RNA–Protein interactions for RNA: ENST00000425060.1

IGHV3-47-201, Transcript of immunoglobulin heavy variable 3-47 (pseudogene), humanhuman

BASIC

Gene IGHV3-47, Length 335 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-47-201ENST00000425060 STX2P32856 288 aa17.05■□□□□ 0.32
IGHV3-47-201ENST00000425060 SPRP35270 261 aaPredicted RBP17.05■□□□□ 0.32
IGHV3-47-201ENST00000425060 SLC12A2P55011 1212 aa17.05■□□□□ 0.32
IGHV3-47-201ENST00000425060 RPS15AP62244 130 aaKnown RBP17.05■□□□□ 0.32
IGHV3-47-201ENST00000425060 SNRPNP63162 240 aaKnown RBP17.05■□□□□ 0.32
IGHV3-47-201ENST00000425060 CHAF1BQ13112 559 aa17.05■□□□□ 0.32
IGHV3-47-201ENST00000425060 ATP1A4Q13733 1029 aa17.05■□□□□ 0.32
IGHV3-47-201ENST00000425060 USP10Q14694 798 aaKnown RBP17.05■□□□□ 0.32
IGHV3-47-201ENST00000425060 TSNQ15631 228 aaKnown RBP17.05■□□□□ 0.32
IGHV3-47-201ENST00000425060 GLE1Q53GS7 698 aaKnown RBP17.05■□□□□ 0.32
IGHV3-47-201ENST00000425060 PPP1R32Q7Z5V6 425 aa17.05■□□□□ 0.32
IGHV3-47-201ENST00000425060 MRGPREQ86SM8 312 aa17.05■□□□□ 0.32
IGHV3-47-201ENST00000425060 PPM1NQ8N819 430 aa17.05■□□□□ 0.32
IGHV3-47-201ENST00000425060 TMEM102Q8N9M5 508 aaPredicted RBP17.05■□□□□ 0.32
IGHV3-47-201ENST00000425060 KIF18AQ8NI77 898 aa17.05■□□□□ 0.32
IGHV3-47-201ENST00000425060 RERGQ96A58 199 aaPredicted RBP17.05■□□□□ 0.32
IGHV3-47-201ENST00000425060 ALKBH8Q96BT7 664 aaKnown RBP17.05■□□□□ 0.32
IGHV3-47-201ENST00000425060 THAP11Q96EK4 314 aa17.05■□□□□ 0.32
IGHV3-47-201ENST00000425060 MVB12AQ96EY5 273 aa17.05■□□□□ 0.32
IGHV3-47-201ENST00000425060 TSPAN17Q96FV3 270 aa17.05■□□□□ 0.32
IGHV3-47-201ENST00000425060 UBXN10Q96LJ8 280 aa17.05■□□□□ 0.32
IGHV3-47-201ENST00000425060 IP6K3Q96PC2 410 aa17.05■□□□□ 0.32
IGHV3-47-201ENST00000425060 ZNF304Q9HCX3 659 aa17.05■□□□□ 0.32
IGHV3-47-201ENST00000425060 ZNF71Q9NQZ8 489 aaPredicted RBP17.05■□□□□ 0.32
IGHV3-47-201ENST00000425060 CTNNAL1Q9UBT7 734 aa17.05■□□□□ 0.32
IGHV3-47-201ENST00000425060 CTSFQ9UBX1 484 aa17.05■□□□□ 0.32
IGHV3-47-201ENST00000425060 IGLV3-12A0A075B6K2 115 aa17.04■□□□□ 0.32
IGHV3-47-201ENST00000425060 MKRN2OSH3BPM6 223 aa17.04■□□□□ 0.32
IGHV3-47-201ENST00000425060 SUV39H1O43463 412 aa17.04■□□□□ 0.32
IGHV3-47-201ENST00000425060 PDGFAP04085 211 aa17.04■□□□□ 0.32
IGHV3-47-201ENST00000425060 CDH1P12830 882 aa17.04■□□□□ 0.32
IGHV3-47-201ENST00000425060 CD1DP15813 335 aa17.04■□□□□ 0.32
IGHV3-47-201ENST00000425060 STMN1P16949 149 aa17.04■□□□□ 0.32
IGHV3-47-201ENST00000425060 OTX2P32243 289 aa17.04■□□□□ 0.32
IGHV3-47-201ENST00000425060 NAB1Q13506 487 aa17.04■□□□□ 0.32
IGHV3-47-201ENST00000425060 FAM53BQ14153 422 aa17.04■□□□□ 0.32
IGHV3-47-201ENST00000425060 EFTUD2Q15029 972 aaKnown RBP eCLIP17.04■□□□□ 0.32
IGHV3-47-201ENST00000425060 UBAP2Q5T6F2 1119 aaKnown RBP17.04■□□□□ 0.32
IGHV3-47-201ENST00000425060 MED25Q71SY5 747 aa17.04■□□□□ 0.32
IGHV3-47-201ENST00000425060 ADAMTSL2Q86TH1 951 aa17.04■□□□□ 0.32
IGHV3-47-201ENST00000425060 SPATA6LQ8N4H0 392 aa17.04■□□□□ 0.32
IGHV3-47-201ENST00000425060 NACC2Q96BF6 587 aa17.04■□□□□ 0.32
IGHV3-47-201ENST00000425060 CABS1Q96KC9 395 aa17.04■□□□□ 0.32
IGHV3-47-201ENST00000425060 FUT8Q9BYC5 575 aa17.04■□□□□ 0.32
IGHV3-47-201ENST00000425060 NINJ2Q9NZG7 142 aa17.04■□□□□ 0.32
IGHV3-47-201ENST00000425060 TP53TG5Q9Y2B4 290 aa17.04■□□□□ 0.32
IGHV3-47-201ENST00000425060 PABPN1LA6NDY0 278 aaKnown RBP17.03■□□□□ 0.32
IGHV3-47-201ENST00000425060 ANXA5P08758 320 aa17.03■□□□□ 0.32
IGHV3-47-201ENST00000425060 CCDC166P0CW27 439 aa17.03■□□□□ 0.32
IGHV3-47-201ENST00000425060 NR1D1P20393 614 aa17.03■□□□□ 0.32
IGHV3-47-201ENST00000425060 MMP11P24347 488 aa17.03■□□□□ 0.32
IGHV3-47-201ENST00000425060 SLC26A3P40879 764 aa17.03■□□□□ 0.32
IGHV3-47-201ENST00000425060 BCL6P41182 706 aa17.03■□□□□ 0.32
IGHV3-47-201ENST00000425060 CSRP3P50461 194 aa17.03■□□□□ 0.32
IGHV3-47-201ENST00000425060 CCL11P51671 97 aa17.03■□□□□ 0.32
IGHV3-47-201ENST00000425060 RAB10P61026 200 aa17.03■□□□□ 0.32
IGHV3-47-201ENST00000425060 LACTB2Q53H82 288 aaPredicted RBP17.03■□□□□ 0.32
IGHV3-47-201ENST00000425060 PTRH1Q86Y79 214 aaKnown RBP17.03■□□□□ 0.32
IGHV3-47-201ENST00000425060 KLHDC8AQ8IYD2 350 aa17.03■□□□□ 0.32
IGHV3-47-201ENST00000425060 COL26A1Q96A83 441 aa17.03■□□□□ 0.32
IGHV3-47-201ENST00000425060 RHBDF1Q96CC6 855 aa17.03■□□□□ 0.32
IGHV3-47-201ENST00000425060 UNKQ9C0B0 810 aaKnown RBP17.03■□□□□ 0.32
IGHV3-47-201ENST00000425060 ACSS2Q9NR19 701 aa17.03■□□□□ 0.32
IGHV3-47-201ENST00000425060 NXT1Q9UKK6 140 aaKnown RBP17.03■□□□□ 0.32
IGHV3-47-201ENST00000425060 CDC14AQ9UNH5 594 aa17.03■□□□□ 0.32
IGHV3-47-201ENST00000425060 MRPS2Q9Y399 296 aaKnown RBP17.03■□□□□ 0.32
IGHV3-47-201ENST00000425060 PCDHGA9Q9Y5G4 932 aaKnown RBP17.03■□□□□ 0.32
IGHV3-47-201ENST00000425060 FEZF1A0PJY2 475 aa17.02■□□□□ 0.32
IGHV3-47-201ENST00000425060 HMX2A2RU54 273 aa17.02■□□□□ 0.32
IGHV3-47-201ENST00000425060 GMPRP36959 345 aa17.02■□□□□ 0.32
IGHV3-47-201ENST00000425060 SLC6A12P48065 614 aa17.02■□□□□ 0.32
IGHV3-47-201ENST00000425060 HNMTP50135 292 aa17.02■□□□□ 0.32
IGHV3-47-201ENST00000425060 CCR8P51685 355 aa17.02■□□□□ 0.32
IGHV3-47-201ENST00000425060 RRADP55042 308 aa17.02■□□□□ 0.32
IGHV3-47-201ENST00000425060 DSG2Q14126 1118 aa17.02■□□□□ 0.32
IGHV3-47-201ENST00000425060 TGFBIQ15582 683 aa17.02■□□□□ 0.32
IGHV3-47-201ENST00000425060 CATSPEREQ5SY80 951 aa17.02■□□□□ 0.32
IGHV3-47-201ENST00000425060 THOC6Q86W42 341 aaKnown RBP17.02■□□□□ 0.32
IGHV3-47-201ENST00000425060 AMER3Q8N944 861 aa17.02■□□□□ 0.32
IGHV3-47-201ENST00000425060 MFSD9Q8NBP5 474 aa17.02■□□□□ 0.32
IGHV3-47-201ENST00000425060 STT3BQ8TCJ2 826 aa17.02■□□□□ 0.32
IGHV3-47-201ENST00000425060 SLC5A11Q8WWX8 675 aa17.02■□□□□ 0.32
IGHV3-47-201ENST00000425060 NEIL2Q969S2 332 aa17.02■□□□□ 0.32
IGHV3-47-201ENST00000425060 TRIM44Q96DX7 344 aaPredicted RBP17.02■□□□□ 0.32
IGHV3-47-201ENST00000425060 MACROD1Q9BQ69 325 aa17.02■□□□□ 0.32
IGHV3-47-201ENST00000425060 SPNS1Q9H2V7 528 aa17.02■□□□□ 0.32
IGHV3-47-201ENST00000425060 SOX17Q9H6I2 414 aaPredicted RBP17.02■□□□□ 0.32
IGHV3-47-201ENST00000425060 P4HTMQ9NXG6 502 aa17.02■□□□□ 0.32
IGHV3-47-201ENST00000425060 ZNF282Q9UDV7 671 aaPredicted RBP17.02■□□□□ 0.32
IGHV3-47-201ENST00000425060 MTRF1LQ9UGC7 380 aaKnown RBP17.02■□□□□ 0.32
IGHV3-47-201ENST00000425060 SLC22A14Q9Y267 594 aa17.02■□□□□ 0.32
IGHV3-47-201ENST00000425060 SOCS6O14544 535 aa17.01■□□□□ 0.31
IGHV3-47-201ENST00000425060 STATHP02808 62 aa17.01■□□□□ 0.31
IGHV3-47-201ENST00000425060 ZGLP1P0C6A0 271 aa17.01■□□□□ 0.31
IGHV3-47-201ENST00000425060 SLC35E2BP0CK96 405 aa17.01■□□□□ 0.31
IGHV3-47-201ENST00000425060 FBLP22087 321 aaKnown RBP17.01■□□□□ 0.31
IGHV3-47-201ENST00000425060 KCNC1P48547 511 aa17.01■□□□□ 0.31
IGHV3-47-201ENST00000425060 ATP6V0D1P61421 351 aa17.01■□□□□ 0.31
IGHV3-47-201ENST00000425060 MEF2AQ02078 507 aaPredicted RBP17.01■□□□□ 0.31
IGHV3-47-201ENST00000425060 DLG1Q12959 904 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms