8 888 aa14.02□□□□□ -0.17
SYNGAP1-203ENST00000428982 DUS3LQ96G46 650 aaKnown RBP14.02□□□□□ -0.17
SYNGAP1-203ENST00000428982 RADILQ96JH8 1075 aa14.02□□□□□ -0.17
SYNGAP1-203ENST00000428982 DCLRE1CQ96SD1 692 aaKnown RBP14.02□□□□□ -0.17
SYNGAP1-203ENST00000428982 LEF1Q9UJU2 399 aaPredicted RBP14.02□□□□□ -0.17
SYNGAP1-203ENST00000428982 MCM3APO60318 1980 aa14.02□□□□□ -0.17
SYNGAP1-203ENST00000428982 DCLK1O15075 740 aa14.01□□□□□ -0.17
SYNGAP1-203ENST00000428982 LCKP06239 509 aa14.01□□□□□ -0.17
SYNGAP1-203ENST00000428982 SCAPQ12770 1279 aa14.01□□□□□ -0.17
SYNGAP1-203ENST00000428982 PPP1R8Q12972 351 aaKnown RBP14.01□□□□□ -0.17
SYNGAP1-203ENST00000428982 RAB6CQ53S08 254 aa14.01□□□□□ -0.17
SYNGAP1-203ENST00000428982 LNX2Q8N448 690 aa14.01□□□□□ -0.17
SYNGAP1-203ENST00000428982 OR6M1Q8NGM8 313 aa14.01□□□□□ -0.17
SYNGAP1-203ENST00000428982 TRIM43Q96BQ3 446 aaPredicted RBP14.01□□□□□ -0.17
SYNGAP1-203ENST00000428982 PFDN5Q99471 154 aa14.01□□□□□ -0.17
SYNGAP1-203ENST00000428982 GPR63Q9BZJ6 419 aa14.01□□□□□ -0.17
SYNGAP1-203ENST00000428982 RAB6CQ9H0N0 254 aa14.01□□□□□ -0.17
SYNGAP1-203ENST00000428982 UFSP2Q9NUQ7 469 aa14.01□□□□□ -0.17
SYNGAP1-203ENST00000428982 ABCB8Q9NUT2 735 aa14.01□□□□□ -0.17
SYNGAP1-203ENST00000428982 CBY1Q9Y3M2 126 aa14.01□□□□□ -0.17
SYNGAP1-203ENST00000428982 CACNG2Q9Y698 323 aa14.01□□□□□ -0.17
SYNGAP1-203ENST00000428982 SSNA1O43805 119 aa14.01□□□□□ -0.17
SYNGAP1-203ENST00000428982 HMBSP08397 361 aa14.01□□□□□ -0.17
SYNGAP1-203ENST00000428982 CLTBP09497 229 aa14.01□□□□□ -0.17
SYNGAP1-203ENST00000428982 MAP2K3P46734 347 aa14.01□□□□□ -0.17
SYNGAP1-203ENST00000428982 PPP3CCP48454 512 aa14.01□□□□□ -0.17
SYNGAP1-203ENST00000428982 COL28A1Q2UY09 1125 aa14.01□□□□□ -0.17
SYNGAP1-203ENST00000428982 CEP76Q8TAP6 659 aa14.01□□□□□ -0.17
SYNGAP1-203ENST00000428982 EDEM1Q92611 657 aa14.01□□□□□ -0.17
SYNGAP1-203ENST00000428982 PABPC5Q96DU9 382 aaKnown RBP14.01□□□□□ -0.17
SYNGAP1-203ENST00000428982 TSGA13Q96PP4 275 aa14.01□□□□□ -0.17
SYNGAP1-203ENST00000428982 SLC2A13Q96QE2 648 aa14.01□□□□□ -0.17
SYNGAP1-203ENST00000428982 TINAGL1Q9GZM7 467 aaPredicted RBP14.01□□□□□ -0.17
SYNGAP1-203ENST00000428982 ABCC13Q9NSE7 274 aa14.01□□□□□ -0.17
SYNGAP1-203ENST00000428982 FBXL12Q9NXK8 326 aa14.01□□□□□ -0.17
SYNGAP1-203ENST00000428982 DNAJB9Q9UBS3 223 aa14.01□□□□□ -0.17
SYNGAP1-203ENST00000428982 NCKAP1Q9Y2A7 1128 aa14.01□□□□□ -0.17
SYNGAP1-203ENST00000428982 HMX2A2RU54 273 aa14.01□□□□□ -0.17
SYNGAP1-203ENST00000428982 CLDN24A6NM45 220 aa14.01□□□□□ -0.17
SYNGAP1-203ENST00000428982 PPEF2O14830 753 aa14.01□□□□□ -0.17
SYNGAP1-203ENST00000428982 AZIN1O14977 448 aa14.01□□□□□ -0.17
SYNGAP1-203ENST00000428982 MAGEA12P43365 314 aa14.01□□□□□ -0.17
SYNGAP1-203ENST00000428982 FOXM1Q08050 763 aa14.01□□□□□ -0.17
SYNGAP1-203ENST00000428982 CRELD1Q96HD1 420 aa14.01□□□□□ -0.17
SYNGAP1-203ENST00000428982 SMURF1Q9HCE7 757 aa14.01□□□□□ -0.17
SYNGAP1-203ENST00000428982 SLC9A8Q9Y2E8 581 aa14.01□□□□□ -0.17
SYNGAP1-203ENST00000428982 KIAA1217Q5T5P2 1943 aa14.01□□□□□ -0.17
SYNGAP1-203ENST00000428982 METTL21EPA6NDL7 271 aa14.01□□□□□ -0.17
SYNGAP1-203ENST00000428982 OR6C75A6NL08 312 aa14.01□□□□□ -0.17
SYNGAP1-203ENST00000428982 INMT-MINDY4F8WBC2 141 aa14.01□□□□□ -0.17
SYNGAP1-203ENST00000428982 CLDN5O00501 218 aa14.01□□□□□ -0.17
SYNGAP1-203ENST00000428982 PRMT5O14744 637 aaPredicted RBP14.01□□□□□ -0.17
SYNGAP1-203ENST00000428982 MATN3O15232 486 aa14.01□□□□□ -0.17
SYNGAP1-203ENST00000428982 ZNF623O75123 536 aa14.01□□□□□ -0.17
SYNGAP1-203ENST00000428982 LRG1P02750 347 aa14.01□□□□□ -0.17
SYNGAP1-203ENST00000428982 ITGB6P18564 788 aa14.01□□□□□ -0.17
SYNGAP1-203ENST00000428982 TGFBR1P36897 503 aa14.01□□□□□ -0.17
SYNGAP1-203ENST00000428982 TAS2R39P59534 338 aa14.01□□□□□ -0.17
SYNGAP1-203ENST00000428982 CSNK2BP67870 215 aa14.01□□□□□ -0.17
SYNGAP1-203ENST00000428982 DEFA6Q01524 100 aa14.01□□□□□ -0.17
SYNGAP1-203ENST00000428982 DSC1Q08554 894 aa14.01□□□□□ -0.17
SYNGAP1-203ENST00000428982 SMCO1Q147U7 214 aa14.01□□□□□ -0.17
SYNGAP1-203ENST00000428982 ZSWIM7Q19AV6 140 aa14.01□□□□□ -0.17
SYNGAP1-203ENST00000428982 ATP6AP1LQ52LC2 224 aa14.01□□□□□ -0.17
SYNGAP1-203ENST00000428982 Q5BKY6 102 aa14.01□□□□□ -0.17
SYNGAP1-203ENST00000428982 TIGD3Q6B0B8 471 aa14.01□□□□□ -0.17
SYNGAP1-203ENST00000428982 KDM1BQ8NB78 822 aa14.01□□□□□ -0.17
SYNGAP1-203ENST00000428982 KLHDC9Q8NEP7 349 aa14.01□□□□□ -0.17
SYNGAP1-203ENST00000428982 HEXDCQ8WVB3 486 aa14.01□□□□□ -0.17
SYNGAP1-203ENST00000428982 HTATIP2Q9BUP3 242 aa14.01□□□□□ -0.17
SYNGAP1-203ENST00000428982 CNPPD1Q9BV87 410 aa14.01□□□□□ -0.17
SYNGAP1-203ENST00000428982 OSBPL2Q9H1P3 480 aa14.01□□□□□ -0.17
SYNGAP1-203ENST00000428982 SNTG1Q9NSN8 517 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms