RNA–Protein interactions for RNA: ENST00000425231.2

CDCP1-202, Transcript of CUB domain containing protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDCP1, Length 1,416 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-202ENST00000425231 SRSF1Q07955 248 aaKnown RBP eCLIP20.47■□□□□ 0.87
CDCP1-202ENST00000425231 NAE1Q13564 534 aa20.47■□□□□ 0.87
CDCP1-202ENST00000425231 FAM53BQ14153 422 aa20.47■□□□□ 0.87
CDCP1-202ENST00000425231 RBBP7Q16576 425 aa20.47■□□□□ 0.87
CDCP1-202ENST00000425231 PLEKHN1Q494U1 663 aaPredicted RBP20.47■□□□□ 0.87
CDCP1-202ENST00000425231 ATG9BQ674R7 924 aa20.47■□□□□ 0.87
CDCP1-202ENST00000425231 VN1R4Q7Z5H5 301 aa20.47■□□□□ 0.87
CDCP1-202ENST00000425231 ATCAYQ86WG3 371 aa20.47■□□□□ 0.87
CDCP1-202ENST00000425231 PRSS58Q8IYP2 241 aa20.47■□□□□ 0.87
CDCP1-202ENST00000425231 SHANK1Q9Y566 2161 aa20.47■□□□□ 0.87
CDCP1-202ENST00000425231 A0A0A6YYC8 382 aaPredicted RBP20.46■□□□□ 0.87
CDCP1-202ENST00000425231 I3L1I5 382 aaPredicted RBP20.46■□□□□ 0.87
CDCP1-202ENST00000425231 FFAR3O14843 346 aa20.46■□□□□ 0.87
CDCP1-202ENST00000425231 GPR42O15529 346 aa20.46■□□□□ 0.87
CDCP1-202ENST00000425231 IPO13O94829 963 aaKnown RBP20.46■□□□□ 0.87
CDCP1-202ENST00000425231 HIST1H2AGP0C0S8 130 aaPredicted RBP20.46■□□□□ 0.87
CDCP1-202ENST00000425231 NPPBP16860 134 aa20.46■□□□□ 0.87
CDCP1-202ENST00000425231 HIST1H2ADP20671 130 aa20.46■□□□□ 0.87
CDCP1-202ENST00000425231 ITGA3P26006 1051 aa20.46■□□□□ 0.87
CDCP1-202ENST00000425231 MGAT5Q09328 741 aa20.46■□□□□ 0.87
CDCP1-202ENST00000425231 INPP5JQ15735 1006 aaPredicted RBP20.46■□□□□ 0.87
CDCP1-202ENST00000425231 TUBB8Q3ZCM7 444 aa20.46■□□□□ 0.87
CDCP1-202ENST00000425231 TMEM207Q6UWW9 146 aa20.46■□□□□ 0.87
CDCP1-202ENST00000425231 MMABQ96EY8 250 aaPredicted RBP20.46■□□□□ 0.87
CDCP1-202ENST00000425231 PDLIM5Q96HC4 596 aaKnown RBP20.46■□□□□ 0.87
CDCP1-202ENST00000425231 HIST1H2AHQ96KK5 128 aa20.46■□□□□ 0.87
CDCP1-202ENST00000425231 HIST1H2AJQ99878 128 aa20.46■□□□□ 0.87
CDCP1-202ENST00000425231 H2AFJQ9BTM1 129 aa20.46■□□□□ 0.87
CDCP1-202ENST00000425231 DRC3Q9H069 523 aa20.46■□□□□ 0.87
CDCP1-202ENST00000425231 SLAMF7Q9NQ25 335 aa20.46■□□□□ 0.87
CDCP1-202ENST00000425231 ZFATQ9P243 1243 aa20.46■□□□□ 0.87
CDCP1-202ENST00000425231 TRPC4Q9UBN4 977 aa20.46■□□□□ 0.87
CDCP1-202ENST00000425231 C3orf18Q9UK00 162 aa20.46■□□□□ 0.87
CDCP1-202ENST00000425231 MRPS2Q9Y399 296 aaKnown RBP20.46■□□□□ 0.87
CDCP1-202ENST00000425231 PRPF4O43172 522 aaKnown RBP eCLIP20.45■□□□□ 0.86
CDCP1-202ENST00000425231 CCND1P24385 295 aa20.45■□□□□ 0.86
CDCP1-202ENST00000425231 RPS15AP62244 130 aaKnown RBP20.45■□□□□ 0.86
CDCP1-202ENST00000425231 Q0VFX4 171 aa20.45■□□□□ 0.86
CDCP1-202ENST00000425231 UBAP2LQ14157 1087 aaKnown RBP20.45■□□□□ 0.86
CDCP1-202ENST00000425231 PRR30Q53SZ7 412 aaPredicted RBP20.45■□□□□ 0.86
CDCP1-202ENST00000425231 LCTLQ6UWM7 567 aa20.45■□□□□ 0.86
CDCP1-202ENST00000425231 ZC3HC1Q86WB0 502 aaKnown RBP20.45■□□□□ 0.86
CDCP1-202ENST00000425231 C17orf64Q86WR6 236 aa20.45■□□□□ 0.86
CDCP1-202ENST00000425231 PARP9Q8IXQ6 854 aa20.45■□□□□ 0.86
CDCP1-202ENST00000425231 EFCAB3Q8N7B9 438 aa20.45■□□□□ 0.86
CDCP1-202ENST00000425231 GALNT11Q8NCW6 608 aa20.45■□□□□ 0.86
CDCP1-202ENST00000425231 SPATA4Q8NEY3 305 aa20.45■□□□□ 0.86
CDCP1-202ENST00000425231 TGIF2Q9GZN2 237 aa20.45■□□□□ 0.86
CDCP1-202ENST00000425231 IKZF3Q9UKT9 509 aa20.45■□□□□ 0.86
CDCP1-202ENST00000425231 B3GNT3Q9Y2A9 372 aa20.45■□□□□ 0.86
CDCP1-202ENST00000425231 HECTD1Q9ULT8 2610 aa20.45■□□□□ 0.86
CDCP1-202ENST00000425231 LCMT2O60294 686 aaKnown RBP20.44■□□□□ 0.86
CDCP1-202ENST00000425231 VPS4BO75351 444 aa20.44■□□□□ 0.86
CDCP1-202ENST00000425231 STATHP02808 62 aa20.44■□□□□ 0.86
CDCP1-202ENST00000425231 AP1S2P56377 157 aa20.44■□□□□ 0.86
CDCP1-202ENST00000425231 SYT16Q17RD7 645 aa20.44■□□□□ 0.86
CDCP1-202ENST00000425231 DUPD1Q68J44 220 aa20.44■□□□□ 0.86
CDCP1-202ENST00000425231 OR56A3Q8NH54 315 aa20.44■□□□□ 0.86
CDCP1-202ENST00000425231 ALKBH8Q96BT7 664 aaKnown RBP20.44■□□□□ 0.86
CDCP1-202ENST00000425231 C8orf44Q96CB5 159 aa20.44■□□□□ 0.86
CDCP1-202ENST00000425231 TM4SF19Q96DZ7 209 aa20.44■□□□□ 0.86
CDCP1-202ENST00000425231 THAP11Q96EK4 314 aa20.44■□□□□ 0.86
CDCP1-202ENST00000425231 VPS50Q96JG6 964 aa20.44■□□□□ 0.86
CDCP1-202ENST00000425231 MACROD1Q9BQ69 325 aa20.44■□□□□ 0.86
CDCP1-202ENST00000425231 ERP44Q9BS26 406 aa20.44■□□□□ 0.86
CDCP1-202ENST00000425231 YIPF2Q9BWQ6 316 aa20.44■□□□□ 0.86
CDCP1-202ENST00000425231 MKKSQ9NPJ1 570 aaPredicted RBP20.44■□□□□ 0.86
CDCP1-202ENST00000425231 ARL15Q9NXU5 204 aa20.44■□□□□ 0.86
CDCP1-202ENST00000425231 VPS4AQ9UN37 437 aa20.44■□□□□ 0.86
CDCP1-202ENST00000425231 FEZF1A0PJY2 475 aa20.44■□□□□ 0.86
CDCP1-202ENST00000425231 IDSB3KWA1 339 aa20.44■□□□□ 0.86
CDCP1-202ENST00000425231 HPP00738 406 aa20.44■□□□□ 0.86
CDCP1-202ENST00000425231 ACPPP15309 386 aa20.44■□□□□ 0.86
CDCP1-202ENST00000425231 UQCRFS1P47985 274 aa20.44■□□□□ 0.86
CDCP1-202ENST00000425231 EMP2P54851 167 aa20.44■□□□□ 0.86
CDCP1-202ENST00000425231 NDUFA9Q16795 377 aa20.44■□□□□ 0.86
CDCP1-202ENST00000425231 CAPN13Q6MZZ7 669 aaPredicted RBP20.44■□□□□ 0.86
CDCP1-202ENST00000425231 SBSNQ6UWP8 590 aa20.44■□□□□ 0.86
CDCP1-202ENST00000425231 IGFL2Q6UWQ7 119 aa20.44■□□□□ 0.86
CDCP1-202ENST00000425231 STRA8Q7Z7C7 330 aa20.44■□□□□ 0.86
CDCP1-202ENST00000425231 SLC26A11Q86WA9 606 aa20.44■□□□□ 0.86
CDCP1-202ENST00000425231 ZBED8Q8IZ13 594 aa20.44■□□□□ 0.86
CDCP1-202ENST00000425231 BBOF1Q8ND07 529 aa20.44■□□□□ 0.86
CDCP1-202ENST00000425231 PYCR2Q96C36 320 aa20.44■□□□□ 0.86
CDCP1-202ENST00000425231 OR4K3Q96R72 315 aa20.44■□□□□ 0.86
CDCP1-202ENST00000425231 MCMBPQ9BTE3 642 aa20.44■□□□□ 0.86
CDCP1-202ENST00000425231 TRIM54Q9BYV2 358 aa20.44■□□□□ 0.86
CDCP1-202ENST00000425231 C14orf105Q9NVL8 296 aa20.44■□□□□ 0.86
CDCP1-202ENST00000425231 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.44■□□□□ 0.86
CDCP1-202ENST00000425231 FAM187AA6NFU0 413 aa20.43■□□□□ 0.86
CDCP1-202ENST00000425231 NDC80O14777 642 aa20.43■□□□□ 0.86
CDCP1-202ENST00000425231 ANXA5P08758 320 aa20.43■□□□□ 0.86
CDCP1-202ENST00000425231 CDH1P12830 882 aa20.43■□□□□ 0.86
CDCP1-202ENST00000425231 ZNF37AP17032 561 aaPredicted RBP20.43■□□□□ 0.86
CDCP1-202ENST00000425231 GNLYP22749 145 aa20.43■□□□□ 0.86
CDCP1-202ENST00000425231 BCL6P41182 706 aa20.43■□□□□ 0.86
CDCP1-202ENST00000425231 MAT1AQ00266 395 aaKnown RBP20.43■□□□□ 0.86
CDCP1-202ENST00000425231 TMEM214Q6NUQ4 689 aaKnown RBP20.43■□□□□ 0.86
CDCP1-202ENST00000425231 Q6ZS92 163 aa20.43■□□□□ 0.86
CDCP1-202ENST00000425231 PRSS41Q7RTY9 318 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms